RNA–Protein interactions for RNA: ENST00000503282.1

UBE2D3-214, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-214ENST00000503282 ABCF1Q8NE71 845 aaKnown RBP eCLIP32.53■■■□□ 2.8
UBE2D3-214ENST00000503282 BCANQ96GW7 911 aa32.51■■■□□ 2.79
UBE2D3-214ENST00000503282 CLTCL1P53675 1640 aa32.51■■■□□ 2.79
UBE2D3-214ENST00000503282 LTBP4Q8N2S1 1624 aa32.51■■■□□ 2.79
UBE2D3-214ENST00000503282 ZNF326Q5BKZ1 582 aaKnown RBP32.5■■■□□ 2.79
UBE2D3-214ENST00000503282 ZFYVE9O95405 1425 aa32.5■■■□□ 2.79
UBE2D3-214ENST00000503282 NUTM2DQ5VT03 806 aaPredicted RBP32.46■■■□□ 2.79
UBE2D3-214ENST00000503282 KIF1BO60333 1816 aa32.44■■■□□ 2.78
UBE2D3-214ENST00000503282 SENP3Q9H4L4 574 aaPredicted RBP32.43■■■□□ 2.78
UBE2D3-214ENST00000503282 SLC26A8Q96RN1 970 aa32.42■■■□□ 2.78
UBE2D3-214ENST00000503282 PLEKHG1Q9ULL1 1385 aa32.42■■■□□ 2.78
UBE2D3-214ENST00000503282 CCDC144AA2RUR9 1427 aa32.41■■■□□ 2.78
UBE2D3-214ENST00000503282 FBXO41Q8TF61 875 aa32.39■■■□□ 2.78
UBE2D3-214ENST00000503282 TRIM26Q12899 539 aaPredicted RBP32.37■■■□□ 2.77
UBE2D3-214ENST00000503282 CPS1P31327 1500 aa32.36■■■□□ 2.77
UBE2D3-214ENST00000503282 ILDR1Q86SU0 546 aaPredicted RBP32.36■■■□□ 2.77
UBE2D3-214ENST00000503282 IQSEC2Q5JU85 1478 aa32.32■■■□□ 2.76
UBE2D3-214ENST00000503282 RPGRIP1LQ68CZ1 1315 aa32.31■■■□□ 2.76
UBE2D3-214ENST00000503282 TBX22Q9Y458 520 aa32.3■■■□□ 2.76
UBE2D3-214ENST00000503282 NEXMIFQ5QGS0 1516 aa32.28■■■□□ 2.76
UBE2D3-214ENST00000503282 VGFO15240 615 aaPredicted RBP32.28■■■□□ 2.76
UBE2D3-214ENST00000503282 KCNA6P17658 529 aa32.28■■■□□ 2.76
UBE2D3-214ENST00000503282 RGL3Q3MIN7 710 aa32.28■■■□□ 2.76
UBE2D3-214ENST00000503282 STRCP1A6NGW2 1772 aa32.27■■■□□ 2.76
UBE2D3-214ENST00000503282 ANKRD30BQ9BXX2 1392 aa32.24■■■□□ 2.75
UBE2D3-214ENST00000503282 ADAMTS13Q76LX8 1427 aa32.24■■■□□ 2.75
UBE2D3-214ENST00000503282 SPATA31E1Q6ZUB1 1445 aa32.21■■■□□ 2.75
UBE2D3-214ENST00000503282 DIP2AQ14689 1571 aa32.2■■■□□ 2.75
UBE2D3-214ENST00000503282 LRRC7Q96NW7 1537 aa32.2■■■□□ 2.74
UBE2D3-214ENST00000503282 SETBP1Q9Y6X0 1596 aa32.17■■■□□ 2.74
UBE2D3-214ENST00000503282 UBAP1LF5GYI3 381 aa32.16■■■□□ 2.74
UBE2D3-214ENST00000503282 PROSER2Q86WR7 435 aaPredicted RBP32.16■■■□□ 2.74
UBE2D3-214ENST00000503282 PPLO60437 1756 aa32.16■■■□□ 2.74
UBE2D3-214ENST00000503282 PIK3R4Q99570 1358 aa32.16■■■□□ 2.74
UBE2D3-214ENST00000503282 CHD2O14647 1828 aaKnown RBP32.14■■■□□ 2.74
UBE2D3-214ENST00000503282 NRXN3Q9Y4C0 1643 aa32.13■■■□□ 2.73
UBE2D3-214ENST00000503282 NWD1Q149M9 1564 aa32.12■■■□□ 2.73
UBE2D3-214ENST00000503282 NKTRP30414 1462 aaKnown RBP32.1■■■□□ 2.73
UBE2D3-214ENST00000503282 TOM1O60784 492 aa32.1■■■□□ 2.73
UBE2D3-214ENST00000503282 AMOTL2Q9Y2J4 779 aa32.09■■■□□ 2.73
UBE2D3-214ENST00000503282 ADGRF5Q8IZF2 1346 aa32.08■■■□□ 2.73
UBE2D3-214ENST00000503282 TMEM94Q12767 1356 aa32.07■■■□□ 2.73
UBE2D3-214ENST00000503282 RBM33Q96EV2 1170 aaKnown RBP32.07■■■□□ 2.72
UBE2D3-214ENST00000503282 METP08581 1390 aa32.07■■■□□ 2.72
UBE2D3-214ENST00000503282 IFT172Q9UG01 1749 aa32.05■■■□□ 2.72
UBE2D3-214ENST00000503282 PTPRUQ92729 1446 aa32.03■■■□□ 2.72
UBE2D3-214ENST00000503282 ALKQ9UM73 1620 aa32.02■■■□□ 2.72
UBE2D3-214ENST00000503282 XIRP1Q702N8 1843 aaKnown RBP32.02■■■□□ 2.72
UBE2D3-214ENST00000503282 SCAF1Q9H7N4 1312 aaKnown RBP32■■■□□ 2.71
UBE2D3-214ENST00000503282 PIP4K2BP78356 416 aa31.99■■■□□ 2.71
UBE2D3-214ENST00000503282 C14orf37Q86TY3 774 aa31.97■■■□□ 2.71
UBE2D3-214ENST00000503282 DCAF11Q8TEB1 546 aa31.97■■■□□ 2.71
UBE2D3-214ENST00000503282 KDM2AQ9Y2K7 1162 aa31.96■■■□□ 2.71
UBE2D3-214ENST00000503282 MSH6P52701 1360 aa31.94■■■□□ 2.7
UBE2D3-214ENST00000503282 PIK3C2GO75747 1445 aa31.94■■■□□ 2.7
UBE2D3-214ENST00000503282 NCOA3Q9Y6Q9 1424 aa31.94■■■□□ 2.7
UBE2D3-214ENST00000503282 STAC3Q96MF2 364 aa31.94■■■□□ 2.7
UBE2D3-214ENST00000503282 MYOM2P54296 1465 aa31.94■■■□□ 2.7
UBE2D3-214ENST00000503282 SETD1AO15047 1707 aaKnown RBP31.94■■■□□ 2.7
UBE2D3-214ENST00000503282 XRN1Q8IZH2 1706 aaKnown RBP31.93■■■□□ 2.7
UBE2D3-214ENST00000503282 DHX57Q6P158 1386 aaKnown RBP31.93■■■□□ 2.7
UBE2D3-214ENST00000503282 C14orf93Q9H972 538 aaKnown RBP31.89■■■□□ 2.7
UBE2D3-214ENST00000503282 NRXN1Q9ULB1 1477 aa31.89■■■□□ 2.7
UBE2D3-214ENST00000503282 PCGF6Q9BYE7 350 aa31.87■■■□□ 2.69
UBE2D3-214ENST00000503282 C19orf44Q9H6X5 657 aa31.87■■■□□ 2.69
UBE2D3-214ENST00000503282 CFAP70Q5T0N1 1121 aa31.86■■■□□ 2.69
UBE2D3-214ENST00000503282 TMEM132EQ6IEE7 984 aa31.86■■■□□ 2.69
UBE2D3-214ENST00000503282 SIN3AQ96ST3 1273 aa31.85■■■□□ 2.69
UBE2D3-214ENST00000503282 STK26Q9P289 416 aa31.84■■■□□ 2.69
UBE2D3-214ENST00000503282 NEUROD1Q13562 356 aa31.83■■■□□ 2.69
UBE2D3-214ENST00000503282 ATF3P18847 181 aa31.82■■■□□ 2.68
UBE2D3-214ENST00000503282 PTCH1Q13635 1447 aa31.81■■■□□ 2.68
UBE2D3-214ENST00000503282 CADPS2Q86UW7 1296 aa31.8■■■□□ 2.68
UBE2D3-214ENST00000503282 ROBO2Q9HCK4 1378 aa31.8■■■□□ 2.68
UBE2D3-214ENST00000503282 LAMC1P11047 1609 aa31.79■■■□□ 2.68
UBE2D3-214ENST00000503282 SLAIN2Q9P270 581 aa31.79■■■□□ 2.68
UBE2D3-214ENST00000503282 LRPPRCP42704 1394 aaKnown RBP31.79■■■□□ 2.68
UBE2D3-214ENST00000503282 PRAG1Q86YV5 1406 aa31.78■■■□□ 2.68
UBE2D3-214ENST00000503282 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.77■■■□□ 2.68
UBE2D3-214ENST00000503282 ABCC11Q96J66 1382 aa31.76■■■□□ 2.67
UBE2D3-214ENST00000503282 YTHDC2Q9H6S0 1430 aaKnown RBP31.75■■■□□ 2.67
UBE2D3-214ENST00000503282 ASXL1Q8IXJ9 1541 aa31.75■■■□□ 2.67
UBE2D3-214ENST00000503282 HSPA1LP34931 641 aa31.74■■■□□ 2.67
UBE2D3-214ENST00000503282 FAM135BQ49AJ0 1406 aa31.73■■■□□ 2.67
UBE2D3-214ENST00000503282 L3MBTL2Q969R5 705 aa31.72■■■□□ 2.67
UBE2D3-214ENST00000503282 TECPR2O15040 1411 aa31.72■■■□□ 2.67
UBE2D3-214ENST00000503282 ADGRL3Q9HAR2 1447 aa31.72■■■□□ 2.67
UBE2D3-214ENST00000503282 DCCP43146 1447 aa31.71■■■□□ 2.67
UBE2D3-214ENST00000503282 WAPLQ7Z5K2 1190 aa31.69■■■□□ 2.66
UBE2D3-214ENST00000503282 SIRT1Q96EB6 747 aa31.68■■■□□ 2.66
UBE2D3-214ENST00000503282 KNDC1Q76NI1 1749 aa31.66■■■□□ 2.66
UBE2D3-214ENST00000503282 NALCNQ8IZF0 1738 aa31.66■■■□□ 2.66
UBE2D3-214ENST00000503282 ROBO1Q9Y6N7 1651 aa31.64■■■□□ 2.66
UBE2D3-214ENST00000503282 ADGRB1O14514 1584 aa31.64■■■□□ 2.65
UBE2D3-214ENST00000503282 TRAK1Q9UPV9 953 aa31.62■■■□□ 2.65
UBE2D3-214ENST00000503282 PLEKHH1Q9ULM0 1364 aa31.6■■■□□ 2.65
UBE2D3-214ENST00000503282 POGKQ9P215 609 aa31.6■■■□□ 2.65
UBE2D3-214ENST00000503282 PRAM1Q96QH2 718 aa31.59■■■□□ 2.65
UBE2D3-214ENST00000503282 MST1RQ04912 1400 aa31.58■■■□□ 2.65
UBE2D3-214ENST00000503282 TONSLQ96HA7 1378 aa31.56■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms