RNA–Protein interactions for RNA: ENST00000503388.1

NDFIP1-202, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 2

Gene NDFIP1, Length 4,164 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-202ENST00000503388 AKAP12Q02952 1782 aa6.3□□□□□ -1.4
NDFIP1-202ENST00000503388 ANKRD30AQ9BXX3 1397 aa6.3□□□□□ -1.4
NDFIP1-202ENST00000503388 RPRD2Q5VT52 1461 aaKnown RBP6.3□□□□□ -1.4
NDFIP1-202ENST00000503388 GLI3P10071 1580 aa6.29□□□□□ -1.4
NDFIP1-202ENST00000503388 WDR43Q15061 677 aaKnown RBP eCLIP6.29□□□□□ -1.4
NDFIP1-202ENST00000503388 NGEFQ8N5V2 710 aa6.29□□□□□ -1.4
NDFIP1-202ENST00000503388 ZNF777Q9ULD5 760 aaPredicted RBP6.29□□□□□ -1.4
NDFIP1-202ENST00000503388 ABCC3O15438 1527 aa6.29□□□□□ -1.4
NDFIP1-202ENST00000503388 MYOM1P52179 1685 aa6.29□□□□□ -1.4
NDFIP1-202ENST00000503388 CFAP53Q96M91 514 aa6.29□□□□□ -1.4
NDFIP1-202ENST00000503388 RREB1Q92766 1687 aa6.29□□□□□ -1.4
NDFIP1-202ENST00000503388 HNRNPUQ00839 825 aaKnown RBP eCLIP6.28□□□□□ -1.4
NDFIP1-202ENST00000503388 LRP6O75581 1613 aa6.28□□□□□ -1.4
NDFIP1-202ENST00000503388 CHMP4AQ9BY43 222 aa6.28□□□□□ -1.4
NDFIP1-202ENST00000503388 HDGFP51858 240 aaKnown RBP6.28□□□□□ -1.4
NDFIP1-202ENST00000503388 ZNF326Q5BKZ1 582 aaKnown RBP6.28□□□□□ -1.4
NDFIP1-202ENST00000503388 ANP32BQ92688 251 aaKnown RBP6.27□□□□□ -1.41
NDFIP1-202ENST00000503388 MRS2Q9HD23 443 aa6.27□□□□□ -1.41
NDFIP1-202ENST00000503388 KIF1BO60333 1816 aa6.27□□□□□ -1.41
NDFIP1-202ENST00000503388 ADAMTS7Q9UKP4 1686 aa6.27□□□□□ -1.41
NDFIP1-202ENST00000503388 AHDC1Q5TGY3 1603 aaPredicted RBP6.27□□□□□ -1.41
NDFIP1-202ENST00000503388 USP32Q8NFA0 1604 aa6.27□□□□□ -1.41
NDFIP1-202ENST00000503388 DDX10Q13206 875 aaKnown RBP6.27□□□□□ -1.41
NDFIP1-202ENST00000503388 NWD2Q9ULI1 1742 aa6.27□□□□□ -1.41
NDFIP1-202ENST00000503388 PLCH2O75038 1416 aa6.27□□□□□ -1.41
NDFIP1-202ENST00000503388 ATP7AQ04656 1500 aa6.26□□□□□ -1.41
NDFIP1-202ENST00000503388 CPS1P31327 1500 aa6.26□□□□□ -1.41
NDFIP1-202ENST00000503388 KTN1Q86UP2 1357 aaKnown RBP6.26□□□□□ -1.41
NDFIP1-202ENST00000503388 EIF3AQ14152 1382 aaKnown RBP6.25□□□□□ -1.41
NDFIP1-202ENST00000503388 ADGRB3O60242 1522 aa6.25□□□□□ -1.41
NDFIP1-202ENST00000503388 CCDC136Q96JN2 1154 aa6.25□□□□□ -1.41
NDFIP1-202ENST00000503388 PDE3BQ13370 1112 aa6.25□□□□□ -1.41
NDFIP1-202ENST00000503388 RALBP1Q15311 655 aa6.25□□□□□ -1.41
NDFIP1-202ENST00000503388 BECN1Q14457 450 aa6.24□□□□□ -1.41
NDFIP1-202ENST00000503388 PPP4R2Q9NY27 417 aa6.24□□□□□ -1.41
NDFIP1-202ENST00000503388 PHLPP1O60346 1717 aa6.24□□□□□ -1.41
NDFIP1-202ENST00000503388 FMN2Q9NZ56 1722 aa6.24□□□□□ -1.41
NDFIP1-202ENST00000503388 ERVK-7P63135 1459 aa6.24□□□□□ -1.41
NDFIP1-202ENST00000503388 FKBP8Q14318 412 aa6.24□□□□□ -1.41
NDFIP1-202ENST00000503388 FAM208AQ9UK61 1670 aaKnown RBP6.23□□□□□ -1.41
NDFIP1-202ENST00000503388 PTPRTO14522 1441 aa6.23□□□□□ -1.41
NDFIP1-202ENST00000503388 MIA2Q96PC5 1412 aa6.23□□□□□ -1.41
NDFIP1-202ENST00000503388 PPM1GO15355 546 aaPredicted RBP6.23□□□□□ -1.41
NDFIP1-202ENST00000503388 TMF1P82094 1093 aa6.23□□□□□ -1.41
NDFIP1-202ENST00000503388 ASXL2Q76L83 1435 aa6.23□□□□□ -1.41
NDFIP1-202ENST00000503388 STAG3Q9UJ98 1225 aa6.23□□□□□ -1.41
NDFIP1-202ENST00000503388 MYOM3Q5VTT5 1437 aa6.23□□□□□ -1.41
NDFIP1-202ENST00000503388 NUDCQ9Y266 331 aa6.23□□□□□ -1.41
NDFIP1-202ENST00000503388 PRG4Q92954 1404 aaPredicted RBP6.22□□□□□ -1.41
NDFIP1-202ENST00000503388 RRBP1Q9P2E9 1410 aaKnown RBP6.22□□□□□ -1.41
NDFIP1-202ENST00000503388 EFCAB2Q5VUJ9 269 aa6.22□□□□□ -1.41
NDFIP1-202ENST00000503388 MYH16Q9H6N6 1097 aa6.22□□□□□ -1.41
NDFIP1-202ENST00000503388 KNSTRNQ9Y448 316 aa6.22□□□□□ -1.41
NDFIP1-202ENST00000503388 ITSN1Q15811 1721 aa6.22□□□□□ -1.41
NDFIP1-202ENST00000503388 RAB3GAP2Q9H2M9 1393 aa6.22□□□□□ -1.41
NDFIP1-202ENST00000503388 TRPM2O94759 1503 aa6.22□□□□□ -1.41
NDFIP1-202ENST00000503388 MIER1Q8N108 512 aa6.21□□□□□ -1.41
NDFIP1-202ENST00000503388 PTMSP20962 102 aa6.21□□□□□ -1.42
NDFIP1-202ENST00000503388 SCAPERQ9BY12 1400 aa6.21□□□□□ -1.42
NDFIP1-202ENST00000503388 CARD11Q9BXL7 1154 aa6.21□□□□□ -1.42
NDFIP1-202ENST00000503388 CALD1Q05682 793 aaKnown RBP6.2□□□□□ -1.42
NDFIP1-202ENST00000503388 ERBINQ96RT1 1412 aa6.2□□□□□ -1.42
NDFIP1-202ENST00000503388 PPP1R15AO75807 674 aaPredicted RBP6.2□□□□□ -1.42
NDFIP1-202ENST00000503388 LRP5O75197 1615 aa6.2□□□□□ -1.42
NDFIP1-202ENST00000503388 SHANK3Q9BYB0 1731 aa6.2□□□□□ -1.42
NDFIP1-202ENST00000503388 AAMPQ13685 434 aa6.2□□□□□ -1.42
NDFIP1-202ENST00000503388 MON2Q7Z3U7 1717 aa6.19□□□□□ -1.42
NDFIP1-202ENST00000503388 PARP4Q9UKK3 1724 aaKnown RBP6.19□□□□□ -1.42
NDFIP1-202ENST00000503388 RRP7BPQ9NSQ0 103 aa6.19□□□□□ -1.42
NDFIP1-202ENST00000503388 CHIC2Q9UKJ5 165 aa6.19□□□□□ -1.42
NDFIP1-202ENST00000503388 TSPOAP1O95153 1857 aa6.19□□□□□ -1.42
NDFIP1-202ENST00000503388 LRRC9Q6ZRR7 1453 aa6.19□□□□□ -1.42
NDFIP1-202ENST00000503388 PZPP20742 1482 aa6.18□□□□□ -1.42
NDFIP1-202ENST00000503388 DHX57Q6P158 1386 aaKnown RBP6.18□□□□□ -1.42
NDFIP1-202ENST00000503388 SETD1BQ9UPS6 1966 aaKnown RBP6.18□□□□□ -1.42
NDFIP1-202ENST00000503388 FAM9BQ8IZU0 186 aa6.18□□□□□ -1.42
NDFIP1-202ENST00000503388 ARHGEF28Q8N1W1 1705 aaKnown RBP6.18□□□□□ -1.42
NDFIP1-202ENST00000503388 NCOA3Q9Y6Q9 1424 aa6.18□□□□□ -1.42
NDFIP1-202ENST00000503388 ASXL1Q8IXJ9 1541 aa6.18□□□□□ -1.42
NDFIP1-202ENST00000503388 DLC1Q96QB1 1528 aa6.18□□□□□ -1.42
NDFIP1-202ENST00000503388 C9orf84Q5VXU9 1444 aa6.18□□□□□ -1.42
NDFIP1-202ENST00000503388 FGD6Q6ZV73 1430 aa6.17□□□□□ -1.42
NDFIP1-202ENST00000503388 GOLGA6L22H0YM25 854 aa6.17□□□□□ -1.42
NDFIP1-202ENST00000503388 WASHC2AQ641Q2 1341 aa6.17□□□□□ -1.42
NDFIP1-202ENST00000503388 WASHC2CQ9Y4E1 1318 aa6.17□□□□□ -1.42
NDFIP1-202ENST00000503388 SCAF11Q99590 1463 aaKnown RBP6.17□□□□□ -1.42
NDFIP1-202ENST00000503388 TROQ12816 1431 aaPredicted RBP6.17□□□□□ -1.42
NDFIP1-202ENST00000503388 FANCAO15360 1455 aa6.16□□□□□ -1.42
NDFIP1-202ENST00000503388 HDAC5Q9UQL6 1122 aa6.16□□□□□ -1.42
NDFIP1-202ENST00000503388 N4BP2Q86UW6 1770 aaPredicted RBP6.16□□□□□ -1.42
NDFIP1-202ENST00000503388 GLIPR1L2Q4G1C9 344 aa6.16□□□□□ -1.42
NDFIP1-202ENST00000503388 CASC1Q6TDU7 716 aa6.16□□□□□ -1.42
NDFIP1-202ENST00000503388 MPHOSPH9Q99550 1183 aa6.16□□□□□ -1.42
NDFIP1-202ENST00000503388 NEXMIFQ5QGS0 1516 aa6.16□□□□□ -1.42
NDFIP1-202ENST00000503388 KIF15Q9NS87 1388 aa6.15□□□□□ -1.42
NDFIP1-202ENST00000503388 HFM1A2PYH4 1435 aa6.15□□□□□ -1.42
NDFIP1-202ENST00000503388 SCAF1Q9H7N4 1312 aaKnown RBP6.15□□□□□ -1.43
NDFIP1-202ENST00000503388 HSP90AA1P07900 732 aaKnown RBP6.15□□□□□ -1.43
NDFIP1-202ENST00000503388 TNS1Q9HBL0 1735 aaKnown RBP6.14□□□□□ -1.43
NDFIP1-202ENST00000503388 PAPPAQ13219 1627 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms