RNA–Protein interactions for RNA: ENST00000508343.1

TRIO-211, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 2

Gene TRIO, Length 776 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-211ENST00000508343 MYO5BQ9ULV0 1848 aa22.41■■□□□ 1.18
TRIO-211ENST00000508343 PPP1R15AO75807 674 aaPredicted RBP22.41■■□□□ 1.18
TRIO-211ENST00000508343 BCANQ96GW7 911 aa22.4■■□□□ 1.18
TRIO-211ENST00000508343 TRPM2O94759 1503 aa22.4■■□□□ 1.18
TRIO-211ENST00000508343 CPS1P31327 1500 aa22.4■■□□□ 1.18
TRIO-211ENST00000508343 RAB3GAP2Q9H2M9 1393 aa22.38■■□□□ 1.17
TRIO-211ENST00000508343 FOXD1Q16676 465 aa22.38■■□□□ 1.17
TRIO-211ENST00000508343 SLC26A8Q96RN1 970 aa22.38■■□□□ 1.17
TRIO-211ENST00000508343 PLEKHG1Q9ULL1 1385 aa22.37■■□□□ 1.17
TRIO-211ENST00000508343 ZNF326Q5BKZ1 582 aaKnown RBP22.36■■□□□ 1.17
TRIO-211ENST00000508343 NUTM2DQ5VT03 806 aaPredicted RBP22.36■■□□□ 1.17
TRIO-211ENST00000508343 CLTCL1P53675 1640 aa22.35■■□□□ 1.17
TRIO-211ENST00000508343 HRCP23327 699 aa22.34■■□□□ 1.17
TRIO-211ENST00000508343 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
TRIO-211ENST00000508343 KCNA6P17658 529 aa22.31■■□□□ 1.16
TRIO-211ENST00000508343 TBX22Q9Y458 520 aa22.31■■□□□ 1.16
TRIO-211ENST00000508343 UBAP1LF5GYI3 381 aa22.3■■□□□ 1.16
TRIO-211ENST00000508343 STRCP1A6NGW2 1772 aa22.3■■□□□ 1.16
TRIO-211ENST00000508343 LRRC7Q96NW7 1537 aa22.28■■□□□ 1.16
TRIO-211ENST00000508343 KIF1BO60333 1816 aa22.28■■□□□ 1.16
TRIO-211ENST00000508343 CCDC144AA2RUR9 1427 aa22.26■■□□□ 1.15
TRIO-211ENST00000508343 RPGRIP1LQ68CZ1 1315 aa22.26■■□□□ 1.15
TRIO-211ENST00000508343 ADAMTS13Q76LX8 1427 aa22.25■■□□□ 1.15
TRIO-211ENST00000508343 TOM1O60784 492 aa22.24■■□□□ 1.15
TRIO-211ENST00000508343 NEXMIFQ5QGS0 1516 aa22.22■■□□□ 1.15
TRIO-211ENST00000508343 VGFO15240 615 aaPredicted RBP22.22■■□□□ 1.15
TRIO-211ENST00000508343 PROSER2Q86WR7 435 aaPredicted RBP22.22■■□□□ 1.15
TRIO-211ENST00000508343 PIK3R4Q99570 1358 aa22.2■■□□□ 1.14
TRIO-211ENST00000508343 DIP2AQ14689 1571 aa22.2■■□□□ 1.14
TRIO-211ENST00000508343 TMEM94Q12767 1356 aa22.18■■□□□ 1.14
TRIO-211ENST00000508343 RGL3Q3MIN7 710 aa22.18■■□□□ 1.14
TRIO-211ENST00000508343 NWD1Q149M9 1564 aa22.17■■□□□ 1.14
TRIO-211ENST00000508343 SETBP1Q9Y6X0 1596 aa22.17■■□□□ 1.14
TRIO-211ENST00000508343 NKTRP30414 1462 aaKnown RBP22.17■■□□□ 1.14
TRIO-211ENST00000508343 CHD2O14647 1828 aaKnown RBP22.17■■□□□ 1.14
TRIO-211ENST00000508343 SPATA31E1Q6ZUB1 1445 aa22.16■■□□□ 1.14
TRIO-211ENST00000508343 PIP4K2BP78356 416 aa22.15■■□□□ 1.14
TRIO-211ENST00000508343 RBM33Q96EV2 1170 aaKnown RBP22.15■■□□□ 1.14
TRIO-211ENST00000508343 AMOTL2Q9Y2J4 779 aa22.15■■□□□ 1.14
TRIO-211ENST00000508343 ANKRD30BQ9BXX2 1392 aa22.14■■□□□ 1.14
TRIO-211ENST00000508343 NRXN3Q9Y4C0 1643 aa22.14■■□□□ 1.14
TRIO-211ENST00000508343 SCAF1Q9H7N4 1312 aaKnown RBP22.13■■□□□ 1.13
TRIO-211ENST00000508343 XIRP1Q702N8 1843 aaKnown RBP22.12■■□□□ 1.13
TRIO-211ENST00000508343 METP08581 1390 aa22.12■■□□□ 1.13
TRIO-211ENST00000508343 PTPRUQ92729 1446 aa22.11■■□□□ 1.13
TRIO-211ENST00000508343 PPLO60437 1756 aa22.1■■□□□ 1.13
TRIO-211ENST00000508343 ALKQ9UM73 1620 aa22.09■■□□□ 1.13
TRIO-211ENST00000508343 ADGRF5Q8IZF2 1346 aa22.08■■□□□ 1.13
TRIO-211ENST00000508343 NCOA3Q9Y6Q9 1424 aa22.08■■□□□ 1.13
TRIO-211ENST00000508343 MSH6P52701 1360 aa22.06■■□□□ 1.12
TRIO-211ENST00000508343 C14orf37Q86TY3 774 aa22.05■■□□□ 1.12
TRIO-211ENST00000508343 TRIM26Q12899 539 aaPredicted RBP22.04■■□□□ 1.12
TRIO-211ENST00000508343 C19orf44Q9H6X5 657 aa22.03■■□□□ 1.12
TRIO-211ENST00000508343 HSPA1LP34931 641 aa22.02■■□□□ 1.12
TRIO-211ENST00000508343 XRN1Q8IZH2 1706 aaKnown RBP22.01■■□□□ 1.11
TRIO-211ENST00000508343 IFT172Q9UG01 1749 aa22.01■■□□□ 1.11
TRIO-211ENST00000508343 SLAIN2Q9P270 581 aa21.99■■□□□ 1.11
TRIO-211ENST00000508343 SETD1AO15047 1707 aaKnown RBP21.99■■□□□ 1.11
TRIO-211ENST00000508343 PIK3C2GO75747 1445 aa21.97■■□□□ 1.11
TRIO-211ENST00000508343 FAM135BQ49AJ0 1406 aa21.97■■□□□ 1.11
TRIO-211ENST00000508343 ATF3P18847 181 aa21.97■■□□□ 1.11
TRIO-211ENST00000508343 CADPS2Q86UW7 1296 aa21.97■■□□□ 1.11
TRIO-211ENST00000508343 MYOM2P54296 1465 aa21.96■■□□□ 1.11
TRIO-211ENST00000508343 DCAF11Q8TEB1 546 aa21.95■■□□□ 1.1
TRIO-211ENST00000508343 STAC3Q96MF2 364 aa21.95■■□□□ 1.1
TRIO-211ENST00000508343 C14orf93Q9H972 538 aaKnown RBP21.95■■□□□ 1.1
TRIO-211ENST00000508343 NRXN1Q9ULB1 1477 aa21.95■■□□□ 1.1
TRIO-211ENST00000508343 PTCH1Q13635 1447 aa21.94■■□□□ 1.1
TRIO-211ENST00000508343 TMEM132EQ6IEE7 984 aa21.93■■□□□ 1.1
TRIO-211ENST00000508343 PRAG1Q86YV5 1406 aa21.93■■□□□ 1.1
TRIO-211ENST00000508343 ROBO2Q9HCK4 1378 aa21.93■■□□□ 1.1
TRIO-211ENST00000508343 KDM2AQ9Y2K7 1162 aa21.93■■□□□ 1.1
TRIO-211ENST00000508343 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.92■■□□□ 1.1
TRIO-211ENST00000508343 CFAP70Q5T0N1 1121 aa21.92■■□□□ 1.1
TRIO-211ENST00000508343 STK26Q9P289 416 aa21.91■■□□□ 1.1
TRIO-211ENST00000508343 DCCP43146 1447 aa21.9■■□□□ 1.1
TRIO-211ENST00000508343 LRPPRCP42704 1394 aaKnown RBP21.9■■□□□ 1.1
TRIO-211ENST00000508343 DHX57Q6P158 1386 aaKnown RBP21.9■■□□□ 1.1
TRIO-211ENST00000508343 ABCC11Q96J66 1382 aa21.89■■□□□ 1.1
TRIO-211ENST00000508343 ADGRL3Q9HAR2 1447 aa21.89■■□□□ 1.09
TRIO-211ENST00000508343 ROBO1Q9Y6N7 1651 aa21.87■■□□□ 1.09
TRIO-211ENST00000508343 TECPR2O15040 1411 aa21.87■■□□□ 1.09
TRIO-211ENST00000508343 ASXL1Q8IXJ9 1541 aa21.86■■□□□ 1.09
TRIO-211ENST00000508343 YTHDC2Q9H6S0 1430 aaKnown RBP21.86■■□□□ 1.09
TRIO-211ENST00000508343 SIRT1Q96EB6 747 aa21.85■■□□□ 1.09
TRIO-211ENST00000508343 WAPLQ7Z5K2 1190 aa21.84■■□□□ 1.09
TRIO-211ENST00000508343 LAMC1P11047 1609 aa21.83■■□□□ 1.08
TRIO-211ENST00000508343 SIN3AQ96ST3 1273 aa21.82■■□□□ 1.08
TRIO-211ENST00000508343 MST1RQ04912 1400 aa21.81■■□□□ 1.08
TRIO-211ENST00000508343 NALCNQ8IZF0 1738 aa21.81■■□□□ 1.08
TRIO-211ENST00000508343 BRINP3Q76B58 766 aa21.8■■□□□ 1.08
TRIO-211ENST00000508343 NEUROD1Q13562 356 aa21.79■■□□□ 1.08
TRIO-211ENST00000508343 KNDC1Q76NI1 1749 aa21.78■■□□□ 1.08
TRIO-211ENST00000508343 PLEKHH1Q9ULM0 1364 aa21.78■■□□□ 1.08
TRIO-211ENST00000508343 DISP3Q9P2K9 1392 aa21.77■■□□□ 1.08
TRIO-211ENST00000508343 ADGRB1O14514 1584 aa21.76■■□□□ 1.07
TRIO-211ENST00000508343 L3MBTL2Q969R5 705 aa21.76■■□□□ 1.07
TRIO-211ENST00000508343 PRAM1Q96QH2 718 aa21.75■■□□□ 1.07
TRIO-211ENST00000508343 TRAK1Q9UPV9 953 aa21.75■■□□□ 1.07
TRIO-211ENST00000508343 C1orf167Q5SNV9 1468 aa21.75■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms