RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 ZFYVE9O95405 1425 aa22.96■■□□□ 1.27
NUP50-219ENST00000497960 SLC4A1APQ9BWU0 796 aaKnown RBP22.94■■□□□ 1.26
NUP50-219ENST00000497960 MYO5BQ9ULV0 1848 aa22.94■■□□□ 1.26
NUP50-219ENST00000497960 PLEKHG1Q9ULL1 1385 aa22.93■■□□□ 1.26
NUP50-219ENST00000497960 LRRC7Q96NW7 1537 aa22.92■■□□□ 1.26
NUP50-219ENST00000497960 KCNA6P17658 529 aa22.92■■□□□ 1.26
NUP50-219ENST00000497960 SENP3Q9H4L4 574 aaPredicted RBP22.92■■□□□ 1.26
NUP50-219ENST00000497960 STRCP1A6NGW2 1772 aa22.91■■□□□ 1.26
NUP50-219ENST00000497960 SPHKAPQ2M3C7 1700 aa22.91■■□□□ 1.26
NUP50-219ENST00000497960 SCAF1Q9H7N4 1312 aaKnown RBP22.9■■□□□ 1.26
NUP50-219ENST00000497960 NUTM2DQ5VT03 806 aaPredicted RBP22.9■■□□□ 1.26
NUP50-219ENST00000497960 PIP4K2BP78356 416 aa22.89■■□□□ 1.25
NUP50-219ENST00000497960 ZNF326Q5BKZ1 582 aaKnown RBP22.88■■□□□ 1.25
NUP50-219ENST00000497960 TBX22Q9Y458 520 aa22.86■■□□□ 1.25
NUP50-219ENST00000497960 TRPM2O94759 1503 aa22.86■■□□□ 1.25
NUP50-219ENST00000497960 ACIN1Q9UKV3 1341 aaKnown RBP22.84■■□□□ 1.25
NUP50-219ENST00000497960 PROSER2Q86WR7 435 aaPredicted RBP22.84■■□□□ 1.25
NUP50-219ENST00000497960 TMEM94Q12767 1356 aa22.81■■□□□ 1.24
NUP50-219ENST00000497960 CLTCL1P53675 1640 aa22.81■■□□□ 1.24
NUP50-219ENST00000497960 MPHOSPH9Q99550 1183 aa22.8■■□□□ 1.24
NUP50-219ENST00000497960 SETD5Q9C0A6 1442 aa22.8■■□□□ 1.24
NUP50-219ENST00000497960 NKTRP30414 1462 aaKnown RBP22.79■■□□□ 1.24
NUP50-219ENST00000497960 ADAMTS13Q76LX8 1427 aa22.79■■□□□ 1.24
NUP50-219ENST00000497960 FOXD1Q16676 465 aa22.78■■□□□ 1.24
NUP50-219ENST00000497960 NWD1Q149M9 1564 aa22.77■■□□□ 1.24
NUP50-219ENST00000497960 PIK3R4Q99570 1358 aa22.76■■□□□ 1.23
NUP50-219ENST00000497960 DIP2AQ14689 1571 aa22.76■■□□□ 1.23
NUP50-219ENST00000497960 HSPA1LP34931 641 aa22.76■■□□□ 1.23
NUP50-219ENST00000497960 RBM33Q96EV2 1170 aaKnown RBP22.76■■□□□ 1.23
NUP50-219ENST00000497960 KIF1BO60333 1816 aa22.75■■□□□ 1.23
NUP50-219ENST00000497960 ALKQ9UM73 1620 aa22.75■■□□□ 1.23
NUP50-219ENST00000497960 CHD2O14647 1828 aaKnown RBP22.73■■□□□ 1.23
NUP50-219ENST00000497960 XIRP1Q702N8 1843 aaKnown RBP22.73■■□□□ 1.23
NUP50-219ENST00000497960 RPGRIP1LQ68CZ1 1315 aa22.72■■□□□ 1.23
NUP50-219ENST00000497960 VGFO15240 615 aaPredicted RBP22.71■■□□□ 1.23
NUP50-219ENST00000497960 MSH6P52701 1360 aa22.71■■□□□ 1.23
NUP50-219ENST00000497960 RAB3GAP2Q9H2M9 1393 aa22.71■■□□□ 1.23
NUP50-219ENST00000497960 CCDC144AA2RUR9 1427 aa22.71■■□□□ 1.23
NUP50-219ENST00000497960 NEXMIFQ5QGS0 1516 aa22.71■■□□□ 1.23
NUP50-219ENST00000497960 AMOTL2Q9Y2J4 779 aa22.7■■□□□ 1.22
NUP50-219ENST00000497960 SETBP1Q9Y6X0 1596 aa22.69■■□□□ 1.22
NUP50-219ENST00000497960 C14orf37Q86TY3 774 aa22.69■■□□□ 1.22
NUP50-219ENST00000497960 NCOA3Q9Y6Q9 1424 aa22.67■■□□□ 1.22
NUP50-219ENST00000497960 DISP3Q9P2K9 1392 aa22.67■■□□□ 1.22
NUP50-219ENST00000497960 NRXN3Q9Y4C0 1643 aa22.65■■□□□ 1.22
NUP50-219ENST00000497960 PTPRUQ92729 1446 aa22.65■■□□□ 1.22
NUP50-219ENST00000497960 FAM135BQ49AJ0 1406 aa22.64■■□□□ 1.21
NUP50-219ENST00000497960 METP08581 1390 aa22.63■■□□□ 1.21
NUP50-219ENST00000497960 RGL3Q3MIN7 710 aa22.63■■□□□ 1.21
NUP50-219ENST00000497960 HRCP23327 699 aa22.61■■□□□ 1.21
NUP50-219ENST00000497960 C19orf44Q9H6X5 657 aa22.61■■□□□ 1.21
NUP50-219ENST00000497960 SLAIN2Q9P270 581 aa22.61■■□□□ 1.21
NUP50-219ENST00000497960 ATF3P18847 181 aa22.59■■□□□ 1.21
NUP50-219ENST00000497960 CADPS2Q86UW7 1296 aa22.59■■□□□ 1.21
NUP50-219ENST00000497960 SPATA31E1Q6ZUB1 1445 aa22.58■■□□□ 1.21
NUP50-219ENST00000497960 ANKRD30BQ9BXX2 1392 aa22.57■■□□□ 1.2
NUP50-219ENST00000497960 PPLO60437 1756 aa22.56■■□□□ 1.2
NUP50-219ENST00000497960 XRN1Q8IZH2 1706 aaKnown RBP22.56■■□□□ 1.2
NUP50-219ENST00000497960 ADGRF5Q8IZF2 1346 aa22.54■■□□□ 1.2
NUP50-219ENST00000497960 ROBO1Q9Y6N7 1651 aa22.52■■□□□ 1.2
NUP50-219ENST00000497960 TRIM26Q12899 539 aaPredicted RBP22.51■■□□□ 1.19
NUP50-219ENST00000497960 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.51■■□□□ 1.19
NUP50-219ENST00000497960 DCCP43146 1447 aa22.49■■□□□ 1.19
NUP50-219ENST00000497960 PTCH1Q13635 1447 aa22.48■■□□□ 1.19
NUP50-219ENST00000497960 SETD1AO15047 1707 aaKnown RBP22.47■■□□□ 1.19
NUP50-219ENST00000497960 MED1Q15648 1581 aaPredicted RBP22.46■■□□□ 1.19
NUP50-219ENST00000497960 ADGRL3Q9HAR2 1447 aa22.46■■□□□ 1.19
NUP50-219ENST00000497960 ROBO2Q9HCK4 1378 aa22.45■■□□□ 1.18
NUP50-219ENST00000497960 PHF23Q9BUL5 403 aaPredicted RBP22.44■■□□□ 1.18
NUP50-219ENST00000497960 IFT172Q9UG01 1749 aa22.44■■□□□ 1.18
NUP50-219ENST00000497960 PIK3C2GO75747 1445 aa22.43■■□□□ 1.18
NUP50-219ENST00000497960 PRAG1Q86YV5 1406 aa22.43■■□□□ 1.18
NUP50-219ENST00000497960 ILDR2Q71H61 639 aa22.43■■□□□ 1.18
NUP50-219ENST00000497960 STK26Q9P289 416 aa22.42■■□□□ 1.18
NUP50-219ENST00000497960 BRINP3Q76B58 766 aa22.41■■□□□ 1.18
NUP50-219ENST00000497960 TMEM132EQ6IEE7 984 aa22.4■■□□□ 1.18
NUP50-219ENST00000497960 C14orf93Q9H972 538 aaKnown RBP22.4■■□□□ 1.18
NUP50-219ENST00000497960 MYOM2P54296 1465 aa22.4■■□□□ 1.18
NUP50-219ENST00000497960 MST1RQ04912 1400 aa22.4■■□□□ 1.18
NUP50-219ENST00000497960 LRPPRCP42704 1394 aaKnown RBP22.39■■□□□ 1.18
NUP50-219ENST00000497960 PHLPP1O60346 1717 aa22.39■■□□□ 1.17
NUP50-219ENST00000497960 JCADQ9P266 1359 aa22.38■■□□□ 1.17
NUP50-219ENST00000497960 NRXN1Q9ULB1 1477 aa22.37■■□□□ 1.17
NUP50-219ENST00000497960 NALCNQ8IZF0 1738 aa22.37■■□□□ 1.17
NUP50-219ENST00000497960 ABCC11Q96J66 1382 aa22.37■■□□□ 1.17
NUP50-219ENST00000497960 CFAP70Q5T0N1 1121 aa22.36■■□□□ 1.17
NUP50-219ENST00000497960 TECPR2O15040 1411 aa22.35■■□□□ 1.17
NUP50-219ENST00000497960 DCAF11Q8TEB1 546 aa22.35■■□□□ 1.17
NUP50-219ENST00000497960 STAC3Q96MF2 364 aa22.35■■□□□ 1.17
NUP50-219ENST00000497960 KDM2AQ9Y2K7 1162 aa22.35■■□□□ 1.17
NUP50-219ENST00000497960 YTHDC2Q9H6S0 1430 aaKnown RBP22.34■■□□□ 1.17
NUP50-219ENST00000497960 AHDC1Q5TGY3 1603 aaPredicted RBP22.34■■□□□ 1.17
NUP50-219ENST00000497960 DHX57Q6P158 1386 aaKnown RBP22.34■■□□□ 1.17
NUP50-219ENST00000497960 ASXL1Q8IXJ9 1541 aa22.33■■□□□ 1.17
NUP50-219ENST00000497960 WAPLQ7Z5K2 1190 aa22.33■■□□□ 1.17
NUP50-219ENST00000497960 COL16A1Q07092 1604 aaPredicted RBP22.32■■□□□ 1.16
NUP50-219ENST00000497960 C1orf167Q5SNV9 1468 aa22.32■■□□□ 1.16
NUP50-219ENST00000497960 SIRT1Q96EB6 747 aa22.31■■□□□ 1.16
NUP50-219ENST00000497960 LAMC1P11047 1609 aa22.3■■□□□ 1.16
NUP50-219ENST00000497960 KNDC1Q76NI1 1749 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms