RNA–Protein interactions for RNA: ENST00000505496.6

CTSB-205, Transcript of cathepsin B, humanhuman

TSL 4

Gene CTSB, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-205ENST00000505496 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTSB-205ENST00000505496 PLEKHG1Q9ULL1 1385 aa12.94□□□□□ -0.34
CTSB-205ENST00000505496 CHGAP10645 457 aaKnown RBP12.93□□□□□ -0.34
CTSB-205ENST00000505496 IQSEC2Q5JU85 1478 aa12.91□□□□□ -0.34
CTSB-205ENST00000505496 CCDC144AA2RUR9 1427 aa12.9□□□□□ -0.34
CTSB-205ENST00000505496 CPS1P31327 1500 aa12.9□□□□□ -0.34
CTSB-205ENST00000505496 RPGRIP1LQ68CZ1 1315 aa12.89□□□□□ -0.35
CTSB-205ENST00000505496 SPATA31E1Q6ZUB1 1445 aa12.89□□□□□ -0.35
CTSB-205ENST00000505496 FBXO41Q8TF61 875 aa12.89□□□□□ -0.35
CTSB-205ENST00000505496 MYO5BQ9ULV0 1848 aa12.89□□□□□ -0.35
CTSB-205ENST00000505496 ANKRD30BQ9BXX2 1392 aa12.89□□□□□ -0.35
CTSB-205ENST00000505496 ADAMTS13Q76LX8 1427 aa12.88□□□□□ -0.35
CTSB-205ENST00000505496 PPP1R15AO75807 674 aaPredicted RBP12.88□□□□□ -0.35
CTSB-205ENST00000505496 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
CTSB-205ENST00000505496 NEXMIFQ5QGS0 1516 aa12.88□□□□□ -0.35
CTSB-205ENST00000505496 TRIM26Q12899 539 aaPredicted RBP12.87□□□□□ -0.35
CTSB-205ENST00000505496 ZNF326Q5BKZ1 582 aaKnown RBP12.87□□□□□ -0.35
CTSB-205ENST00000505496 SLC26A8Q96RN1 970 aa12.87□□□□□ -0.35
CTSB-205ENST00000505496 KCNA6P17658 529 aa12.86□□□□□ -0.35
CTSB-205ENST00000505496 NUTM2DQ5VT03 806 aaPredicted RBP12.86□□□□□ -0.35
CTSB-205ENST00000505496 PIK3R4Q99570 1358 aa12.85□□□□□ -0.35
CTSB-205ENST00000505496 ILDR1Q86SU0 546 aaPredicted RBP12.85□□□□□ -0.35
CTSB-205ENST00000505496 DIP2AQ14689 1571 aa12.85□□□□□ -0.35
CTSB-205ENST00000505496 SETBP1Q9Y6X0 1596 aa12.85□□□□□ -0.35
CTSB-205ENST00000505496 LRRC7Q96NW7 1537 aa12.84□□□□□ -0.35
CTSB-205ENST00000505496 VGFO15240 615 aaPredicted RBP12.84□□□□□ -0.35
CTSB-205ENST00000505496 KIF1BO60333 1816 aa12.83□□□□□ -0.35
CTSB-205ENST00000505496 NWD1Q149M9 1564 aa12.83□□□□□ -0.36
CTSB-205ENST00000505496 STRCP1A6NGW2 1772 aa12.83□□□□□ -0.36
CTSB-205ENST00000505496 NRXN3Q9Y4C0 1643 aa12.82□□□□□ -0.36
CTSB-205ENST00000505496 BCANQ96GW7 911 aa12.82□□□□□ -0.36
CTSB-205ENST00000505496 NKTRP30414 1462 aaKnown RBP12.82□□□□□ -0.36
CTSB-205ENST00000505496 RGL3Q3MIN7 710 aa12.79□□□□□ -0.36
CTSB-205ENST00000505496 METP08581 1390 aa12.79□□□□□ -0.36
CTSB-205ENST00000505496 PTPRUQ92729 1446 aa12.79□□□□□ -0.36
CTSB-205ENST00000505496 SENP3Q9H4L4 574 aaPredicted RBP12.78□□□□□ -0.36
CTSB-205ENST00000505496 ADGRF5Q8IZF2 1346 aa12.78□□□□□ -0.36
CTSB-205ENST00000505496 PPLO60437 1756 aa12.78□□□□□ -0.36
CTSB-205ENST00000505496 TMEM94Q12767 1356 aa12.78□□□□□ -0.36
CTSB-205ENST00000505496 NCOA3Q9Y6Q9 1424 aa12.78□□□□□ -0.36
CTSB-205ENST00000505496 NRXN1Q9ULB1 1477 aa12.78□□□□□ -0.36
CTSB-205ENST00000505496 PRAG1Q86YV5 1406 aa12.77□□□□□ -0.37
CTSB-205ENST00000505496 MYOM2P54296 1465 aa12.77□□□□□ -0.37
CTSB-205ENST00000505496 CHD2O14647 1828 aaKnown RBP12.76□□□□□ -0.37
CTSB-205ENST00000505496 PROSER2Q86WR7 435 aaPredicted RBP12.76□□□□□ -0.37
CTSB-205ENST00000505496 STAC3Q96MF2 364 aa12.76□□□□□ -0.37
CTSB-205ENST00000505496 AMOTL2Q9Y2J4 779 aa12.76□□□□□ -0.37
CTSB-205ENST00000505496 PIK3C2GO75747 1445 aa12.76□□□□□ -0.37
CTSB-205ENST00000505496 ALKQ9UM73 1620 aa12.76□□□□□ -0.37
CTSB-205ENST00000505496 UBAP1LF5GYI3 381 aa12.75□□□□□ -0.37
CTSB-205ENST00000505496 DHX57Q6P158 1386 aaKnown RBP12.75□□□□□ -0.37
CTSB-205ENST00000505496 IFT172Q9UG01 1749 aa12.75□□□□□ -0.37
CTSB-205ENST00000505496 TOM1O60784 492 aa12.74□□□□□ -0.37
CTSB-205ENST00000505496 SETD1AO15047 1707 aaKnown RBP12.74□□□□□ -0.37
CTSB-205ENST00000505496 XRN1Q8IZH2 1706 aaKnown RBP12.74□□□□□ -0.37
CTSB-205ENST00000505496 PTCH1Q13635 1447 aa12.72□□□□□ -0.37
CTSB-205ENST00000505496 XIRP1Q702N8 1843 aaKnown RBP12.72□□□□□ -0.37
CTSB-205ENST00000505496 C14orf93Q9H972 538 aaKnown RBP12.72□□□□□ -0.37
CTSB-205ENST00000505496 RBM33Q96EV2 1170 aaKnown RBP12.71□□□□□ -0.37
CTSB-205ENST00000505496 TECPR2O15040 1411 aa12.7□□□□□ -0.38
CTSB-205ENST00000505496 MSH6P52701 1360 aa12.69□□□□□ -0.38
CTSB-205ENST00000505496 ASXL1Q8IXJ9 1541 aa12.69□□□□□ -0.38
CTSB-205ENST00000505496 DCAF11Q8TEB1 546 aa12.69□□□□□ -0.38
CTSB-205ENST00000505496 C19orf44Q9H6X5 657 aa12.69□□□□□ -0.38
CTSB-205ENST00000505496 LRPPRCP42704 1394 aaKnown RBP12.69□□□□□ -0.38
CTSB-205ENST00000505496 ABCC11Q96J66 1382 aa12.69□□□□□ -0.38
CTSB-205ENST00000505496 ROBO2Q9HCK4 1378 aa12.69□□□□□ -0.38
CTSB-205ENST00000505496 DCCP43146 1447 aa12.68□□□□□ -0.38
CTSB-205ENST00000505496 CFAP70Q5T0N1 1121 aa12.67□□□□□ -0.38
CTSB-205ENST00000505496 FAM135BQ49AJ0 1406 aa12.67□□□□□ -0.38
CTSB-205ENST00000505496 TMEM132EQ6IEE7 984 aa12.66□□□□□ -0.38
CTSB-205ENST00000505496 CADPS2Q86UW7 1296 aa12.66□□□□□ -0.38
CTSB-205ENST00000505496 SIRT1Q96EB6 747 aa12.66□□□□□ -0.38
CTSB-205ENST00000505496 SIN3AQ96ST3 1273 aa12.66□□□□□ -0.38
CTSB-205ENST00000505496 ADGRB1O14514 1584 aa12.65□□□□□ -0.38
CTSB-205ENST00000505496 YTHDC2Q9H6S0 1430 aaKnown RBP12.65□□□□□ -0.38
CTSB-205ENST00000505496 ADGRL3Q9HAR2 1447 aa12.65□□□□□ -0.38
CTSB-205ENST00000505496 PIP4K2BP78356 416 aa12.65□□□□□ -0.38
CTSB-205ENST00000505496 SLAIN2Q9P270 581 aa12.65□□□□□ -0.38
CTSB-205ENST00000505496 KDM2AQ9Y2K7 1162 aa12.65□□□□□ -0.38
CTSB-205ENST00000505496 LAMC1P11047 1609 aa12.64□□□□□ -0.39
CTSB-205ENST00000505496 L3MBTL2Q969R5 705 aa12.63□□□□□ -0.39
CTSB-205ENST00000505496 PCGF6Q9BYE7 350 aa12.63□□□□□ -0.39
CTSB-205ENST00000505496 ATF3P18847 181 aa12.62□□□□□ -0.39
CTSB-205ENST00000505496 C14orf37Q86TY3 774 aa12.62□□□□□ -0.39
CTSB-205ENST00000505496 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.62□□□□□ -0.39
CTSB-205ENST00000505496 HSPA1LP34931 641 aa12.61□□□□□ -0.39
CTSB-205ENST00000505496 STK26Q9P289 416 aa12.61□□□□□ -0.39
CTSB-205ENST00000505496 DLC1Q96QB1 1528 aa12.61□□□□□ -0.39
CTSB-205ENST00000505496 SCAF1Q9H7N4 1312 aaKnown RBP12.61□□□□□ -0.39
CTSB-205ENST00000505496 KNDC1Q76NI1 1749 aa12.6□□□□□ -0.39
CTSB-205ENST00000505496 NEUROD1Q13562 356 aa12.6□□□□□ -0.39
CTSB-205ENST00000505496 WAPLQ7Z5K2 1190 aa12.6□□□□□ -0.39
CTSB-205ENST00000505496 MST1RQ04912 1400 aa12.6□□□□□ -0.39
CTSB-205ENST00000505496 PLEKHH1Q9ULM0 1364 aa12.59□□□□□ -0.39
CTSB-205ENST00000505496 NALCNQ8IZF0 1738 aa12.58□□□□□ -0.4
CTSB-205ENST00000505496 CLSPNQ9HAW4 1339 aa12.58□□□□□ -0.4
CTSB-205ENST00000505496 BRINP3Q76B58 766 aa12.57□□□□□ -0.4
CTSB-205ENST00000505496 C1orf167Q5SNV9 1468 aa12.57□□□□□ -0.4
CTSB-205ENST00000505496 ROBO1Q9Y6N7 1651 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms