RNA–Protein interactions for RNA: ENST00000498658.5

FXR1-222, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 683 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-222ENST00000498658 SPHKAPQ2M3C7 1700 aa15.68■□□□□ 0.1
FXR1-222ENST00000498658 CPS1P31327 1500 aa15.68■□□□□ 0.1
FXR1-222ENST00000498658 CHGAP10645 457 aaKnown RBP15.67■□□□□ 0.1
FXR1-222ENST00000498658 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.67■□□□□ 0.1
FXR1-222ENST00000498658 TMEM131LA2VDJ0 1609 aa15.67■□□□□ 0.1
FXR1-222ENST00000498658 SETD5Q9C0A6 1442 aa15.66■□□□□ 0.1
FXR1-222ENST00000498658 PPP1R15AO75807 674 aaPredicted RBP15.65■□□□□ 0.1
FXR1-222ENST00000498658 TRPM2O94759 1503 aa15.63■□□□□ 0.09
FXR1-222ENST00000498658 ZFYVE9O95405 1425 aa15.63■□□□□ 0.09
FXR1-222ENST00000498658 RIMS2Q9UQ26 1411 aa15.63■□□□□ 0.09
FXR1-222ENST00000498658 BCANQ96GW7 911 aa15.63■□□□□ 0.09
FXR1-222ENST00000498658 MYO5BQ9ULV0 1848 aa15.62■□□□□ 0.09
FXR1-222ENST00000498658 MPHOSPH9Q99550 1183 aa15.61■□□□□ 0.09
FXR1-222ENST00000498658 PLEKHG1Q9ULL1 1385 aa15.61■□□□□ 0.09
FXR1-222ENST00000498658 HRCP23327 699 aa15.59■□□□□ 0.09
FXR1-222ENST00000498658 NCBP3Q53F19 620 aaKnown RBP15.59■□□□□ 0.09
FXR1-222ENST00000498658 ZNF326Q5BKZ1 582 aaKnown RBP15.59■□□□□ 0.09
FXR1-222ENST00000498658 KIF1BO60333 1816 aa15.58■□□□□ 0.08
FXR1-222ENST00000498658 RAB3GAP2Q9H2M9 1393 aa15.58■□□□□ 0.08
FXR1-222ENST00000498658 CLTCL1P53675 1640 aa15.57■□□□□ 0.08
FXR1-222ENST00000498658 SLC26A8Q96RN1 970 aa15.57■□□□□ 0.08
FXR1-222ENST00000498658 KCNA6P17658 529 aa15.56■□□□□ 0.08
FXR1-222ENST00000498658 TBX22Q9Y458 520 aa15.56■□□□□ 0.08
FXR1-222ENST00000498658 UBAP1LF5GYI3 381 aa15.55■□□□□ 0.08
FXR1-222ENST00000498658 TOM1O60784 492 aa15.55■□□□□ 0.08
FXR1-222ENST00000498658 CCDC144AA2RUR9 1427 aa15.54■□□□□ 0.08
FXR1-222ENST00000498658 RPGRIP1LQ68CZ1 1315 aa15.54■□□□□ 0.08
FXR1-222ENST00000498658 DIP2AQ14689 1571 aa15.53■□□□□ 0.08
FXR1-222ENST00000498658 LRRC7Q96NW7 1537 aa15.53■□□□□ 0.08
FXR1-222ENST00000498658 KCNA4P22459 653 aa15.53■□□□□ 0.08
FXR1-222ENST00000498658 STRCP1A6NGW2 1772 aa15.53■□□□□ 0.08
FXR1-222ENST00000498658 PIK3R4Q99570 1358 aa15.52■□□□□ 0.08
FXR1-222ENST00000498658 VGFO15240 615 aaPredicted RBP15.52■□□□□ 0.08
FXR1-222ENST00000498658 NUTM2DQ5VT03 806 aaPredicted RBP15.52■□□□□ 0.08
FXR1-222ENST00000498658 NKTRP30414 1462 aaKnown RBP15.51■□□□□ 0.07
FXR1-222ENST00000498658 ADAMTS13Q76LX8 1427 aa15.5■□□□□ 0.07
FXR1-222ENST00000498658 NWD1Q149M9 1564 aa15.49■□□□□ 0.07
FXR1-222ENST00000498658 NEXMIFQ5QGS0 1516 aa15.49■□□□□ 0.07
FXR1-222ENST00000498658 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
FXR1-222ENST00000498658 SETBP1Q9Y6X0 1596 aa15.49■□□□□ 0.07
FXR1-222ENST00000498658 CHD2O14647 1828 aaKnown RBP15.48■□□□□ 0.07
FXR1-222ENST00000498658 PROSER2Q86WR7 435 aaPredicted RBP15.48■□□□□ 0.07
FXR1-222ENST00000498658 TMEM94Q12767 1356 aa15.46■□□□□ 0.07
FXR1-222ENST00000498658 MAPK8IP2Q13387 824 aaPredicted RBP15.45■□□□□ 0.06
FXR1-222ENST00000498658 ANKRD30BQ9BXX2 1392 aa15.45■□□□□ 0.06
FXR1-222ENST00000498658 SPATA31E1Q6ZUB1 1445 aa15.44■□□□□ 0.06
FXR1-222ENST00000498658 NCOA3Q9Y6Q9 1424 aa15.44■□□□□ 0.06
FXR1-222ENST00000498658 NRXN3Q9Y4C0 1643 aa15.43■□□□□ 0.06
FXR1-222ENST00000498658 PIP4K2BP78356 416 aa15.43■□□□□ 0.06
FXR1-222ENST00000498658 AMOTL2Q9Y2J4 779 aa15.43■□□□□ 0.06
FXR1-222ENST00000498658 PPLO60437 1756 aa15.43■□□□□ 0.06
FXR1-222ENST00000498658 MSH6P52701 1360 aa15.42■□□□□ 0.06
FXR1-222ENST00000498658 RGL3Q3MIN7 710 aa15.42■□□□□ 0.06
FXR1-222ENST00000498658 XIRP1Q702N8 1843 aaKnown RBP15.42■□□□□ 0.06
FXR1-222ENST00000498658 C14orf37Q86TY3 774 aa15.39■□□□□ 0.05
FXR1-222ENST00000498658 METP08581 1390 aa15.38■□□□□ 0.05
FXR1-222ENST00000498658 PTPRUQ92729 1446 aa15.37■□□□□ 0.05
FXR1-222ENST00000498658 RBM33Q96EV2 1170 aaKnown RBP15.37■□□□□ 0.05
FXR1-222ENST00000498658 STAC3Q96MF2 364 aa15.37■□□□□ 0.05
FXR1-222ENST00000498658 C19orf44Q9H6X5 657 aa15.37■□□□□ 0.05
FXR1-222ENST00000498658 XRN1Q8IZH2 1706 aaKnown RBP15.37■□□□□ 0.05
FXR1-222ENST00000498658 IFT172Q9UG01 1749 aa15.37■□□□□ 0.05
FXR1-222ENST00000498658 ALKQ9UM73 1620 aa15.36■□□□□ 0.05
FXR1-222ENST00000498658 TRIM26Q12899 539 aaPredicted RBP15.35■□□□□ 0.05
FXR1-222ENST00000498658 CADPS2Q86UW7 1296 aa15.35■□□□□ 0.05
FXR1-222ENST00000498658 ADGRF5Q8IZF2 1346 aa15.35■□□□□ 0.05
FXR1-222ENST00000498658 FAM135BQ49AJ0 1406 aa15.34■□□□□ 0.05
FXR1-222ENST00000498658 ATF3P18847 181 aa15.34■□□□□ 0.05
FXR1-222ENST00000498658 MYOM2P54296 1465 aa15.33■□□□□ 0.05
FXR1-222ENST00000498658 HSPA1LP34931 641 aa15.33■□□□□ 0.04
FXR1-222ENST00000498658 SLAIN2Q9P270 581 aa15.33■□□□□ 0.04
FXR1-222ENST00000498658 SETD1AO15047 1707 aaKnown RBP15.33■□□□□ 0.04
FXR1-222ENST00000498658 PIK3C2GO75747 1445 aa15.33■□□□□ 0.04
FXR1-222ENST00000498658 PTCH1Q13635 1447 aa15.33■□□□□ 0.04
FXR1-222ENST00000498658 PRAG1Q86YV5 1406 aa15.33■□□□□ 0.04
FXR1-222ENST00000498658 DCCP43146 1447 aa15.32■□□□□ 0.04
FXR1-222ENST00000498658 C14orf93Q9H972 538 aaKnown RBP15.3■□□□□ 0.04
FXR1-222ENST00000498658 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.3■□□□□ 0.04
FXR1-222ENST00000498658 NRXN1Q9ULB1 1477 aa15.3■□□□□ 0.04
FXR1-222ENST00000498658 LAMC1P11047 1609 aa15.29■□□□□ 0.04
FXR1-222ENST00000498658 DCAF11Q8TEB1 546 aa15.28■□□□□ 0.04
FXR1-222ENST00000498658 ADGRL3Q9HAR2 1447 aa15.27■□□□□ 0.04
FXR1-222ENST00000498658 LRPPRCP42704 1394 aaKnown RBP15.27■□□□□ 0.04
FXR1-222ENST00000498658 ABCC11Q96J66 1382 aa15.27■□□□□ 0.04
FXR1-222ENST00000498658 ROBO1Q9Y6N7 1651 aa15.27■□□□□ 0.03
FXR1-222ENST00000498658 TECPR2O15040 1411 aa15.26■□□□□ 0.03
FXR1-222ENST00000498658 DHX57Q6P158 1386 aaKnown RBP15.26■□□□□ 0.03
FXR1-222ENST00000498658 ROBO2Q9HCK4 1378 aa15.26■□□□□ 0.03
FXR1-222ENST00000498658 NPM3O75607 178 aaKnown RBP15.25■□□□□ 0.03
FXR1-222ENST00000498658 SIRT1Q96EB6 747 aa15.25■□□□□ 0.03
FXR1-222ENST00000498658 CFAP70Q5T0N1 1121 aa15.24■□□□□ 0.03
FXR1-222ENST00000498658 TMEM132EQ6IEE7 984 aa15.24■□□□□ 0.03
FXR1-222ENST00000498658 STK26Q9P289 416 aa15.24■□□□□ 0.03
FXR1-222ENST00000498658 KDM2AQ9Y2K7 1162 aa15.24■□□□□ 0.03
FXR1-222ENST00000498658 YTHDC2Q9H6S0 1430 aaKnown RBP15.24■□□□□ 0.03
FXR1-222ENST00000498658 KNDC1Q76NI1 1749 aa15.23■□□□□ 0.03
FXR1-222ENST00000498658 NALCNQ8IZF0 1738 aa15.22■□□□□ 0.03
FXR1-222ENST00000498658 ASXL1Q8IXJ9 1541 aa15.21■□□□□ 0.03
FXR1-222ENST00000498658 MST1RQ04912 1400 aa15.2■□□□□ 0.02
FXR1-222ENST00000498658 DISP3Q9P2K9 1392 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms