RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 ILDR1Q86SU0 546 aaPredicted RBP26.55■■□□□ 1.84
SMN1-204ENST00000506163 SENP3Q9H4L4 574 aaPredicted RBP26.53■■□□□ 1.84
SMN1-204ENST00000506163 HRCP23327 699 aa26.51■■□□□ 1.83
SMN1-204ENST00000506163 ACIN1Q9UKV3 1341 aaKnown RBP26.5■■□□□ 1.83
SMN1-204ENST00000506163 SLC26A8Q96RN1 970 aa26.49■■□□□ 1.83
SMN1-204ENST00000506163 FBXO41Q8TF61 875 aa26.48■■□□□ 1.83
SMN1-204ENST00000506163 STRCP1A6NGW2 1772 aa26.47■■□□□ 1.83
SMN1-204ENST00000506163 PLEKHG1Q9ULL1 1385 aa26.46■■□□□ 1.83
SMN1-204ENST00000506163 HDGFP51858 240 aaKnown RBP26.46■■□□□ 1.83
SMN1-204ENST00000506163 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.46■■□□□ 1.83
SMN1-204ENST00000506163 PPP1R15AO75807 674 aaPredicted RBP26.45■■□□□ 1.82
SMN1-204ENST00000506163 ZNF326Q5BKZ1 582 aaKnown RBP26.44■■□□□ 1.82
SMN1-204ENST00000506163 KIF1BO60333 1816 aa26.42■■□□□ 1.82
SMN1-204ENST00000506163 BCANQ96GW7 911 aa26.41■■□□□ 1.82
SMN1-204ENST00000506163 CPS1P31327 1500 aa26.4■■□□□ 1.82
SMN1-204ENST00000506163 ADAMTS13Q76LX8 1427 aa26.39■■□□□ 1.82
SMN1-204ENST00000506163 NEXMIFQ5QGS0 1516 aa26.39■■□□□ 1.82
SMN1-204ENST00000506163 CCDC144AA2RUR9 1427 aa26.38■■□□□ 1.81
SMN1-204ENST00000506163 IQSEC2Q5JU85 1478 aa26.37■■□□□ 1.81
SMN1-204ENST00000506163 TBX22Q9Y458 520 aa26.36■■□□□ 1.81
SMN1-204ENST00000506163 SPATA31E1Q6ZUB1 1445 aa26.35■■□□□ 1.81
SMN1-204ENST00000506163 ANKRD30BQ9BXX2 1392 aa26.35■■□□□ 1.81
SMN1-204ENST00000506163 KCNA6P17658 529 aa26.35■■□□□ 1.81
SMN1-204ENST00000506163 LRRC7Q96NW7 1537 aa26.35■■□□□ 1.81
SMN1-204ENST00000506163 RGL3Q3MIN7 710 aa26.32■■□□□ 1.8
SMN1-204ENST00000506163 NRXN3Q9Y4C0 1643 aa26.32■■□□□ 1.8
SMN1-204ENST00000506163 RPGRIP1LQ68CZ1 1315 aa26.31■■□□□ 1.8
SMN1-204ENST00000506163 TRIM26Q12899 539 aaPredicted RBP26.3■■□□□ 1.8
SMN1-204ENST00000506163 SETBP1Q9Y6X0 1596 aa26.28■■□□□ 1.8
SMN1-204ENST00000506163 RBM33Q96EV2 1170 aaKnown RBP26.27■■□□□ 1.8
SMN1-204ENST00000506163 CHD2O14647 1828 aaKnown RBP26.27■■□□□ 1.8
SMN1-204ENST00000506163 PPLO60437 1756 aa26.26■■□□□ 1.79
SMN1-204ENST00000506163 VGFO15240 615 aaPredicted RBP26.26■■□□□ 1.79
SMN1-204ENST00000506163 PTPRUQ92729 1446 aa26.26■■□□□ 1.79
SMN1-204ENST00000506163 NWD1Q149M9 1564 aa26.26■■□□□ 1.79
SMN1-204ENST00000506163 UBAP1LF5GYI3 381 aa26.25■■□□□ 1.79
SMN1-204ENST00000506163 XIRP1Q702N8 1843 aaKnown RBP26.25■■□□□ 1.79
SMN1-204ENST00000506163 METP08581 1390 aa26.24■■□□□ 1.79
SMN1-204ENST00000506163 DIP2AQ14689 1571 aa26.24■■□□□ 1.79
SMN1-204ENST00000506163 ADGRF5Q8IZF2 1346 aa26.23■■□□□ 1.79
SMN1-204ENST00000506163 PROSER2Q86WR7 435 aaPredicted RBP26.22■■□□□ 1.79
SMN1-204ENST00000506163 TMEM94Q12767 1356 aa26.22■■□□□ 1.79
SMN1-204ENST00000506163 ALKQ9UM73 1620 aa26.21■■□□□ 1.79
SMN1-204ENST00000506163 PIK3R4Q99570 1358 aa26.21■■□□□ 1.79
SMN1-204ENST00000506163 AMOTL2Q9Y2J4 779 aa26.19■■□□□ 1.78
SMN1-204ENST00000506163 NKTRP30414 1462 aaKnown RBP26.19■■□□□ 1.78
SMN1-204ENST00000506163 IFT172Q9UG01 1749 aa26.18■■□□□ 1.78
SMN1-204ENST00000506163 SETD1AO15047 1707 aaKnown RBP26.15■■□□□ 1.78
SMN1-204ENST00000506163 TOM1O60784 492 aa26.14■■□□□ 1.78
SMN1-204ENST00000506163 PIP4K2BP78356 416 aa26.12■■□□□ 1.77
SMN1-204ENST00000506163 XRN1Q8IZH2 1706 aaKnown RBP26.11■■□□□ 1.77
SMN1-204ENST00000506163 PIK3C2GO75747 1445 aa26.09■■□□□ 1.77
SMN1-204ENST00000506163 DHX57Q6P158 1386 aaKnown RBP26.08■■□□□ 1.77
SMN1-204ENST00000506163 NRXN1Q9ULB1 1477 aa26.08■■□□□ 1.77
SMN1-204ENST00000506163 MYOM2P54296 1465 aa26.06■■□□□ 1.76
SMN1-204ENST00000506163 SCAF1Q9H7N4 1312 aaKnown RBP26.05■■□□□ 1.76
SMN1-204ENST00000506163 DCAF11Q8TEB1 546 aa26.05■■□□□ 1.76
SMN1-204ENST00000506163 KDM2AQ9Y2K7 1162 aa26.05■■□□□ 1.76
SMN1-204ENST00000506163 TMEM132EQ6IEE7 984 aa26.04■■□□□ 1.76
SMN1-204ENST00000506163 C14orf93Q9H972 538 aaKnown RBP26.04■■□□□ 1.76
SMN1-204ENST00000506163 NCOA3Q9Y6Q9 1424 aa26.03■■□□□ 1.76
SMN1-204ENST00000506163 CFAP70Q5T0N1 1121 aa26.03■■□□□ 1.76
SMN1-204ENST00000506163 SIN3AQ96ST3 1273 aa26.03■■□□□ 1.76
SMN1-204ENST00000506163 ASXL1Q8IXJ9 1541 aa26.03■■□□□ 1.76
SMN1-204ENST00000506163 ROBO2Q9HCK4 1378 aa26.02■■□□□ 1.76
SMN1-204ENST00000506163 MSH6P52701 1360 aa26.01■■□□□ 1.75
SMN1-204ENST00000506163 C14orf37Q86TY3 774 aa25.99■■□□□ 1.75
SMN1-204ENST00000506163 C19orf44Q9H6X5 657 aa25.99■■□□□ 1.75
SMN1-204ENST00000506163 PRAG1Q86YV5 1406 aa25.98■■□□□ 1.75
SMN1-204ENST00000506163 HSPA1LP34931 641 aa25.97■■□□□ 1.75
SMN1-204ENST00000506163 STK26Q9P289 416 aa25.97■■□□□ 1.75
SMN1-204ENST00000506163 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.96■■□□□ 1.75
SMN1-204ENST00000506163 PTCH1Q13635 1447 aa25.96■■□□□ 1.75
SMN1-204ENST00000506163 SLAIN2Q9P270 581 aa25.96■■□□□ 1.75
SMN1-204ENST00000506163 LRPPRCP42704 1394 aaKnown RBP25.95■■□□□ 1.75
SMN1-204ENST00000506163 PCGF6Q9BYE7 350 aa25.93■■□□□ 1.74
SMN1-204ENST00000506163 ABCC11Q96J66 1382 aa25.93■■□□□ 1.74
SMN1-204ENST00000506163 FAM135BQ49AJ0 1406 aa25.92■■□□□ 1.74
SMN1-204ENST00000506163 NEUROD1Q13562 356 aa25.92■■□□□ 1.74
SMN1-204ENST00000506163 STAC3Q96MF2 364 aa25.92■■□□□ 1.74
SMN1-204ENST00000506163 TECPR2O15040 1411 aa25.91■■□□□ 1.74
SMN1-204ENST00000506163 YTHDC2Q9H6S0 1430 aaKnown RBP25.91■■□□□ 1.74
SMN1-204ENST00000506163 WAPLQ7Z5K2 1190 aa25.91■■□□□ 1.74
SMN1-204ENST00000506163 L3MBTL2Q969R5 705 aa25.9■■□□□ 1.74
SMN1-204ENST00000506163 ADGRL3Q9HAR2 1447 aa25.9■■□□□ 1.74
SMN1-204ENST00000506163 ATF3P18847 181 aa25.89■■□□□ 1.74
SMN1-204ENST00000506163 CADPS2Q86UW7 1296 aa25.89■■□□□ 1.74
SMN1-204ENST00000506163 PLEKHH1Q9ULM0 1364 aa25.89■■□□□ 1.73
SMN1-204ENST00000506163 ADGRB1O14514 1584 aa25.88■■□□□ 1.73
SMN1-204ENST00000506163 NALCNQ8IZF0 1738 aa25.88■■□□□ 1.73
SMN1-204ENST00000506163 LAMC1P11047 1609 aa25.86■■□□□ 1.73
SMN1-204ENST00000506163 ROBO1Q9Y6N7 1651 aa25.86■■□□□ 1.73
SMN1-204ENST00000506163 DCCP43146 1447 aa25.86■■□□□ 1.73
SMN1-204ENST00000506163 KNDC1Q76NI1 1749 aa25.84■■□□□ 1.73
SMN1-204ENST00000506163 SIRT1Q96EB6 747 aa25.83■■□□□ 1.73
SMN1-204ENST00000506163 MST1RQ04912 1400 aa25.83■■□□□ 1.72
SMN1-204ENST00000506163 NBPF1Q3BBV0 1214 aa25.8■■□□□ 1.72
SMN1-204ENST00000506163 BRINP3Q76B58 766 aa25.8■■□□□ 1.72
SMN1-204ENST00000506163 TRAK1Q9UPV9 953 aa25.8■■□□□ 1.72
SMN1-204ENST00000506163 PRAM1Q96QH2 718 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms