RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 DHX29Q7Z478 1369 aaKnown RBP6.66□□□□□ -1.34
PDLIM5-214ENST00000510099 CD109Q6YHK3 1445 aa6.66□□□□□ -1.34
PDLIM5-214ENST00000510099 MLH3Q9UHC1 1453 aa6.66□□□□□ -1.34
PDLIM5-214ENST00000510099 FRMPD1Q5SYB0 1578 aa6.65□□□□□ -1.34
PDLIM5-214ENST00000510099 NEURL4Q96JN8 1562 aa6.65□□□□□ -1.34
PDLIM5-214ENST00000510099 TRPM1Q7Z4N2 1603 aa6.65□□□□□ -1.34
PDLIM5-214ENST00000510099 E9PCH4 1651 aa6.65□□□□□ -1.34
PDLIM5-214ENST00000510099 KIDINS220Q9ULH0 1771 aa6.65□□□□□ -1.34
PDLIM5-214ENST00000510099 C11orf95C9JLR9 678 aaPredicted RBP6.65□□□□□ -1.34
PDLIM5-214ENST00000510099 PAK3O75914 559 aaPredicted RBP6.65□□□□□ -1.34
PDLIM5-214ENST00000510099 NPM1P06748 294 aaKnown RBP eCLIP6.65□□□□□ -1.34
PDLIM5-214ENST00000510099 PHF12Q96QT6 1004 aa6.65□□□□□ -1.34
PDLIM5-214ENST00000510099 ARID4BQ4LE39 1312 aaPredicted RBP6.65□□□□□ -1.35
PDLIM5-214ENST00000510099 EFCAB6Q5THR3 1501 aa6.65□□□□□ -1.35
PDLIM5-214ENST00000510099 HECW2Q9P2P5 1572 aa6.65□□□□□ -1.35
PDLIM5-214ENST00000510099 BCORL1Q5H9F3 1711 aa6.64□□□□□ -1.35
PDLIM5-214ENST00000510099 STAG3Q9UJ98 1225 aa6.64□□□□□ -1.35
PDLIM5-214ENST00000510099 ROCK2O75116 1388 aaKnown RBP6.64□□□□□ -1.35
PDLIM5-214ENST00000510099 KANK1Q14678 1352 aa6.64□□□□□ -1.35
PDLIM5-214ENST00000510099 POTEMA6NI47 508 aa6.63□□□□□ -1.35
PDLIM5-214ENST00000510099 POTEB2H3BUK9 544 aa6.63□□□□□ -1.35
PDLIM5-214ENST00000510099 GLI2P10070 1586 aa6.63□□□□□ -1.35
PDLIM5-214ENST00000510099 CLTCL1P53675 1640 aa6.63□□□□□ -1.35
PDLIM5-214ENST00000510099 SPHKAPQ2M3C7 1700 aa6.63□□□□□ -1.35
PDLIM5-214ENST00000510099 ZNF326Q5BKZ1 582 aaKnown RBP6.63□□□□□ -1.35
PDLIM5-214ENST00000510099 DCAF11Q8TEB1 546 aa6.63□□□□□ -1.35
PDLIM5-214ENST00000510099 MADDQ8WXG6 1647 aa6.63□□□□□ -1.35
PDLIM5-214ENST00000510099 ABCA6Q8N139 1617 aa6.62□□□□□ -1.35
PDLIM5-214ENST00000510099 MAP3K4Q9Y6R4 1608 aa6.62□□□□□ -1.35
PDLIM5-214ENST00000510099 COL17A1Q9UMD9 1497 aaPredicted RBP6.62□□□□□ -1.35
PDLIM5-214ENST00000510099 CARD11Q9BXL7 1154 aa6.62□□□□□ -1.35
PDLIM5-214ENST00000510099 CEP152O94986 1710 aa6.62□□□□□ -1.35
PDLIM5-214ENST00000510099 PPRC1Q5VV67 1664 aaKnown RBP6.61□□□□□ -1.35
PDLIM5-214ENST00000510099 RIMBP3CA6NJZ7 1639 aa6.61□□□□□ -1.35
PDLIM5-214ENST00000510099 RIMBP3BA6NNM3 1639 aa6.61□□□□□ -1.35
PDLIM5-214ENST00000510099 RIMBP3Q9UFD9 1639 aa6.61□□□□□ -1.35
PDLIM5-214ENST00000510099 DIP2CQ9Y2E4 1556 aa6.61□□□□□ -1.35
PDLIM5-214ENST00000510099 MYOM2P54296 1465 aa6.6□□□□□ -1.35
PDLIM5-214ENST00000510099 KIF3BO15066 747 aa6.6□□□□□ -1.35
PDLIM5-214ENST00000510099 POTEGQ6S5H5 508 aa6.6□□□□□ -1.35
PDLIM5-214ENST00000510099 PRKRIP1Q9H875 184 aaPredicted RBP6.6□□□□□ -1.35
PDLIM5-214ENST00000510099 ABCC3O15438 1527 aa6.6□□□□□ -1.35
PDLIM5-214ENST00000510099 ADGRB3O60242 1522 aa6.6□□□□□ -1.35
PDLIM5-214ENST00000510099 ZMYM4Q5VZL5 1548 aa6.6□□□□□ -1.35
PDLIM5-214ENST00000510099 STAC3Q96MF2 364 aa6.59□□□□□ -1.35
PDLIM5-214ENST00000510099 KDM2AQ9Y2K7 1162 aa6.59□□□□□ -1.35
PDLIM5-214ENST00000510099 DIP2BQ9P265 1576 aa6.59□□□□□ -1.35
PDLIM5-214ENST00000510099 NRXN1Q9ULB1 1477 aa6.59□□□□□ -1.36
PDLIM5-214ENST00000510099 RICTORQ6R327 1708 aa6.59□□□□□ -1.36
PDLIM5-214ENST00000510099 NPATQ14207 1427 aa6.59□□□□□ -1.36
PDLIM5-214ENST00000510099 UGGT1Q9NYU2 1555 aa6.58□□□□□ -1.36
PDLIM5-214ENST00000510099 ST20-MTHFSA0A0A6YYL1 179 aa6.58□□□□□ -1.36
PDLIM5-214ENST00000510099 RGL3Q3MIN7 710 aa6.58□□□□□ -1.36
PDLIM5-214ENST00000510099 PELP1Q8IZL8 1130 aaKnown RBP6.58□□□□□ -1.36
PDLIM5-214ENST00000510099 IQGAP1P46940 1657 aa6.58□□□□□ -1.36
PDLIM5-214ENST00000510099 KIAA1210Q9ULL0 1709 aa6.57□□□□□ -1.36
PDLIM5-214ENST00000510099 NBPF1Q3BBV0 1214 aa6.57□□□□□ -1.36
PDLIM5-214ENST00000510099 TESK2Q96S53 571 aa6.57□□□□□ -1.36
PDLIM5-214ENST00000510099 SCAF11Q99590 1463 aaKnown RBP6.57□□□□□ -1.36
PDLIM5-214ENST00000510099 KTN1Q86UP2 1357 aaKnown RBP6.57□□□□□ -1.36
PDLIM5-214ENST00000510099 DISP3Q9P2K9 1392 aa6.57□□□□□ -1.36
PDLIM5-214ENST00000510099 MROH2AA6NES4 1674 aa6.56□□□□□ -1.36
PDLIM5-214ENST00000510099 ZC3H13Q5T200 1668 aaKnown RBP6.56□□□□□ -1.36
PDLIM5-214ENST00000510099 SPDYE4A6NLX3 237 aa6.56□□□□□ -1.36
PDLIM5-214ENST00000510099 MYT1LQ9UL68 1186 aa6.56□□□□□ -1.36
PDLIM5-214ENST00000510099 NOS1P29475 1434 aa6.56□□□□□ -1.36
PDLIM5-214ENST00000510099 ARHGAP31Q2M1Z3 1444 aa6.56□□□□□ -1.36
PDLIM5-214ENST00000510099 IFT172Q9UG01 1749 aa6.56□□□□□ -1.36
PDLIM5-214ENST00000510099 CAMSAP1Q5T5Y3 1602 aa6.55□□□□□ -1.36
PDLIM5-214ENST00000510099 METRNQ9UJH8 293 aa6.55□□□□□ -1.36
PDLIM5-214ENST00000510099 YEATS2Q9ULM3 1422 aa6.55□□□□□ -1.36
PDLIM5-214ENST00000510099 REREQ9P2R6 1566 aa6.55□□□□□ -1.36
PDLIM5-214ENST00000510099 PIK3C2BO00750 1634 aa6.54□□□□□ -1.36
PDLIM5-214ENST00000510099 RAPGEF3O95398 923 aa6.54□□□□□ -1.36
PDLIM5-214ENST00000510099 CCDC184Q52MB2 194 aa6.54□□□□□ -1.36
PDLIM5-214ENST00000510099 MS4A3Q96HJ5 214 aa6.54□□□□□ -1.36
PDLIM5-214ENST00000510099 MRS2Q9HD23 443 aa6.54□□□□□ -1.36
PDLIM5-214ENST00000510099 EIF3AQ14152 1382 aaKnown RBP6.54□□□□□ -1.36
PDLIM5-214ENST00000510099 PARD3Q8TEW0 1356 aa6.54□□□□□ -1.36
PDLIM5-214ENST00000510099 SYNMO15061 1565 aa6.53□□□□□ -1.36
PDLIM5-214ENST00000510099 SETBP1Q9Y6X0 1596 aa6.53□□□□□ -1.36
PDLIM5-214ENST00000510099 PIK3C2GO75747 1445 aa6.53□□□□□ -1.36
PDLIM5-214ENST00000510099 CYB5RLQ6IPT4 315 aa6.53□□□□□ -1.36
PDLIM5-214ENST00000510099 SUPT16HQ9Y5B9 1047 aaKnown RBP6.53□□□□□ -1.36
PDLIM5-214ENST00000510099 AGLP35573 1532 aa6.53□□□□□ -1.36
PDLIM5-214ENST00000510099 MYO3AQ8NEV4 1616 aa6.52□□□□□ -1.37
PDLIM5-214ENST00000510099 HNRNPUQ00839 825 aaKnown RBP eCLIP6.52□□□□□ -1.37
PDLIM5-214ENST00000510099 RALBP1Q15311 655 aa6.52□□□□□ -1.37
PDLIM5-214ENST00000510099 POLR3GLQ9BT43 218 aa6.52□□□□□ -1.37
PDLIM5-214ENST00000510099 SIGLEC1Q9BZZ2 1709 aa6.52□□□□□ -1.37
PDLIM5-214ENST00000510099 BRD4O60885 1362 aaPredicted RBP6.52□□□□□ -1.37
PDLIM5-214ENST00000510099 SBNO2Q9Y2G9 1366 aa6.52□□□□□ -1.37
PDLIM5-214ENST00000510099 KIF1BO60333 1816 aa6.52□□□□□ -1.37
PDLIM5-214ENST00000510099 ADGRB1O14514 1584 aa6.52□□□□□ -1.37
PDLIM5-214ENST00000510099 ZBED9Q6R2W3 1325 aa6.51□□□□□ -1.37
PDLIM5-214ENST00000510099 MYBBP1AQ9BQG0 1328 aaKnown RBP6.51□□□□□ -1.37
PDLIM5-214ENST00000510099 ARHGEF40Q8TER5 1519 aa6.51□□□□□ -1.37
PDLIM5-214ENST00000510099 TMF1P82094 1093 aa6.51□□□□□ -1.37
PDLIM5-214ENST00000510099 PPLO60437 1756 aa6.51□□□□□ -1.37
PDLIM5-214ENST00000510099 RPGRIP1LQ68CZ1 1315 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms