RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 EPAS1Q99814 870 aa13.7□□□□□ -0.22
VPS45-210ENST00000497638 NBPF3Q9H094 633 aa13.7□□□□□ -0.22
VPS45-210ENST00000497638 DDX12PQ92771 950 aa13.68□□□□□ -0.22
VPS45-210ENST00000497638 ADGRL1O94910 1474 aa13.67□□□□□ -0.22
VPS45-210ENST00000497638 COL9A1P20849 921 aa13.67□□□□□ -0.22
VPS45-210ENST00000497638 KIAA0586Q9BVV6 1533 aa13.66□□□□□ -0.22
VPS45-210ENST00000497638 PROX2Q3B8N5 592 aa13.66□□□□□ -0.22
VPS45-210ENST00000497638 WNT2BQ93097 391 aa13.66□□□□□ -0.22
VPS45-210ENST00000497638 RBM33Q96EV2 1170 aaKnown RBP13.66□□□□□ -0.22
VPS45-210ENST00000497638 E2F4Q16254 413 aa13.65□□□□□ -0.22
VPS45-210ENST00000497638 C6orf132Q5T0Z8 1188 aa13.64□□□□□ -0.23
VPS45-210ENST00000497638 RABGEF1Q9UJ41 708 aa13.63□□□□□ -0.23
VPS45-210ENST00000497638 GLI2P10070 1586 aa13.62□□□□□ -0.23
VPS45-210ENST00000497638 HECW2Q9P2P5 1572 aa13.62□□□□□ -0.23
VPS45-210ENST00000497638 PLB1Q6P1J6 1458 aa13.61□□□□□ -0.23
VPS45-210ENST00000497638 ABCC2Q92887 1545 aa13.61□□□□□ -0.23
VPS45-210ENST00000497638 PPRC1Q5VV67 1664 aaKnown RBP13.61□□□□□ -0.23
VPS45-210ENST00000497638 THSD4Q6ZMP0 1018 aa13.61□□□□□ -0.23
VPS45-210ENST00000497638 SPDYE16A6NNV3 312 aaPredicted RBP13.6□□□□□ -0.23
VPS45-210ENST00000497638 PTPRGP23470 1445 aa13.6□□□□□ -0.23
VPS45-210ENST00000497638 NBR1Q14596 966 aa13.6□□□□□ -0.23
VPS45-210ENST00000497638 PDIA6Q15084 440 aa13.6□□□□□ -0.23
VPS45-210ENST00000497638 ASXL2Q76L83 1435 aa13.58□□□□□ -0.24
VPS45-210ENST00000497638 KIAA1468Q9P260 1216 aa13.57□□□□□ -0.24
VPS45-210ENST00000497638 CUL7Q14999 1698 aa13.56□□□□□ -0.24
VPS45-210ENST00000497638 MAP3K7O43318 606 aa13.56□□□□□ -0.24
VPS45-210ENST00000497638 TNIKQ9UKE5 1360 aa13.55□□□□□ -0.24
VPS45-210ENST00000497638 CARMIL2Q6F5E8 1435 aa13.55□□□□□ -0.24
VPS45-210ENST00000497638 UHRF1BP1LA0JNW5 1464 aa13.55□□□□□ -0.24
VPS45-210ENST00000497638 EN1Q05925 392 aaPredicted RBP13.54□□□□□ -0.24
VPS45-210ENST00000497638 ANKK1Q8NFD2 765 aa13.54□□□□□ -0.24
VPS45-210ENST00000497638 TEX14Q8IWB6 1497 aa13.54□□□□□ -0.24
VPS45-210ENST00000497638 COL17A1Q9UMD9 1497 aaPredicted RBP13.54□□□□□ -0.24
VPS45-210ENST00000497638 ONECUT3O60422 494 aaPredicted RBP13.53□□□□□ -0.24
VPS45-210ENST00000497638 GRXCR2A6NFK2 248 aa13.52□□□□□ -0.25
VPS45-210ENST00000497638 TRIM6-TRIM34B2RNG4 842 aa13.52□□□□□ -0.25
VPS45-210ENST00000497638 LAPTM4BQ86VI4 370 aa13.52□□□□□ -0.25
VPS45-210ENST00000497638 IGF1RP08069 1367 aa13.52□□□□□ -0.25
VPS45-210ENST00000497638 MAP3K4Q9Y6R4 1608 aa13.52□□□□□ -0.25
VPS45-210ENST00000497638 TSR1Q2NL82 804 aaKnown RBP13.51□□□□□ -0.25
VPS45-210ENST00000497638 EPRSP07814 1512 aaKnown RBP13.5□□□□□ -0.25
VPS45-210ENST00000497638 KIF27Q86VH2 1401 aa13.5□□□□□ -0.25
VPS45-210ENST00000497638 SEPT9Q9UHD8 586 aaPredicted RBP13.5□□□□□ -0.25
VPS45-210ENST00000497638 ARIH1Q9Y4X5 557 aaPredicted RBP13.5□□□□□ -0.25
VPS45-210ENST00000497638 SUPT5HO00267 1087 aaKnown RBP13.49□□□□□ -0.25
VPS45-210ENST00000497638 UACAQ9BZF9 1416 aa13.48□□□□□ -0.25
VPS45-210ENST00000497638 TTBK1Q5TCY1 1321 aaPredicted RBP13.48□□□□□ -0.25
VPS45-210ENST00000497638 FBXO41Q8TF61 875 aa13.48□□□□□ -0.25
VPS45-210ENST00000497638 ZFRQ96KR1 1074 aaKnown RBP13.48□□□□□ -0.25
VPS45-210ENST00000497638 KDM5BQ9UGL1 1544 aa13.48□□□□□ -0.25
VPS45-210ENST00000497638 IQGAP2Q13576 1575 aa13.47□□□□□ -0.25
VPS45-210ENST00000497638 BCAMP50895 628 aa13.46□□□□□ -0.25
VPS45-210ENST00000497638 PACS2Q86VP3 889 aa13.45□□□□□ -0.26
VPS45-210ENST00000497638 SOWAHBA6NEL2 793 aa13.44□□□□□ -0.26
VPS45-210ENST00000497638 TSHZ2Q9NRE2 1034 aa13.44□□□□□ -0.26
VPS45-210ENST00000497638 FAM98CQ17RN3 349 aaKnown RBP13.43□□□□□ -0.26
VPS45-210ENST00000497638 CARMIL1Q5VZK9 1371 aa13.43□□□□□ -0.26
VPS45-210ENST00000497638 ZCCHC11Q5TAX3 1644 aaKnown RBP13.42□□□□□ -0.26
VPS45-210ENST00000497638 TSKSQ9UJT2 592 aa13.42□□□□□ -0.26
VPS45-210ENST00000497638 DISP1Q96F81 1524 aa13.42□□□□□ -0.26
VPS45-210ENST00000497638 WDR7Q9Y4E6 1490 aa13.41□□□□□ -0.26
VPS45-210ENST00000497638 CERKQ8TCT0 537 aa13.4□□□□□ -0.26
VPS45-210ENST00000497638 CDCA7LQ96GN5 454 aa13.4□□□□□ -0.26
VPS45-210ENST00000497638 PRIM1P49642 420 aaKnown RBP13.39□□□□□ -0.27
VPS45-210ENST00000497638 MAGI3Q5TCQ9 1506 aa13.39□□□□□ -0.27
VPS45-210ENST00000497638 OSBPP22059 807 aa13.38□□□□□ -0.27
VPS45-210ENST00000497638 PRSS12P56730 875 aa13.38□□□□□ -0.27
VPS45-210ENST00000497638 LRCH3Q96II8 777 aa13.38□□□□□ -0.27
VPS45-210ENST00000497638 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.38□□□□□ -0.27
VPS45-210ENST00000497638 UGGT2Q9NYU1 1516 aa13.37□□□□□ -0.27
VPS45-210ENST00000497638 CFAP43Q8NDM7 1665 aa13.37□□□□□ -0.27
VPS45-210ENST00000497638 IFFO2Q5TF58 517 aa13.36□□□□□ -0.27
VPS45-210ENST00000497638 WBP1LQ9NX94 342 aa13.36□□□□□ -0.27
VPS45-210ENST00000497638 NYAP1Q6ZVC0 841 aa13.35□□□□□ -0.27
VPS45-210ENST00000497638 KIAA0556O60303 1618 aa13.35□□□□□ -0.27
VPS45-210ENST00000497638 KIF21BO75037 1637 aa13.35□□□□□ -0.27
VPS45-210ENST00000497638 CD109Q6YHK3 1445 aa13.34□□□□□ -0.27
VPS45-210ENST00000497638 SMAPO00193 183 aa13.34□□□□□ -0.27
VPS45-210ENST00000497638 CDHR5Q9HBB8 845 aa13.33□□□□□ -0.28
VPS45-210ENST00000497638 TSR3Q9UJK0 312 aaKnown RBP13.33□□□□□ -0.28
VPS45-210ENST00000497638 HPS5Q9UPZ3 1129 aa13.33□□□□□ -0.28
VPS45-210ENST00000497638 ARHGEF1Q92888 912 aaKnown RBP13.31□□□□□ -0.28
VPS45-210ENST00000497638 FAM198AQ9UFP1 575 aa13.31□□□□□ -0.28
VPS45-210ENST00000497638 PNMA3Q9UL41 463 aa13.31□□□□□ -0.28
VPS45-210ENST00000497638 NBPF26B4DH59 902 aa13.3□□□□□ -0.28
VPS45-210ENST00000497638 TATDN2Q93075 761 aa13.3□□□□□ -0.28
VPS45-210ENST00000497638 PTPRMP28827 1452 aa13.29□□□□□ -0.28
VPS45-210ENST00000497638 ARAP3Q8WWN8 1544 aa13.29□□□□□ -0.28
VPS45-210ENST00000497638 ADAMTSL3P82987 1691 aa13.28□□□□□ -0.28
VPS45-210ENST00000497638 A0A0G2JS52 829 aa13.28□□□□□ -0.28
VPS45-210ENST00000497638 PPP4CP60510 307 aa13.28□□□□□ -0.28
VPS45-210ENST00000497638 KCNV2Q8TDN2 545 aa13.28□□□□□ -0.28
VPS45-210ENST00000497638 RAPGEF2Q9Y4G8 1499 aa13.28□□□□□ -0.28
VPS45-210ENST00000497638 ITGBL1O95965 494 aaPredicted RBP13.27□□□□□ -0.29
VPS45-210ENST00000497638 SAMD7Q7Z3H4 446 aa13.27□□□□□ -0.29
VPS45-210ENST00000497638 PCF11O94913 1555 aaKnown RBP13.26□□□□□ -0.29
VPS45-210ENST00000497638 NUDT18Q6ZVK8 323 aa13.26□□□□□ -0.29
VPS45-210ENST00000497638 LMTK3Q96Q04 1460 aa13.25□□□□□ -0.29
VPS45-210ENST00000497638 HDGFP51858 240 aaKnown RBP13.25□□□□□ -0.29
VPS45-210ENST00000497638 ABCA8O94911 1581 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms