RNA–Protein interactions for RNA: ENST00000504911.1

AP002748.1-201, humanhuman

TSL 3 BASIC

Gene AP002748.1, Length 580 nt, Biotype lincRNA.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP002748.1-201ENST00000504911 CPS1P31327 1500 aa31.77■■■□□ 2.68
AP002748.1-201ENST00000504911 RAB3GAP2Q9H2M9 1393 aa31.76■■■□□ 2.67
AP002748.1-201ENST00000504911 CLTCL1P53675 1640 aa31.75■■■□□ 2.67
AP002748.1-201ENST00000504911 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.74■■■□□ 2.67
AP002748.1-201ENST00000504911 MPHOSPH9Q99550 1183 aa31.72■■■□□ 2.67
AP002748.1-201ENST00000504911 PLEKHG1Q9ULL1 1385 aa31.7■■■□□ 2.67
AP002748.1-201ENST00000504911 PPP1R15AO75807 674 aaPredicted RBP31.68■■■□□ 2.66
AP002748.1-201ENST00000504911 HRCP23327 699 aa31.67■■■□□ 2.66
AP002748.1-201ENST00000504911 KIF1BO60333 1816 aa31.67■■■□□ 2.66
AP002748.1-201ENST00000504911 STRCP1A6NGW2 1772 aa31.63■■■□□ 2.65
AP002748.1-201ENST00000504911 FOXD1Q16676 465 aa31.61■■■□□ 2.65
AP002748.1-201ENST00000504911 ZNF326Q5BKZ1 582 aaKnown RBP31.6■■■□□ 2.65
AP002748.1-201ENST00000504911 SLC26A8Q96RN1 970 aa31.6■■■□□ 2.65
AP002748.1-201ENST00000504911 BCANQ96GW7 911 aa31.59■■■□□ 2.65
AP002748.1-201ENST00000504911 CCDC144AA2RUR9 1427 aa31.58■■■□□ 2.65
AP002748.1-201ENST00000504911 DIP2AQ14689 1571 aa31.57■■■□□ 2.64
AP002748.1-201ENST00000504911 NEXMIFQ5QGS0 1516 aa31.56■■■□□ 2.64
AP002748.1-201ENST00000504911 TBX22Q9Y458 520 aa31.55■■■□□ 2.64
AP002748.1-201ENST00000504911 LRRC7Q96NW7 1537 aa31.54■■■□□ 2.64
AP002748.1-201ENST00000504911 KCNA6P17658 529 aa31.54■■■□□ 2.64
AP002748.1-201ENST00000504911 NUTM2DQ5VT03 806 aaPredicted RBP31.54■■■□□ 2.64
AP002748.1-201ENST00000504911 NWD1Q149M9 1564 aa31.53■■■□□ 2.64
AP002748.1-201ENST00000504911 ADAMTS13Q76LX8 1427 aa31.53■■■□□ 2.64
AP002748.1-201ENST00000504911 SETBP1Q9Y6X0 1596 aa31.51■■■□□ 2.64
AP002748.1-201ENST00000504911 RPGRIP1LQ68CZ1 1315 aa31.51■■■□□ 2.64
AP002748.1-201ENST00000504911 NKTRP30414 1462 aaKnown RBP31.49■■■□□ 2.63
AP002748.1-201ENST00000504911 PIK3R4Q99570 1358 aa31.48■■■□□ 2.63
AP002748.1-201ENST00000504911 CHD2O14647 1828 aaKnown RBP31.47■■■□□ 2.63
AP002748.1-201ENST00000504911 NRXN3Q9Y4C0 1643 aa31.46■■■□□ 2.63
AP002748.1-201ENST00000504911 SPATA31E1Q6ZUB1 1445 aa31.45■■■□□ 2.63
AP002748.1-201ENST00000504911 SENP3Q9H4L4 574 aaPredicted RBP31.45■■■□□ 2.63
AP002748.1-201ENST00000504911 UBAP1LF5GYI3 381 aa31.44■■■□□ 2.62
AP002748.1-201ENST00000504911 VGFO15240 615 aaPredicted RBP31.44■■■□□ 2.62
AP002748.1-201ENST00000504911 PPLO60437 1756 aa31.43■■■□□ 2.62
AP002748.1-201ENST00000504911 TOM1O60784 492 aa31.4■■■□□ 2.62
AP002748.1-201ENST00000504911 XIRP1Q702N8 1843 aaKnown RBP31.39■■■□□ 2.62
AP002748.1-201ENST00000504911 ANKRD30BQ9BXX2 1392 aa31.39■■■□□ 2.62
AP002748.1-201ENST00000504911 PROSER2Q86WR7 435 aaPredicted RBP31.37■■■□□ 2.61
AP002748.1-201ENST00000504911 TMEM94Q12767 1356 aa31.37■■■□□ 2.61
AP002748.1-201ENST00000504911 IFT172Q9UG01 1749 aa31.34■■■□□ 2.61
AP002748.1-201ENST00000504911 RGL3Q3MIN7 710 aa31.33■■■□□ 2.61
AP002748.1-201ENST00000504911 ALKQ9UM73 1620 aa31.31■■■□□ 2.6
AP002748.1-201ENST00000504911 PTPRUQ92729 1446 aa31.31■■■□□ 2.6
AP002748.1-201ENST00000504911 NCOA3Q9Y6Q9 1424 aa31.31■■■□□ 2.6
AP002748.1-201ENST00000504911 METP08581 1390 aa31.3■■■□□ 2.6
AP002748.1-201ENST00000504911 XRN1Q8IZH2 1706 aaKnown RBP31.29■■■□□ 2.6
AP002748.1-201ENST00000504911 AMOTL2Q9Y2J4 779 aa31.29■■■□□ 2.6
AP002748.1-201ENST00000504911 SETD1AO15047 1707 aaKnown RBP31.28■■■□□ 2.6
AP002748.1-201ENST00000504911 TRIM26Q12899 539 aaPredicted RBP31.26■■■□□ 2.59
AP002748.1-201ENST00000504911 ADGRF5Q8IZF2 1346 aa31.24■■■□□ 2.59
AP002748.1-201ENST00000504911 MSH6P52701 1360 aa31.23■■■□□ 2.59
AP002748.1-201ENST00000504911 MYOM2P54296 1465 aa31.22■■■□□ 2.59
AP002748.1-201ENST00000504911 PIP4K2BP78356 416 aa31.22■■■□□ 2.59
AP002748.1-201ENST00000504911 RBM33Q96EV2 1170 aaKnown RBP31.21■■■□□ 2.59
AP002748.1-201ENST00000504911 SCAF1Q9H7N4 1312 aaKnown RBP31.21■■■□□ 2.59
AP002748.1-201ENST00000504911 PIK3C2GO75747 1445 aa31.2■■■□□ 2.59
AP002748.1-201ENST00000504911 PRAG1Q86YV5 1406 aa31.19■■■□□ 2.58
AP002748.1-201ENST00000504911 NRXN1Q9ULB1 1477 aa31.18■■■□□ 2.58
AP002748.1-201ENST00000504911 PTCH1Q13635 1447 aa31.15■■■□□ 2.58
AP002748.1-201ENST00000504911 STAC3Q96MF2 364 aa31.13■■■□□ 2.57
AP002748.1-201ENST00000504911 C14orf37Q86TY3 774 aa31.12■■■□□ 2.57
AP002748.1-201ENST00000504911 C19orf44Q9H6X5 657 aa31.12■■■□□ 2.57
AP002748.1-201ENST00000504911 FAM135BQ49AJ0 1406 aa31.11■■■□□ 2.57
AP002748.1-201ENST00000504911 LAMC1P11047 1609 aa31.1■■■□□ 2.57
AP002748.1-201ENST00000504911 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.1■■■□□ 2.57
AP002748.1-201ENST00000504911 DCCP43146 1447 aa31.09■■■□□ 2.57
AP002748.1-201ENST00000504911 CADPS2Q86UW7 1296 aa31.07■■■□□ 2.56
AP002748.1-201ENST00000504911 C14orf93Q9H972 538 aaKnown RBP31.07■■■□□ 2.56
AP002748.1-201ENST00000504911 ASXL1Q8IXJ9 1541 aa31.06■■■□□ 2.56
AP002748.1-201ENST00000504911 HSPA1LP34931 641 aa31.05■■■□□ 2.56
AP002748.1-201ENST00000504911 TECPR2O15040 1411 aa31.05■■■□□ 2.56
AP002748.1-201ENST00000504911 ADGRL3Q9HAR2 1447 aa31.05■■■□□ 2.56
AP002748.1-201ENST00000504911 LRPPRCP42704 1394 aaKnown RBP31.05■■■□□ 2.56
AP002748.1-201ENST00000504911 ROBO2Q9HCK4 1378 aa31.05■■■□□ 2.56
AP002748.1-201ENST00000504911 ATF3P18847 181 aa31.04■■■□□ 2.56
AP002748.1-201ENST00000504911 SLAIN2Q9P270 581 aa31.04■■■□□ 2.56
AP002748.1-201ENST00000504911 DHX57Q6P158 1386 aaKnown RBP31.04■■■□□ 2.56
AP002748.1-201ENST00000504911 DCAF11Q8TEB1 546 aa31.03■■■□□ 2.56
AP002748.1-201ENST00000504911 ABCC11Q96J66 1382 aa31.02■■■□□ 2.56
AP002748.1-201ENST00000504911 KNDC1Q76NI1 1749 aa31.01■■■□□ 2.56
AP002748.1-201ENST00000504911 ROBO1Q9Y6N7 1651 aa31.01■■■□□ 2.55
AP002748.1-201ENST00000504911 NALCNQ8IZF0 1738 aa31■■■□□ 2.55
AP002748.1-201ENST00000504911 YTHDC2Q9H6S0 1430 aaKnown RBP30.98■■■□□ 2.55
AP002748.1-201ENST00000504911 CFAP70Q5T0N1 1121 aa30.98■■■□□ 2.55
AP002748.1-201ENST00000504911 TMEM132EQ6IEE7 984 aa30.98■■■□□ 2.55
AP002748.1-201ENST00000504911 KDM2AQ9Y2K7 1162 aa30.97■■■□□ 2.55
AP002748.1-201ENST00000504911 STK26Q9P289 416 aa30.93■■■□□ 2.54
AP002748.1-201ENST00000504911 SIRT1Q96EB6 747 aa30.92■■■□□ 2.54
AP002748.1-201ENST00000504911 MST1RQ04912 1400 aa30.91■■■□□ 2.54
AP002748.1-201ENST00000504911 ADGRB1O14514 1584 aa30.91■■■□□ 2.54
AP002748.1-201ENST00000504911 DLC1Q96QB1 1528 aa30.87■■■□□ 2.53
AP002748.1-201ENST00000504911 CDC42BPGQ6DT37 1551 aa30.86■■■□□ 2.53
AP002748.1-201ENST00000504911 SIN3AQ96ST3 1273 aa30.85■■■□□ 2.53
AP002748.1-201ENST00000504911 WAPLQ7Z5K2 1190 aa30.84■■■□□ 2.53
AP002748.1-201ENST00000504911 KIAA1210Q9ULL0 1709 aa30.84■■■□□ 2.53
AP002748.1-201ENST00000504911 AHDC1Q5TGY3 1603 aaPredicted RBP30.83■■■□□ 2.53
AP002748.1-201ENST00000504911 PLEKHH1Q9ULM0 1364 aa30.82■■■□□ 2.52
AP002748.1-201ENST00000504911 PHLPP1O60346 1717 aa30.82■■■□□ 2.52
AP002748.1-201ENST00000504911 BRINP3Q76B58 766 aa30.82■■■□□ 2.52
AP002748.1-201ENST00000504911 C1orf167Q5SNV9 1468 aa30.81■■■□□ 2.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms