RNA–Protein interactions for RNA: ENST00000506351.6

TNPO1-204, Transcript of transportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNPO1, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-204ENST00000506351 DISP3Q9P2K9 1392 aa10.04□□□□□ -0.8
TNPO1-204ENST00000506351 REREQ9P2R6 1566 aa10.04□□□□□ -0.8
TNPO1-204ENST00000506351 SETBP1Q9Y6X0 1596 aa10.03□□□□□ -0.8
TNPO1-204ENST00000506351 TESK2Q96S53 571 aa10.03□□□□□ -0.8
TNPO1-204ENST00000506351 MRS2Q9HD23 443 aa10.03□□□□□ -0.8
TNPO1-204ENST00000506351 NOS1P29475 1434 aa10.02□□□□□ -0.8
TNPO1-204ENST00000506351 HNRNPUQ00839 825 aaKnown RBP eCLIP10.01□□□□□ -0.81
TNPO1-204ENST00000506351 ARHGAP31Q2M1Z3 1444 aa10.01□□□□□ -0.81
TNPO1-204ENST00000506351 GGT6Q6P531 493 aa10.01□□□□□ -0.81
TNPO1-204ENST00000506351 QRICH2Q9H0J4 1663 aa10.01□□□□□ -0.81
TNPO1-204ENST00000506351 KTN1Q86UP2 1357 aaKnown RBP10.01□□□□□ -0.81
TNPO1-204ENST00000506351 SUPT16HQ9Y5B9 1047 aaKnown RBP10.01□□□□□ -0.81
TNPO1-204ENST00000506351 NEXMIFQ5QGS0 1516 aa10□□□□□ -0.81
TNPO1-204ENST00000506351 FAM69CQ0P6D2 419 aa10□□□□□ -0.81
TNPO1-204ENST00000506351 CLTCQ00610 1675 aaKnown RBP10□□□□□ -0.81
TNPO1-204ENST00000506351 ARHGEF40Q8TER5 1519 aa9.99□□□□□ -0.81
TNPO1-204ENST00000506351 EIF3AQ14152 1382 aaKnown RBP9.99□□□□□ -0.81
TNPO1-204ENST00000506351 WASHC2CQ9Y4E1 1318 aa9.99□□□□□ -0.81
TNPO1-204ENST00000506351 TMF1P82094 1093 aa9.99□□□□□ -0.81
TNPO1-204ENST00000506351 AGLP35573 1532 aa9.99□□□□□ -0.81
TNPO1-204ENST00000506351 PIK3C2GO75747 1445 aa9.99□□□□□ -0.81
TNPO1-204ENST00000506351 ARHGEF28Q8N1W1 1705 aaKnown RBP9.98□□□□□ -0.81
TNPO1-204ENST00000506351 ADGRF5Q8IZF2 1346 aa9.98□□□□□ -0.81
TNPO1-204ENST00000506351 TMEM131LA2VDJ0 1609 aa9.98□□□□□ -0.81
TNPO1-204ENST00000506351 PARD3Q8TEW0 1356 aa9.98□□□□□ -0.81
TNPO1-204ENST00000506351 FAM9BQ8IZU0 186 aa9.98□□□□□ -0.81
TNPO1-204ENST00000506351 ADGRB1O14514 1584 aa9.97□□□□□ -0.81
TNPO1-204ENST00000506351 MYBBP1AQ9BQG0 1328 aaKnown RBP9.97□□□□□ -0.81
TNPO1-204ENST00000506351 CNGB1Q14028 1251 aaPredicted RBP9.96□□□□□ -0.81
TNPO1-204ENST00000506351 BRD4O60885 1362 aaPredicted RBP9.96□□□□□ -0.81
TNPO1-204ENST00000506351 RALBP1Q15311 655 aa9.96□□□□□ -0.82
TNPO1-204ENST00000506351 ZBED9Q6R2W3 1325 aa9.96□□□□□ -0.82
TNPO1-204ENST00000506351 ERVK-7P63135 1459 aa9.95□□□□□ -0.82
TNPO1-204ENST00000506351 PER1O15534 1290 aaPredicted RBP9.95□□□□□ -0.82
TNPO1-204ENST00000506351 CFAP70Q5T0N1 1121 aa9.95□□□□□ -0.82
TNPO1-204ENST00000506351 RPGRIP1LQ68CZ1 1315 aa9.94□□□□□ -0.82
TNPO1-204ENST00000506351 CHGAP10645 457 aaKnown RBP9.93□□□□□ -0.82
TNPO1-204ENST00000506351 LRPPRCP42704 1394 aaKnown RBP9.93□□□□□ -0.82
TNPO1-204ENST00000506351 PANK3Q9H999 370 aa9.93□□□□□ -0.82
TNPO1-204ENST00000506351 SBNO2Q9Y2G9 1366 aa9.92□□□□□ -0.82
TNPO1-204ENST00000506351 SPATA31D1Q6ZQQ2 1576 aa9.92□□□□□ -0.82
TNPO1-204ENST00000506351 ASXL1Q8IXJ9 1541 aa9.92□□□□□ -0.82
TNPO1-204ENST00000506351 CDCA8Q53HL2 280 aa9.92□□□□□ -0.82
TNPO1-204ENST00000506351 FKBP8Q14318 412 aa9.91□□□□□ -0.82
TNPO1-204ENST00000506351 PNISRQ8TF01 805 aaKnown RBP9.91□□□□□ -0.82
TNPO1-204ENST00000506351 NEFLP07196 543 aa9.91□□□□□ -0.82
TNPO1-204ENST00000506351 TMC1Q8TDI8 760 aa9.91□□□□□ -0.82
TNPO1-204ENST00000506351 ZFYVE9O95405 1425 aa9.9□□□□□ -0.82
TNPO1-204ENST00000506351 NLRP13Q86W25 1043 aa9.9□□□□□ -0.82
TNPO1-204ENST00000506351 SETD1AO15047 1707 aaKnown RBP9.9□□□□□ -0.83
TNPO1-204ENST00000506351 C14orf93Q9H972 538 aaKnown RBP9.9□□□□□ -0.83
TNPO1-204ENST00000506351 USP32Q8NFA0 1604 aa9.89□□□□□ -0.83
TNPO1-204ENST00000506351 SLC24A1O60721 1099 aa9.88□□□□□ -0.83
TNPO1-204ENST00000506351 CC2D1BQ5T0F9 858 aaKnown RBP9.88□□□□□ -0.83
TNPO1-204ENST00000506351 SLC52A1Q9NWF4 448 aa9.88□□□□□ -0.83
TNPO1-204ENST00000506351 SMG6Q86US8 1419 aaKnown RBP9.88□□□□□ -0.83
TNPO1-204ENST00000506351 CENPJQ9HC77 1338 aaPredicted RBP9.88□□□□□ -0.83
TNPO1-204ENST00000506351 IDI1Q13907 227 aa9.88□□□□□ -0.83
TNPO1-204ENST00000506351 TULP4Q9NRJ4 1543 aa9.87□□□□□ -0.83
TNPO1-204ENST00000506351 NPC1L1Q9UHC9 1359 aa9.87□□□□□ -0.83
TNPO1-204ENST00000506351 BLMP54132 1417 aaPredicted RBP9.87□□□□□ -0.83
TNPO1-204ENST00000506351 PPP6R1Q9UPN7 881 aa9.86□□□□□ -0.83
TNPO1-204ENST00000506351 INSRP06213 1382 aa9.86□□□□□ -0.83
TNPO1-204ENST00000506351 VGFO15240 615 aaPredicted RBP9.86□□□□□ -0.83
TNPO1-204ENST00000506351 ALKQ9UM73 1620 aa9.86□□□□□ -0.83
TNPO1-204ENST00000506351 AMER1Q5JTC6 1135 aaPredicted RBP9.85□□□□□ -0.83
TNPO1-204ENST00000506351 BCANQ96GW7 911 aa9.85□□□□□ -0.83
TNPO1-204ENST00000506351 KNSTRNQ9Y448 316 aa9.85□□□□□ -0.83
TNPO1-204ENST00000506351 TRAK1Q9UPV9 953 aa9.85□□□□□ -0.83
TNPO1-204ENST00000506351 NRXN3Q9Y4C0 1643 aa9.84□□□□□ -0.83
TNPO1-204ENST00000506351 NUTM2DQ5VT03 806 aaPredicted RBP9.84□□□□□ -0.83
TNPO1-204ENST00000506351 FBXO31Q5XUX0 539 aaPredicted RBP9.84□□□□□ -0.83
TNPO1-204ENST00000506351 TMEM132EQ6IEE7 984 aa9.84□□□□□ -0.83
TNPO1-204ENST00000506351 A2ML1A8K2U0 1454 aa9.84□□□□□ -0.83
TNPO1-204ENST00000506351 PTPRMP28827 1452 aa9.84□□□□□ -0.83
TNPO1-204ENST00000506351 ANKRD26Q9UPS8 1709 aa9.84□□□□□ -0.83
TNPO1-204ENST00000506351 UBR1Q8IWV7 1749 aa9.83□□□□□ -0.84
TNPO1-204ENST00000506351 KNDC1Q76NI1 1749 aa9.83□□□□□ -0.84
TNPO1-204ENST00000506351 SHPRHQ149N8 1683 aa9.82□□□□□ -0.84
TNPO1-204ENST00000506351 PELP1Q8IZL8 1130 aaKnown RBP9.82□□□□□ -0.84
TNPO1-204ENST00000506351 NUDCQ9Y266 331 aa9.82□□□□□ -0.84
TNPO1-204ENST00000506351 PPP2R1AP30153 589 aa9.81□□□□□ -0.84
TNPO1-204ENST00000506351 FER1L4A9Z1Z3 1794 aa9.81□□□□□ -0.84
TNPO1-204ENST00000506351 KIF20BQ96Q89 1820 aa9.81□□□□□ -0.84
TNPO1-204ENST00000506351 YTHDC2Q9H6S0 1430 aaKnown RBP9.81□□□□□ -0.84
TNPO1-204ENST00000506351 DLC1Q96QB1 1528 aa9.8□□□□□ -0.84
TNPO1-204ENST00000506351 NSD3Q9BZ95 1437 aa9.8□□□□□ -0.84
TNPO1-204ENST00000506351 RIMS2Q9UQ26 1411 aa9.8□□□□□ -0.84
TNPO1-204ENST00000506351 MLECQ14165 292 aa9.8□□□□□ -0.84
TNPO1-204ENST00000506351 CARD14Q9BXL6 1004 aa9.8□□□□□ -0.84
TNPO1-204ENST00000506351 C3P01024 1663 aa9.79□□□□□ -0.84
TNPO1-204ENST00000506351 IRX6P78412 446 aaPredicted RBP9.79□□□□□ -0.84
TNPO1-204ENST00000506351 SENP3-EIF4A1A0A087X0R7 540 aa9.79□□□□□ -0.84
TNPO1-204ENST00000506351 ERICH6BQ5W0A0 696 aa9.78□□□□□ -0.84
TNPO1-204ENST00000506351 EVC2Q86UK5 1308 aa9.78□□□□□ -0.84
TNPO1-204ENST00000506351 PUS7Q96PZ0 661 aaKnown RBP9.78□□□□□ -0.84
TNPO1-204ENST00000506351 ZMYM3Q14202 1370 aa9.77□□□□□ -0.84
TNPO1-204ENST00000506351 STAG3Q9UJ98 1225 aa9.77□□□□□ -0.85
TNPO1-204ENST00000506351 RNF123Q5XPI4 1314 aa9.77□□□□□ -0.85
TNPO1-204ENST00000506351 ANKRD36BQ8N2N9 1353 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms