RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 HDGFP51858 240 aaKnown RBP29.76■■■□□ 2.35
HOXC6-204ENST00000509328 CCDC144AA2RUR9 1427 aa29.75■■■□□ 2.35
HOXC6-204ENST00000509328 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.72■■■□□ 2.35
HOXC6-204ENST00000509328 ZNF326Q5BKZ1 582 aaKnown RBP29.7■■■□□ 2.35
HOXC6-204ENST00000509328 PPP1R15AO75807 674 aaPredicted RBP29.68■■■□□ 2.34
HOXC6-204ENST00000509328 ANKRD30BQ9BXX2 1392 aa29.66■■■□□ 2.34
HOXC6-204ENST00000509328 NEXMIFQ5QGS0 1516 aa29.66■■■□□ 2.34
HOXC6-204ENST00000509328 PLEKHG1Q9ULL1 1385 aa29.65■■■□□ 2.34
HOXC6-204ENST00000509328 LTBP4Q8N2S1 1624 aa29.64■■■□□ 2.34
HOXC6-204ENST00000509328 ZNF335Q9H4Z2 1342 aaPredicted RBP29.64■■■□□ 2.34
HOXC6-204ENST00000509328 NUTM2DQ5VT03 806 aaPredicted RBP29.62■■■□□ 2.33
HOXC6-204ENST00000509328 PPLO60437 1756 aa29.62■■■□□ 2.33
HOXC6-204ENST00000509328 SPATA31E1Q6ZUB1 1445 aa29.61■■■□□ 2.33
HOXC6-204ENST00000509328 BCANQ96GW7 911 aa29.6■■■□□ 2.33
HOXC6-204ENST00000509328 RPGRIP1LQ68CZ1 1315 aa29.6■■■□□ 2.33
HOXC6-204ENST00000509328 SLC26A8Q96RN1 970 aa29.56■■■□□ 2.32
HOXC6-204ENST00000509328 IFT172Q9UG01 1749 aa29.56■■■□□ 2.32
HOXC6-204ENST00000509328 STRCP1A6NGW2 1772 aa29.55■■■□□ 2.32
HOXC6-204ENST00000509328 CERKQ8TCT0 537 aa29.54■■■□□ 2.32
HOXC6-204ENST00000509328 SENP3Q9H4L4 574 aaPredicted RBP29.54■■■□□ 2.32
HOXC6-204ENST00000509328 DIP2AQ14689 1571 aa29.54■■■□□ 2.32
HOXC6-204ENST00000509328 CPS1P31327 1500 aa29.54■■■□□ 2.32
HOXC6-204ENST00000509328 SETBP1Q9Y6X0 1596 aa29.53■■■□□ 2.32
HOXC6-204ENST00000509328 VGFO15240 615 aaPredicted RBP29.53■■■□□ 2.32
HOXC6-204ENST00000509328 RGL3Q3MIN7 710 aa29.53■■■□□ 2.32
HOXC6-204ENST00000509328 NRXN3Q9Y4C0 1643 aa29.53■■■□□ 2.32
HOXC6-204ENST00000509328 ADAMTS13Q76LX8 1427 aa29.51■■■□□ 2.31
HOXC6-204ENST00000509328 TBX22Q9Y458 520 aa29.5■■■□□ 2.31
HOXC6-204ENST00000509328 CHD2O14647 1828 aaKnown RBP29.48■■■□□ 2.31
HOXC6-204ENST00000509328 DHX57Q6P158 1386 aaKnown RBP29.48■■■□□ 2.31
HOXC6-204ENST00000509328 PCGF6Q9BYE7 350 aa29.47■■■□□ 2.31
HOXC6-204ENST00000509328 IQSEC2Q5JU85 1478 aa29.46■■■□□ 2.31
HOXC6-204ENST00000509328 NWD1Q149M9 1564 aa29.44■■■□□ 2.3
HOXC6-204ENST00000509328 KCNA6P17658 529 aa29.44■■■□□ 2.3
HOXC6-204ENST00000509328 PIK3R4Q99570 1358 aa29.42■■■□□ 2.3
HOXC6-204ENST00000509328 SETD1AO15047 1707 aaKnown RBP29.4■■■□□ 2.3
HOXC6-204ENST00000509328 LRRC7Q96NW7 1537 aa29.39■■■□□ 2.3
HOXC6-204ENST00000509328 ADGRF5Q8IZF2 1346 aa29.39■■■□□ 2.3
HOXC6-204ENST00000509328 ALKQ9UM73 1620 aa29.38■■■□□ 2.29
HOXC6-204ENST00000509328 MYOM2P54296 1465 aa29.38■■■□□ 2.29
HOXC6-204ENST00000509328 NKTRP30414 1462 aaKnown RBP29.37■■■□□ 2.29
HOXC6-204ENST00000509328 XIRP1Q702N8 1843 aaKnown RBP29.35■■■□□ 2.29
HOXC6-204ENST00000509328 NRXN1Q9ULB1 1477 aa29.34■■■□□ 2.29
HOXC6-204ENST00000509328 METP08581 1390 aa29.33■■■□□ 2.29
HOXC6-204ENST00000509328 PIK3C2GO75747 1445 aa29.33■■■□□ 2.29
HOXC6-204ENST00000509328 XRN1Q8IZH2 1706 aaKnown RBP29.31■■■□□ 2.28
HOXC6-204ENST00000509328 PTPRUQ92729 1446 aa29.31■■■□□ 2.28
HOXC6-204ENST00000509328 STAC3Q96MF2 364 aa29.31■■■□□ 2.28
HOXC6-204ENST00000509328 DCAF11Q8TEB1 546 aa29.3■■■□□ 2.28
HOXC6-204ENST00000509328 PROSER2Q86WR7 435 aaPredicted RBP29.29■■■□□ 2.28
HOXC6-204ENST00000509328 FBXO41Q8TF61 875 aa29.29■■■□□ 2.28
HOXC6-204ENST00000509328 AMOTL2Q9Y2J4 779 aa29.29■■■□□ 2.28
HOXC6-204ENST00000509328 LAMC1P11047 1609 aa29.29■■■□□ 2.28
HOXC6-204ENST00000509328 SIN3AQ96ST3 1273 aa29.28■■■□□ 2.28
HOXC6-204ENST00000509328 KDM2AQ9Y2K7 1162 aa29.26■■■□□ 2.27
HOXC6-204ENST00000509328 TMEM94Q12767 1356 aa29.26■■■□□ 2.27
HOXC6-204ENST00000509328 NEUROD1Q13562 356 aa29.22■■■□□ 2.27
HOXC6-204ENST00000509328 C14orf93Q9H972 538 aaKnown RBP29.22■■■□□ 2.27
HOXC6-204ENST00000509328 NCOA3Q9Y6Q9 1424 aa29.2■■■□□ 2.26
HOXC6-204ENST00000509328 UBAP1LF5GYI3 381 aa29.19■■■□□ 2.26
HOXC6-204ENST00000509328 RBM33Q96EV2 1170 aaKnown RBP29.19■■■□□ 2.26
HOXC6-204ENST00000509328 ASXL1Q8IXJ9 1541 aa29.19■■■□□ 2.26
HOXC6-204ENST00000509328 PRAG1Q86YV5 1406 aa29.18■■■□□ 2.26
HOXC6-204ENST00000509328 CFAP70Q5T0N1 1121 aa29.17■■■□□ 2.26
HOXC6-204ENST00000509328 TOM1O60784 492 aa29.16■■■□□ 2.26
HOXC6-204ENST00000509328 ILDR1Q86SU0 546 aaPredicted RBP29.16■■■□□ 2.26
HOXC6-204ENST00000509328 KNDC1Q76NI1 1749 aa29.15■■■□□ 2.26
HOXC6-204ENST00000509328 PTCH1Q13635 1447 aa29.15■■■□□ 2.26
HOXC6-204ENST00000509328 TMEM132EQ6IEE7 984 aa29.14■■■□□ 2.26
HOXC6-204ENST00000509328 L3MBTL2Q969R5 705 aa29.14■■■□□ 2.26
HOXC6-204ENST00000509328 LRPPRCP42704 1394 aaKnown RBP29.13■■■□□ 2.25
HOXC6-204ENST00000509328 MSH6P52701 1360 aa29.13■■■□□ 2.25
HOXC6-204ENST00000509328 KIAA1210Q9ULL0 1709 aa29.12■■■□□ 2.25
HOXC6-204ENST00000509328 YTHDC2Q9H6S0 1430 aaKnown RBP29.11■■■□□ 2.25
HOXC6-204ENST00000509328 TECPR2O15040 1411 aa29.11■■■□□ 2.25
HOXC6-204ENST00000509328 C14orf37Q86TY3 774 aa29.1■■■□□ 2.25
HOXC6-204ENST00000509328 ABCC11Q96J66 1382 aa29.1■■■□□ 2.25
HOXC6-204ENST00000509328 ROBO2Q9HCK4 1378 aa29.1■■■□□ 2.25
HOXC6-204ENST00000509328 ADGRB1O14514 1584 aa29.09■■■□□ 2.25
HOXC6-204ENST00000509328 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.09■■■□□ 2.25
HOXC6-204ENST00000509328 STK26Q9P289 416 aa29.08■■■□□ 2.25
HOXC6-204ENST00000509328 CLSPNQ9HAW4 1339 aa29.06■■■□□ 2.24
HOXC6-204ENST00000509328 C19orf44Q9H6X5 657 aa29.06■■■□□ 2.24
HOXC6-204ENST00000509328 NALCNQ8IZF0 1738 aa29.06■■■□□ 2.24
HOXC6-204ENST00000509328 TONSLQ96HA7 1378 aa29.05■■■□□ 2.24
HOXC6-204ENST00000509328 ADGRL3Q9HAR2 1447 aa29.03■■■□□ 2.24
HOXC6-204ENST00000509328 PIP4K2BP78356 416 aa29.02■■■□□ 2.24
HOXC6-204ENST00000509328 SIRT1Q96EB6 747 aa29.01■■■□□ 2.23
HOXC6-204ENST00000509328 DCCP43146 1447 aa29.01■■■□□ 2.23
HOXC6-204ENST00000509328 DLC1Q96QB1 1528 aa29■■■□□ 2.23
HOXC6-204ENST00000509328 SCAF1Q9H7N4 1312 aaKnown RBP29■■■□□ 2.23
HOXC6-204ENST00000509328 FAM135BQ49AJ0 1406 aa29■■■□□ 2.23
HOXC6-204ENST00000509328 ATF3P18847 181 aa28.99■■■□□ 2.23
HOXC6-204ENST00000509328 CADPS2Q86UW7 1296 aa28.99■■■□□ 2.23
HOXC6-204ENST00000509328 TRPM1Q7Z4N2 1603 aa28.98■■■□□ 2.23
HOXC6-204ENST00000509328 CCER1Q8TC90 406 aaPredicted RBP28.97■■■□□ 2.23
HOXC6-204ENST00000509328 WAPLQ7Z5K2 1190 aa28.96■■■□□ 2.23
HOXC6-204ENST00000509328 SLAIN2Q9P270 581 aa28.95■■■□□ 2.22
HOXC6-204ENST00000509328 PLEKHH1Q9ULM0 1364 aa28.94■■■□□ 2.22
HOXC6-204ENST00000509328 NBPF1Q3BBV0 1214 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms