RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 TMEM2Q9UHN6 1383 aa19.32■□□□□ 0.68
PDLIM7-212ENST00000504380 LTKP29376 864 aa19.32■□□□□ 0.68
PDLIM7-212ENST00000504380 KDM5AP29375 1690 aaKnown RBP19.32■□□□□ 0.68
PDLIM7-212ENST00000504380 SPATA31E1Q6ZUB1 1445 aa19.32■□□□□ 0.68
PDLIM7-212ENST00000504380 STRCQ7RTU9 1775 aa19.32■□□□□ 0.68
PDLIM7-212ENST00000504380 TXNDC2Q86VQ3 553 aa19.31■□□□□ 0.68
PDLIM7-212ENST00000504380 RIMS2Q9UQ26 1411 aa19.31■□□□□ 0.68
PDLIM7-212ENST00000504380 ARHGAP23Q9P227 1491 aa19.29■□□□□ 0.68
PDLIM7-212ENST00000504380 ANKLE2Q86XL3 938 aa19.29■□□□□ 0.68
PDLIM7-212ENST00000504380 SLIT1O75093 1534 aa19.29■□□□□ 0.68
PDLIM7-212ENST00000504380 IQSEC2Q5JU85 1478 aa19.28■□□□□ 0.68
PDLIM7-212ENST00000504380 ZFYVE9O95405 1425 aa19.27■□□□□ 0.68
PDLIM7-212ENST00000504380 EID1Q9Y6B2 187 aa19.27■□□□□ 0.68
PDLIM7-212ENST00000504380 NEXMIFQ5QGS0 1516 aa19.25■□□□□ 0.67
PDLIM7-212ENST00000504380 LTBP4Q8N2S1 1624 aa19.25■□□□□ 0.67
PDLIM7-212ENST00000504380 SCAF11Q99590 1463 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-212ENST00000504380 PPP1R15AO75807 674 aaPredicted RBP19.25■□□□□ 0.67
PDLIM7-212ENST00000504380 KDM2AQ9Y2K7 1162 aa19.25■□□□□ 0.67
PDLIM7-212ENST00000504380 NEURL4Q96JN8 1562 aa19.23■□□□□ 0.67
PDLIM7-212ENST00000504380 POLR1AO95602 1720 aaPredicted RBP19.23■□□□□ 0.67
PDLIM7-212ENST00000504380 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.23■□□□□ 0.67
PDLIM7-212ENST00000504380 RPGRIP1LQ68CZ1 1315 aa19.23■□□□□ 0.67
PDLIM7-212ENST00000504380 PPLO60437 1756 aa19.22■□□□□ 0.67
PDLIM7-212ENST00000504380 DCAF11Q8TEB1 546 aa19.22■□□□□ 0.67
PDLIM7-212ENST00000504380 BCANQ96GW7 911 aa19.22■□□□□ 0.67
PDLIM7-212ENST00000504380 ADGRF5Q8IZF2 1346 aa19.22■□□□□ 0.67
PDLIM7-212ENST00000504380 HDGFP51858 240 aaKnown RBP19.21■□□□□ 0.67
PDLIM7-212ENST00000504380 L3MBTL2Q969R5 705 aa19.21■□□□□ 0.67
PDLIM7-212ENST00000504380 IFT172Q9UG01 1749 aa19.2■□□□□ 0.66
PDLIM7-212ENST00000504380 NPHP4O75161 1426 aaPredicted RBP19.2■□□□□ 0.66
PDLIM7-212ENST00000504380 CLSPNQ9HAW4 1339 aa19.19■□□□□ 0.66
PDLIM7-212ENST00000504380 VGFO15240 615 aaPredicted RBP19.18■□□□□ 0.66
PDLIM7-212ENST00000504380 SLC26A8Q96RN1 970 aa19.18■□□□□ 0.66
PDLIM7-212ENST00000504380 MED14O60244 1454 aa19.17■□□□□ 0.66
PDLIM7-212ENST00000504380 PLEKHG1Q9ULL1 1385 aa19.17■□□□□ 0.66
PDLIM7-212ENST00000504380 IQGAP1P46940 1657 aa19.16■□□□□ 0.66
PDLIM7-212ENST00000504380 TONSLQ96HA7 1378 aa19.15■□□□□ 0.66
PDLIM7-212ENST00000504380 NRXN3Q9Y4C0 1643 aa19.12■□□□□ 0.65
PDLIM7-212ENST00000504380 MYOM2P54296 1465 aa19.12■□□□□ 0.65
PDLIM7-212ENST00000504380 ADAMTS13Q76LX8 1427 aa19.12■□□□□ 0.65
PDLIM7-212ENST00000504380 CFAP70Q5T0N1 1121 aa19.1■□□□□ 0.65
PDLIM7-212ENST00000504380 SETBP1Q9Y6X0 1596 aa19.09■□□□□ 0.65
PDLIM7-212ENST00000504380 NRXN1Q9ULB1 1477 aa19.09■□□□□ 0.65
PDLIM7-212ENST00000504380 PIK3C2GO75747 1445 aa19.08■□□□□ 0.65
PDLIM7-212ENST00000504380 ALKQ9UM73 1620 aa19.08■□□□□ 0.65
PDLIM7-212ENST00000504380 ZNF335Q9H4Z2 1342 aaPredicted RBP19.07■□□□□ 0.64
PDLIM7-212ENST00000504380 UBAP1LF5GYI3 381 aa19.07■□□□□ 0.64
PDLIM7-212ENST00000504380 NBPF8Q3BBV2 869 aa19.07■□□□□ 0.64
PDLIM7-212ENST00000504380 TBX22Q9Y458 520 aa19.07■□□□□ 0.64
PDLIM7-212ENST00000504380 METP08581 1390 aa19.06■□□□□ 0.64
PDLIM7-212ENST00000504380 TMEM132EQ6IEE7 984 aa19.06■□□□□ 0.64
PDLIM7-212ENST00000504380 PRAG1Q86YV5 1406 aa19.06■□□□□ 0.64
PDLIM7-212ENST00000504380 STAC3Q96MF2 364 aa19.05■□□□□ 0.64
PDLIM7-212ENST00000504380 C14orf93Q9H972 538 aaKnown RBP19.05■□□□□ 0.64
PDLIM7-212ENST00000504380 SETD1AO15047 1707 aaKnown RBP19.04■□□□□ 0.64
PDLIM7-212ENST00000504380 DIP2AQ14689 1571 aa19.02■□□□□ 0.64
PDLIM7-212ENST00000504380 PTPRUQ92729 1446 aa19.02■□□□□ 0.64
PDLIM7-212ENST00000504380 NBPF1Q3BBV0 1214 aa19.02■□□□□ 0.64
PDLIM7-212ENST00000504380 STRCP1A6NGW2 1772 aa19.01■□□□□ 0.63
PDLIM7-212ENST00000504380 ASXL1Q8IXJ9 1541 aa19.01■□□□□ 0.63
PDLIM7-212ENST00000504380 STK26Q9P289 416 aa19.01■□□□□ 0.63
PDLIM7-212ENST00000504380 TIMELESSQ9UNS1 1208 aa19■□□□□ 0.63
PDLIM7-212ENST00000504380 KCNA6P17658 529 aa18.99■□□□□ 0.63
PDLIM7-212ENST00000504380 AMOTL2Q9Y2J4 779 aa18.99■□□□□ 0.63
PDLIM7-212ENST00000504380 CHD2O14647 1828 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-212ENST00000504380 RBM33Q96EV2 1170 aaKnown RBP18.98■□□□□ 0.63
PDLIM7-212ENST00000504380 LAMC1P11047 1609 aa18.96■□□□□ 0.63
PDLIM7-212ENST00000504380 TRPM1Q7Z4N2 1603 aa18.96■□□□□ 0.63
PDLIM7-212ENST00000504380 PIK3R4Q99570 1358 aa18.95■□□□□ 0.62
PDLIM7-212ENST00000504380 ADGRB1O14514 1584 aa18.95■□□□□ 0.62
PDLIM7-212ENST00000504380 KIAA1210Q9ULL0 1709 aa18.94■□□□□ 0.62
PDLIM7-212ENST00000504380 YTHDC2Q9H6S0 1430 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-212ENST00000504380 HSPA1LP34931 641 aa18.93■□□□□ 0.62
PDLIM7-212ENST00000504380 PROSER2Q86WR7 435 aaPredicted RBP18.93■□□□□ 0.62
PDLIM7-212ENST00000504380 TRAK1Q9UPV9 953 aa18.93■□□□□ 0.62
PDLIM7-212ENST00000504380 NWD1Q149M9 1564 aa18.93■□□□□ 0.62
PDLIM7-212ENST00000504380 LRPPRCP42704 1394 aaKnown RBP18.93■□□□□ 0.62
PDLIM7-212ENST00000504380 XRN1Q8IZH2 1706 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-212ENST00000504380 ROCK2O75116 1388 aaKnown RBP18.92■□□□□ 0.62
PDLIM7-212ENST00000504380 ROBO2Q9HCK4 1378 aa18.91■□□□□ 0.62
PDLIM7-212ENST00000504380 WAPLQ7Z5K2 1190 aa18.9■□□□□ 0.62
PDLIM7-212ENST00000504380 RALGAPBQ86X10 1494 aa18.9■□□□□ 0.62
PDLIM7-212ENST00000504380 LRRC7Q96NW7 1537 aa18.89■□□□□ 0.61
PDLIM7-212ENST00000504380 MED1Q15648 1581 aaPredicted RBP18.89■□□□□ 0.61
PDLIM7-212ENST00000504380 CARD11Q9BXL7 1154 aa18.88■□□□□ 0.61
PDLIM7-212ENST00000504380 ABCC11Q96J66 1382 aa18.88■□□□□ 0.61
PDLIM7-212ENST00000504380 PLEKHH1Q9ULM0 1364 aa18.88■□□□□ 0.61
PDLIM7-212ENST00000504380 TOM1O60784 492 aa18.87■□□□□ 0.61
PDLIM7-212ENST00000504380 CPS1P31327 1500 aa18.87■□□□□ 0.61
PDLIM7-212ENST00000504380 TMEM94Q12767 1356 aa18.87■□□□□ 0.61
PDLIM7-212ENST00000504380 SAFB2Q14151 953 aaKnown RBP eCLIP18.87■□□□□ 0.61
PDLIM7-212ENST00000504380 NKTRP30414 1462 aaKnown RBP18.86■□□□□ 0.61
PDLIM7-212ENST00000504380 PRAM1Q96QH2 718 aa18.86■□□□□ 0.61
PDLIM7-212ENST00000504380 KNDC1Q76NI1 1749 aa18.86■□□□□ 0.61
PDLIM7-212ENST00000504380 XIRP1Q702N8 1843 aaKnown RBP18.85■□□□□ 0.61
PDLIM7-212ENST00000504380 TECPR2O15040 1411 aa18.84■□□□□ 0.61
PDLIM7-212ENST00000504380 GPRASP1Q5JY77 1395 aa18.84■□□□□ 0.61
PDLIM7-212ENST00000504380 POGKQ9P215 609 aa18.84■□□□□ 0.61
PDLIM7-212ENST00000504380 PTCH1Q13635 1447 aa18.83■□□□□ 0.61
PDLIM7-212ENST00000504380 C14orf37Q86TY3 774 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms