RNA–Protein interactions for RNA: ENST00000500197.6

LINC00461-201, long intergenic non-protein coding RNA 461, humanhuman

TSL 1 (best) BASIC

Gene LINC00461, Length 3,381 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00461-201ENST00000500197 CCDC184Q52MB2 194 aa13.51□□□□□ -0.25
LINC00461-201ENST00000500197 SLC24A1O60721 1099 aa13.51□□□□□ -0.25
LINC00461-201ENST00000500197 AGLP35573 1532 aa13.5□□□□□ -0.25
LINC00461-201ENST00000500197 DISP3Q9P2K9 1392 aa13.5□□□□□ -0.25
LINC00461-201ENST00000500197 ZFYVE9O95405 1425 aa13.5□□□□□ -0.25
LINC00461-201ENST00000500197 AFAP1Q8N556 730 aa13.5□□□□□ -0.25
LINC00461-201ENST00000500197 DIP2BQ9P265 1576 aa13.5□□□□□ -0.25
LINC00461-201ENST00000500197 PNISRQ8TF01 805 aaKnown RBP13.49□□□□□ -0.25
LINC00461-201ENST00000500197 UGGT1Q9NYU2 1555 aa13.49□□□□□ -0.25
LINC00461-201ENST00000500197 PIK3C2GO75747 1445 aa13.49□□□□□ -0.25
LINC00461-201ENST00000500197 EIF3AQ14152 1382 aaKnown RBP13.48□□□□□ -0.25
LINC00461-201ENST00000500197 NPATQ14207 1427 aa13.48□□□□□ -0.25
LINC00461-201ENST00000500197 NEXMIFQ5QGS0 1516 aa13.48□□□□□ -0.25
LINC00461-201ENST00000500197 PREX1Q8TCU6 1659 aa13.47□□□□□ -0.25
LINC00461-201ENST00000500197 MRS2Q9HD23 443 aa13.47□□□□□ -0.25
LINC00461-201ENST00000500197 CLTCQ00610 1675 aaKnown RBP13.46□□□□□ -0.25
LINC00461-201ENST00000500197 ARHGEF28Q8N1W1 1705 aaKnown RBP13.46□□□□□ -0.25
LINC00461-201ENST00000500197 QRICH2Q9H0J4 1663 aa13.46□□□□□ -0.25
LINC00461-201ENST00000500197 ASXL1Q8IXJ9 1541 aa13.46□□□□□ -0.26
LINC00461-201ENST00000500197 HNRNPUQ00839 825 aaKnown RBP eCLIP13.46□□□□□ -0.26
LINC00461-201ENST00000500197 RIMBP3CA6NJZ7 1639 aa13.45□□□□□ -0.26
LINC00461-201ENST00000500197 RIMBP3BA6NNM3 1639 aa13.45□□□□□ -0.26
LINC00461-201ENST00000500197 RIMBP3Q9UFD9 1639 aa13.45□□□□□ -0.26
LINC00461-201ENST00000500197 RPGRIP1LQ68CZ1 1315 aa13.45□□□□□ -0.26
LINC00461-201ENST00000500197 ERVK-7P63135 1459 aa13.45□□□□□ -0.26
LINC00461-201ENST00000500197 NBPF1Q3BBV0 1214 aa13.45□□□□□ -0.26
LINC00461-201ENST00000500197 TMEM131LA2VDJ0 1609 aa13.44□□□□□ -0.26
LINC00461-201ENST00000500197 TMF1P82094 1093 aa13.43□□□□□ -0.26
LINC00461-201ENST00000500197 NEFLP07196 543 aa13.42□□□□□ -0.26
LINC00461-201ENST00000500197 NLRP13Q86W25 1043 aa13.42□□□□□ -0.26
LINC00461-201ENST00000500197 PUS7Q96PZ0 661 aaKnown RBP13.42□□□□□ -0.26
LINC00461-201ENST00000500197 CDCA8Q53HL2 280 aa13.41□□□□□ -0.26
LINC00461-201ENST00000500197 FKBP8Q14318 412 aa13.41□□□□□ -0.26
LINC00461-201ENST00000500197 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.39□□□□□ -0.27
LINC00461-201ENST00000500197 KDM2AQ9Y2K7 1162 aa13.39□□□□□ -0.27
LINC00461-201ENST00000500197 SETD1AO15047 1707 aaKnown RBP13.39□□□□□ -0.27
LINC00461-201ENST00000500197 ANKRD26Q9UPS8 1709 aa13.38□□□□□ -0.27
LINC00461-201ENST00000500197 PDE3BQ13370 1112 aa13.38□□□□□ -0.27
LINC00461-201ENST00000500197 TSHZ2Q9NRE2 1034 aa13.38□□□□□ -0.27
LINC00461-201ENST00000500197 NUDCQ9Y266 331 aa13.38□□□□□ -0.27
LINC00461-201ENST00000500197 SPATA31D1Q6ZQQ2 1576 aa13.37□□□□□ -0.27
LINC00461-201ENST00000500197 NPM1P06748 294 aaKnown RBP eCLIP13.37□□□□□ -0.27
LINC00461-201ENST00000500197 ZNF326Q5BKZ1 582 aaKnown RBP13.37□□□□□ -0.27
LINC00461-201ENST00000500197 KIF3BO15066 747 aa13.37□□□□□ -0.27
LINC00461-201ENST00000500197 SHPRHQ149N8 1683 aa13.36□□□□□ -0.27
LINC00461-201ENST00000500197 ARHGEF40Q8TER5 1519 aa13.35□□□□□ -0.27
LINC00461-201ENST00000500197 KIF13AQ9H1H9 1805 aa13.35□□□□□ -0.27
LINC00461-201ENST00000500197 MYO5BQ9ULV0 1848 aa13.35□□□□□ -0.27
LINC00461-201ENST00000500197 PPP6R1Q9UPN7 881 aa13.35□□□□□ -0.27
LINC00461-201ENST00000500197 PPP4R2Q9NY27 417 aa13.34□□□□□ -0.27
LINC00461-201ENST00000500197 DLC1Q96QB1 1528 aa13.34□□□□□ -0.27
LINC00461-201ENST00000500197 KNDC1Q76NI1 1749 aa13.33□□□□□ -0.28
LINC00461-201ENST00000500197 AMER1Q5JTC6 1135 aaPredicted RBP13.33□□□□□ -0.28
LINC00461-201ENST00000500197 RGL3Q3MIN7 710 aa13.32□□□□□ -0.28
LINC00461-201ENST00000500197 C14orf93Q9H972 538 aaKnown RBP13.32□□□□□ -0.28
LINC00461-201ENST00000500197 FAM9BQ8IZU0 186 aa13.31□□□□□ -0.28
LINC00461-201ENST00000500197 TULP4Q9NRJ4 1543 aa13.3□□□□□ -0.28
LINC00461-201ENST00000500197 TMC1Q8TDI8 760 aa13.3□□□□□ -0.28
LINC00461-201ENST00000500197 NINLQ9Y2I6 1382 aa13.3□□□□□ -0.28
LINC00461-201ENST00000500197 MED14O60244 1454 aa13.3□□□□□ -0.28
LINC00461-201ENST00000500197 NCBP3Q53F19 620 aaKnown RBP13.29□□□□□ -0.28
LINC00461-201ENST00000500197 ADGRF5Q8IZF2 1346 aa13.29□□□□□ -0.28
LINC00461-201ENST00000500197 PANK3Q9H999 370 aa13.29□□□□□ -0.28
LINC00461-201ENST00000500197 YEATS2Q9ULM3 1422 aa13.28□□□□□ -0.28
LINC00461-201ENST00000500197 ZNF521Q96K83 1311 aa13.28□□□□□ -0.28
LINC00461-201ENST00000500197 NGEFQ8N5V2 710 aa13.28□□□□□ -0.28
LINC00461-201ENST00000500197 NSD2O96028 1365 aa13.27□□□□□ -0.29
LINC00461-201ENST00000500197 PTPRMP28827 1452 aa13.26□□□□□ -0.29
LINC00461-201ENST00000500197 POLR3AO14802 1390 aaPredicted RBP13.26□□□□□ -0.29
LINC00461-201ENST00000500197 SLC52A1Q9NWF4 448 aa13.26□□□□□ -0.29
LINC00461-201ENST00000500197 ADGRB2O60241 1585 aa13.25□□□□□ -0.29
LINC00461-201ENST00000500197 NRXN3Q9Y4C0 1643 aa13.25□□□□□ -0.29
LINC00461-201ENST00000500197 IQSEC2Q5JU85 1478 aa13.25□□□□□ -0.29
LINC00461-201ENST00000500197 ALKQ9UM73 1620 aa13.23□□□□□ -0.29
LINC00461-201ENST00000500197 PPP2R1AP30153 589 aa13.23□□□□□ -0.29
LINC00461-201ENST00000500197 CDC42BPGQ6DT37 1551 aa13.23□□□□□ -0.29
LINC00461-201ENST00000500197 MYT1Q01538 1121 aa13.23□□□□□ -0.29
LINC00461-201ENST00000500197 KIF20BQ96Q89 1820 aa13.22□□□□□ -0.29
LINC00461-201ENST00000500197 CENPJQ9HC77 1338 aaPredicted RBP13.21□□□□□ -0.29
LINC00461-201ENST00000500197 CFAP70Q5T0N1 1121 aa13.21□□□□□ -0.29
LINC00461-201ENST00000500197 TRMT2AQ8IZ69 625 aaKnown RBP13.2□□□□□ -0.3
LINC00461-201ENST00000500197 FANCIQ9NVI1 1328 aa13.2□□□□□ -0.3
LINC00461-201ENST00000500197 KNSTRNQ9Y448 316 aa13.19□□□□□ -0.3
LINC00461-201ENST00000500197 ANKRD36BQ8N2N9 1353 aa13.19□□□□□ -0.3
LINC00461-201ENST00000500197 VGFO15240 615 aaPredicted RBP13.18□□□□□ -0.3
LINC00461-201ENST00000500197 A2ML1A8K2U0 1454 aa13.18□□□□□ -0.3
LINC00461-201ENST00000500197 NLRP1Q9C000 1473 aa13.18□□□□□ -0.3
LINC00461-201ENST00000500197 CPS1P31327 1500 aa13.18□□□□□ -0.3
LINC00461-201ENST00000500197 CFAP65Q6ZU64 1925 aaKnown RBP13.18□□□□□ -0.3
LINC00461-201ENST00000500197 CD163L1Q9NR16 1453 aa13.16□□□□□ -0.3
LINC00461-201ENST00000500197 TECPR2O15040 1411 aa13.16□□□□□ -0.3
LINC00461-201ENST00000500197 RRP1P56182 461 aaKnown RBP13.16□□□□□ -0.3
LINC00461-201ENST00000500197 COL3A1P02461 1466 aaPredicted RBP13.16□□□□□ -0.3
LINC00461-201ENST00000500197 UBR1Q8IWV7 1749 aa13.16□□□□□ -0.3
LINC00461-201ENST00000500197 CARD14Q9BXL6 1004 aa13.15□□□□□ -0.3
LINC00461-201ENST00000500197 RIMS1Q86UR5 1692 aaKnown RBP13.15□□□□□ -0.3
LINC00461-201ENST00000500197 MON2Q7Z3U7 1717 aa13.15□□□□□ -0.3
LINC00461-201ENST00000500197 AKAP12Q02952 1782 aa13.14□□□□□ -0.31
LINC00461-201ENST00000500197 ABCC11Q96J66 1382 aa13.14□□□□□ -0.31
LINC00461-201ENST00000500197 RAPGEF3O95398 923 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms