RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 IQGAP1P46940 1657 aa10.1□□□□□ -0.79
HMGN1P16-201ENST00000508308 CHIC2Q9UKJ5 165 aa10.1□□□□□ -0.79
HMGN1P16-201ENST00000508308 LTKP29376 864 aa10.09□□□□□ -0.79
HMGN1P16-201ENST00000508308 ARHGAP23Q9P227 1491 aa10.09□□□□□ -0.79
HMGN1P16-201ENST00000508308 SLIT1O75093 1534 aa10.07□□□□□ -0.8
HMGN1P16-201ENST00000508308 LMTK2Q8IWU2 1503 aa10.07□□□□□ -0.8
HMGN1P16-201ENST00000508308 ADGRL2O95490 1459 aa10.07□□□□□ -0.8
HMGN1P16-201ENST00000508308 PIK3C2BO00750 1634 aa10.07□□□□□ -0.8
HMGN1P16-201ENST00000508308 LRRC7Q96NW7 1537 aa10.07□□□□□ -0.8
HMGN1P16-201ENST00000508308 SYNMO15061 1565 aa10.06□□□□□ -0.8
HMGN1P16-201ENST00000508308 ANKRD30AQ9BXX3 1397 aa10.06□□□□□ -0.8
HMGN1P16-201ENST00000508308 HSPA1LP34931 641 aa10.06□□□□□ -0.8
HMGN1P16-201ENST00000508308 SCAF11Q99590 1463 aaKnown RBP10.05□□□□□ -0.8
HMGN1P16-201ENST00000508308 POTEMA6NI47 508 aa10.05□□□□□ -0.8
HMGN1P16-201ENST00000508308 PIP4K2BP78356 416 aa10.05□□□□□ -0.8
HMGN1P16-201ENST00000508308 EFCAB6Q5THR3 1501 aa10.04□□□□□ -0.8
HMGN1P16-201ENST00000508308 IDI1Q13907 227 aa10.04□□□□□ -0.8
HMGN1P16-201ENST00000508308 TXNDC2Q86VQ3 553 aa10.04□□□□□ -0.8
HMGN1P16-201ENST00000508308 XIRP1Q702N8 1843 aaKnown RBP10.04□□□□□ -0.8
HMGN1P16-201ENST00000508308 NOS1P29475 1434 aa10.04□□□□□ -0.8
HMGN1P16-201ENST00000508308 KANK1Q14678 1352 aa10.03□□□□□ -0.8
HMGN1P16-201ENST00000508308 TMEM2Q9UHN6 1383 aa10.03□□□□□ -0.8
HMGN1P16-201ENST00000508308 KDM5AP29375 1690 aaKnown RBP10.03□□□□□ -0.8
HMGN1P16-201ENST00000508308 SOCS7O14512 581 aa10.03□□□□□ -0.8
HMGN1P16-201ENST00000508308 TOM1O60784 492 aa10.03□□□□□ -0.8
HMGN1P16-201ENST00000508308 POTEIP0CG38 1075 aa10.03□□□□□ -0.8
HMGN1P16-201ENST00000508308 FAM50AQ14320 339 aaKnown RBP10.02□□□□□ -0.81
HMGN1P16-201ENST00000508308 TET3O43151 1660 aa10.02□□□□□ -0.81
HMGN1P16-201ENST00000508308 ANKRD50Q9ULJ7 1429 aa10.01□□□□□ -0.81
HMGN1P16-201ENST00000508308 PRKAR2AP13861 404 aaKnown RBP10□□□□□ -0.81
HMGN1P16-201ENST00000508308 ADGRB3O60242 1522 aa9.99□□□□□ -0.81
HMGN1P16-201ENST00000508308 ZBTB12Q9Y330 459 aaPredicted RBP9.99□□□□□ -0.81
HMGN1P16-201ENST00000508308 EID1Q9Y6B2 187 aa9.99□□□□□ -0.81
HMGN1P16-201ENST00000508308 MED1Q15648 1581 aaPredicted RBP9.99□□□□□ -0.81
HMGN1P16-201ENST00000508308 MYO5BQ9ULV0 1848 aa9.98□□□□□ -0.81
HMGN1P16-201ENST00000508308 UNC13BO14795 1591 aa9.98□□□□□ -0.81
HMGN1P16-201ENST00000508308 SLC26A8Q96RN1 970 aa9.98□□□□□ -0.81
HMGN1P16-201ENST00000508308 PCDH10Q9P2E7 1040 aa9.98□□□□□ -0.81
HMGN1P16-201ENST00000508308 RPRD2Q5VT52 1461 aaKnown RBP9.98□□□□□ -0.81
HMGN1P16-201ENST00000508308 POTEGQ6S5H5 508 aa9.97□□□□□ -0.81
HMGN1P16-201ENST00000508308 SLC52A1Q9NWF4 448 aa9.97□□□□□ -0.81
HMGN1P16-201ENST00000508308 ZFYVE9O95405 1425 aa9.97□□□□□ -0.81
HMGN1P16-201ENST00000508308 TMEM131LA2VDJ0 1609 aa9.96□□□□□ -0.81
HMGN1P16-201ENST00000508308 STAG3Q9UJ98 1225 aa9.96□□□□□ -0.82
HMGN1P16-201ENST00000508308 ROCK1Q13464 1354 aa9.96□□□□□ -0.82
HMGN1P16-201ENST00000508308 E9PCH4 1651 aa9.96□□□□□ -0.82
HMGN1P16-201ENST00000508308 GCC2Q8IWJ2 1684 aa9.96□□□□□ -0.82
HMGN1P16-201ENST00000508308 KCNA6P17658 529 aa9.95□□□□□ -0.82
HMGN1P16-201ENST00000508308 PPARGC1BQ86YN6 1023 aaKnown RBP9.95□□□□□ -0.82
HMGN1P16-201ENST00000508308 RBM33Q96EV2 1170 aaKnown RBP9.95□□□□□ -0.82
HMGN1P16-201ENST00000508308 TMEM94Q12767 1356 aa9.95□□□□□ -0.82
HMGN1P16-201ENST00000508308 IQGAP3Q86VI3 1631 aa9.94□□□□□ -0.82
HMGN1P16-201ENST00000508308 NWD1Q149M9 1564 aa9.94□□□□□ -0.82
HMGN1P16-201ENST00000508308 FAM135BQ49AJ0 1406 aa9.92□□□□□ -0.82
HMGN1P16-201ENST00000508308 RIMS2Q9UQ26 1411 aa9.92□□□□□ -0.82
HMGN1P16-201ENST00000508308 PLEKHG1Q9ULL1 1385 aa9.92□□□□□ -0.82
HMGN1P16-201ENST00000508308 CHD2O14647 1828 aaKnown RBP9.92□□□□□ -0.82
HMGN1P16-201ENST00000508308 NKTRP30414 1462 aaKnown RBP9.91□□□□□ -0.82
HMGN1P16-201ENST00000508308 PROSER2Q86WR7 435 aaPredicted RBP9.91□□□□□ -0.82
HMGN1P16-201ENST00000508308 ADAMTS13Q76LX8 1427 aa9.9□□□□□ -0.82
HMGN1P16-201ENST00000508308 NUP155O75694 1391 aa9.9□□□□□ -0.82
HMGN1P16-201ENST00000508308 ITGAEP38570 1179 aa9.9□□□□□ -0.82
HMGN1P16-201ENST00000508308 RGS17Q9UGC6 210 aaPredicted RBP9.9□□□□□ -0.82
HMGN1P16-201ENST00000508308 ROBO1Q9Y6N7 1651 aa9.9□□□□□ -0.83
HMGN1P16-201ENST00000508308 NUTM2DQ5VT03 806 aaPredicted RBP9.89□□□□□ -0.83
HMGN1P16-201ENST00000508308 TBX22Q9Y458 520 aa9.89□□□□□ -0.83
HMGN1P16-201ENST00000508308 BCANQ96GW7 911 aa9.88□□□□□ -0.83
HMGN1P16-201ENST00000508308 CHGAP10645 457 aaKnown RBP9.87□□□□□ -0.83
HMGN1P16-201ENST00000508308 NRXN3Q9Y4C0 1643 aa9.86□□□□□ -0.83
HMGN1P16-201ENST00000508308 PPP1R15AO75807 674 aaPredicted RBP9.86□□□□□ -0.83
HMGN1P16-201ENST00000508308 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.86□□□□□ -0.83
HMGN1P16-201ENST00000508308 PTPRUQ92729 1446 aa9.86□□□□□ -0.83
HMGN1P16-201ENST00000508308 OTUD5Q96G74 571 aa9.86□□□□□ -0.83
HMGN1P16-201ENST00000508308 SLAIN2Q9P270 581 aa9.86□□□□□ -0.83
HMGN1P16-201ENST00000508308 RRBP1Q9P2E9 1410 aaKnown RBP9.86□□□□□ -0.83
HMGN1P16-201ENST00000508308 SPHKAPQ2M3C7 1700 aa9.85□□□□□ -0.83
HMGN1P16-201ENST00000508308 HDGFP51858 240 aaKnown RBP9.85□□□□□ -0.83
HMGN1P16-201ENST00000508308 MSH6P52701 1360 aa9.85□□□□□ -0.83
HMGN1P16-201ENST00000508308 DIP2AQ14689 1571 aa9.84□□□□□ -0.83
HMGN1P16-201ENST00000508308 NAIPQ13075 1403 aa9.84□□□□□ -0.83
HMGN1P16-201ENST00000508308 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.84□□□□□ -0.83
HMGN1P16-201ENST00000508308 NCOA3Q9Y6Q9 1424 aa9.83□□□□□ -0.84
HMGN1P16-201ENST00000508308 PIK3R4Q99570 1358 aa9.83□□□□□ -0.84
HMGN1P16-201ENST00000508308 CLTCL1P53675 1640 aa9.82□□□□□ -0.84
HMGN1P16-201ENST00000508308 POTEAQ6S8J7 498 aa9.82□□□□□ -0.84
HMGN1P16-201ENST00000508308 AMOTL2Q9Y2J4 779 aa9.82□□□□□ -0.84
HMGN1P16-201ENST00000508308 SETBP1Q9Y6X0 1596 aa9.82□□□□□ -0.84
HMGN1P16-201ENST00000508308 PHLPP1O60346 1717 aa9.82□□□□□ -0.84
HMGN1P16-201ENST00000508308 XRN1Q8IZH2 1706 aaKnown RBP9.82□□□□□ -0.84
HMGN1P16-201ENST00000508308 COL16A1Q07092 1604 aaPredicted RBP9.82□□□□□ -0.84
HMGN1P16-201ENST00000508308 TRPM2O94759 1503 aa9.82□□□□□ -0.84
HMGN1P16-201ENST00000508308 METP08581 1390 aa9.81□□□□□ -0.84
HMGN1P16-201ENST00000508308 NEXMIFQ5QGS0 1516 aa9.81□□□□□ -0.84
HMGN1P16-201ENST00000508308 C19orf44Q9H6X5 657 aa9.8□□□□□ -0.84
HMGN1P16-201ENST00000508308 HFM1A2PYH4 1435 aa9.79□□□□□ -0.84
HMGN1P16-201ENST00000508308 JCADQ9P266 1359 aa9.78□□□□□ -0.84
HMGN1P16-201ENST00000508308 CADPS2Q86UW7 1296 aa9.78□□□□□ -0.84
HMGN1P16-201ENST00000508308 LRP6O75581 1613 aa9.78□□□□□ -0.84
HMGN1P16-201ENST00000508308 AHDC1Q5TGY3 1603 aaPredicted RBP9.78□□□□□ -0.84
HMGN1P16-201ENST00000508308 SETD1AO15047 1707 aaKnown RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms