RNA–Protein interactions for RNA: ENST00000496785.5

CTDSP1-213, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-213ENST00000496785 ZNF335Q9H4Z2 1342 aaPredicted RBP28.43■■■□□ 2.14
CTDSP1-213ENST00000496785 KIF1BO60333 1816 aa28.42■■■□□ 2.14
CTDSP1-213ENST00000496785 CERKQ8TCT0 537 aa28.42■■■□□ 2.14
CTDSP1-213ENST00000496785 CCDC144AA2RUR9 1427 aa28.42■■■□□ 2.14
CTDSP1-213ENST00000496785 LTBP4Q8N2S1 1624 aa28.41■■■□□ 2.14
CTDSP1-213ENST00000496785 FOXD1Q16676 465 aa28.4■■■□□ 2.14
CTDSP1-213ENST00000496785 ZNF326Q5BKZ1 582 aaKnown RBP28.4■■■□□ 2.14
CTDSP1-213ENST00000496785 PLEKHG1Q9ULL1 1385 aa28.39■■■□□ 2.14
CTDSP1-213ENST00000496785 BCANQ96GW7 911 aa28.37■■■□□ 2.13
CTDSP1-213ENST00000496785 CPS1P31327 1500 aa28.37■■■□□ 2.13
CTDSP1-213ENST00000496785 TRIM26Q12899 539 aaPredicted RBP28.36■■■□□ 2.13
CTDSP1-213ENST00000496785 IQSEC2Q5JU85 1478 aa28.35■■■□□ 2.13
CTDSP1-213ENST00000496785 RPGRIP1LQ68CZ1 1315 aa28.31■■■□□ 2.12
CTDSP1-213ENST00000496785 NEXMIFQ5QGS0 1516 aa28.28■■■□□ 2.12
CTDSP1-213ENST00000496785 SLC26A8Q96RN1 970 aa28.28■■■□□ 2.12
CTDSP1-213ENST00000496785 DIP2AQ14689 1571 aa28.28■■■□□ 2.12
CTDSP1-213ENST00000496785 NUTM2DQ5VT03 806 aaPredicted RBP28.27■■■□□ 2.12
CTDSP1-213ENST00000496785 FBXO41Q8TF61 875 aa28.27■■■□□ 2.12
CTDSP1-213ENST00000496785 VGFO15240 615 aaPredicted RBP28.25■■■□□ 2.11
CTDSP1-213ENST00000496785 TBX22Q9Y458 520 aa28.25■■■□□ 2.11
CTDSP1-213ENST00000496785 ANKRD30BQ9BXX2 1392 aa28.23■■■□□ 2.11
CTDSP1-213ENST00000496785 SPATA31E1Q6ZUB1 1445 aa28.22■■■□□ 2.11
CTDSP1-213ENST00000496785 SETBP1Q9Y6X0 1596 aa28.21■■■□□ 2.11
CTDSP1-213ENST00000496785 KCNA6P17658 529 aa28.21■■■□□ 2.11
CTDSP1-213ENST00000496785 ADAMTS13Q76LX8 1427 aa28.2■■■□□ 2.11
CTDSP1-213ENST00000496785 PIK3R4Q99570 1358 aa28.2■■■□□ 2.1
CTDSP1-213ENST00000496785 STRCP1A6NGW2 1772 aa28.17■■■□□ 2.1
CTDSP1-213ENST00000496785 PPLO60437 1756 aa28.17■■■□□ 2.1
CTDSP1-213ENST00000496785 NWD1Q149M9 1564 aa28.17■■■□□ 2.1
CTDSP1-213ENST00000496785 SENP3Q9H4L4 574 aaPredicted RBP28.17■■■□□ 2.1
CTDSP1-213ENST00000496785 NKTRP30414 1462 aaKnown RBP28.16■■■□□ 2.1
CTDSP1-213ENST00000496785 RGL3Q3MIN7 710 aa28.16■■■□□ 2.1
CTDSP1-213ENST00000496785 LRRC7Q96NW7 1537 aa28.15■■■□□ 2.1
CTDSP1-213ENST00000496785 ILDR1Q86SU0 546 aaPredicted RBP28.13■■■□□ 2.09
CTDSP1-213ENST00000496785 NRXN3Q9Y4C0 1643 aa28.13■■■□□ 2.09
CTDSP1-213ENST00000496785 CHD2O14647 1828 aaKnown RBP28.11■■■□□ 2.09
CTDSP1-213ENST00000496785 IFT172Q9UG01 1749 aa28.09■■■□□ 2.09
CTDSP1-213ENST00000496785 PROSER2Q86WR7 435 aaPredicted RBP28.07■■■□□ 2.08
CTDSP1-213ENST00000496785 UBAP1LF5GYI3 381 aa28.06■■■□□ 2.08
CTDSP1-213ENST00000496785 TOM1O60784 492 aa28.06■■■□□ 2.08
CTDSP1-213ENST00000496785 MYOM2P54296 1465 aa28.04■■■□□ 2.08
CTDSP1-213ENST00000496785 TMEM94Q12767 1356 aa28.04■■■□□ 2.08
CTDSP1-213ENST00000496785 STAC3Q96MF2 364 aa28.03■■■□□ 2.08
CTDSP1-213ENST00000496785 ALKQ9UM73 1620 aa28.03■■■□□ 2.08
CTDSP1-213ENST00000496785 ADGRF5Q8IZF2 1346 aa28.02■■■□□ 2.08
CTDSP1-213ENST00000496785 AMOTL2Q9Y2J4 779 aa28.02■■■□□ 2.08
CTDSP1-213ENST00000496785 NCOA3Q9Y6Q9 1424 aa28.01■■■□□ 2.08
CTDSP1-213ENST00000496785 METP08581 1390 aa28.01■■■□□ 2.07
CTDSP1-213ENST00000496785 PIK3C2GO75747 1445 aa27.99■■■□□ 2.07
CTDSP1-213ENST00000496785 PTPRUQ92729 1446 aa27.99■■■□□ 2.07
CTDSP1-213ENST00000496785 XRN1Q8IZH2 1706 aaKnown RBP27.98■■■□□ 2.07
CTDSP1-213ENST00000496785 SETD1AO15047 1707 aaKnown RBP27.97■■■□□ 2.07
CTDSP1-213ENST00000496785 DHX57Q6P158 1386 aaKnown RBP27.97■■■□□ 2.07
CTDSP1-213ENST00000496785 XIRP1Q702N8 1843 aaKnown RBP27.97■■■□□ 2.07
CTDSP1-213ENST00000496785 NRXN1Q9ULB1 1477 aa27.96■■■□□ 2.07
CTDSP1-213ENST00000496785 MSH6P52701 1360 aa27.96■■■□□ 2.07
CTDSP1-213ENST00000496785 LAMC1P11047 1609 aa27.94■■■□□ 2.06
CTDSP1-213ENST00000496785 DCAF11Q8TEB1 546 aa27.93■■■□□ 2.06
CTDSP1-213ENST00000496785 C14orf37Q86TY3 774 aa27.92■■■□□ 2.06
CTDSP1-213ENST00000496785 PRAG1Q86YV5 1406 aa27.92■■■□□ 2.06
CTDSP1-213ENST00000496785 PTCH1Q13635 1447 aa27.91■■■□□ 2.06
CTDSP1-213ENST00000496785 SCAF1Q9H7N4 1312 aaKnown RBP27.9■■■□□ 2.06
CTDSP1-213ENST00000496785 RBM33Q96EV2 1170 aaKnown RBP27.89■■■□□ 2.06
CTDSP1-213ENST00000496785 C14orf93Q9H972 538 aaKnown RBP27.88■■■□□ 2.05
CTDSP1-213ENST00000496785 PIP4K2BP78356 416 aa27.87■■■□□ 2.05
CTDSP1-213ENST00000496785 KDM2AQ9Y2K7 1162 aa27.87■■■□□ 2.05
CTDSP1-213ENST00000496785 C19orf44Q9H6X5 657 aa27.86■■■□□ 2.05
CTDSP1-213ENST00000496785 PCGF6Q9BYE7 350 aa27.85■■■□□ 2.05
CTDSP1-213ENST00000496785 LRPPRCP42704 1394 aaKnown RBP27.84■■■□□ 2.05
CTDSP1-213ENST00000496785 DCCP43146 1447 aa27.83■■■□□ 2.05
CTDSP1-213ENST00000496785 CFAP70Q5T0N1 1121 aa27.82■■■□□ 2.04
CTDSP1-213ENST00000496785 CADPS2Q86UW7 1296 aa27.82■■■□□ 2.04
CTDSP1-213ENST00000496785 TECPR2O15040 1411 aa27.82■■■□□ 2.04
CTDSP1-213ENST00000496785 ATF3P18847 181 aa27.81■■■□□ 2.04
CTDSP1-213ENST00000496785 ABCC11Q96J66 1382 aa27.81■■■□□ 2.04
CTDSP1-213ENST00000496785 ASXL1Q8IXJ9 1541 aa27.81■■■□□ 2.04
CTDSP1-213ENST00000496785 YTHDC2Q9H6S0 1430 aaKnown RBP27.8■■■□□ 2.04
CTDSP1-213ENST00000496785 KNDC1Q76NI1 1749 aa27.79■■■□□ 2.04
CTDSP1-213ENST00000496785 ADGRL3Q9HAR2 1447 aa27.79■■■□□ 2.04
CTDSP1-213ENST00000496785 ROBO2Q9HCK4 1378 aa27.79■■■□□ 2.04
CTDSP1-213ENST00000496785 SIN3AQ96ST3 1273 aa27.79■■■□□ 2.04
CTDSP1-213ENST00000496785 NEUROD1Q13562 356 aa27.78■■■□□ 2.04
CTDSP1-213ENST00000496785 TMEM132EQ6IEE7 984 aa27.78■■■□□ 2.04
CTDSP1-213ENST00000496785 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.78■■■□□ 2.04
CTDSP1-213ENST00000496785 STK26Q9P289 416 aa27.77■■■□□ 2.04
CTDSP1-213ENST00000496785 FAM135BQ49AJ0 1406 aa27.76■■■□□ 2.04
CTDSP1-213ENST00000496785 SLAIN2Q9P270 581 aa27.75■■■□□ 2.03
CTDSP1-213ENST00000496785 SIRT1Q96EB6 747 aa27.74■■■□□ 2.03
CTDSP1-213ENST00000496785 L3MBTL2Q969R5 705 aa27.72■■■□□ 2.03
CTDSP1-213ENST00000496785 ADGRB1O14514 1584 aa27.72■■■□□ 2.03
CTDSP1-213ENST00000496785 NALCNQ8IZF0 1738 aa27.71■■■□□ 2.03
CTDSP1-213ENST00000496785 KIAA1210Q9ULL0 1709 aa27.7■■■□□ 2.03
CTDSP1-213ENST00000496785 DLC1Q96QB1 1528 aa27.69■■■□□ 2.02
CTDSP1-213ENST00000496785 TONSLQ96HA7 1378 aa27.68■■■□□ 2.02
CTDSP1-213ENST00000496785 ROBO1Q9Y6N7 1651 aa27.67■■■□□ 2.02
CTDSP1-213ENST00000496785 HSPA1LP34931 641 aa27.66■■■□□ 2.02
CTDSP1-213ENST00000496785 CLSPNQ9HAW4 1339 aa27.65■■■□□ 2.02
CTDSP1-213ENST00000496785 CDC42BPGQ6DT37 1551 aa27.65■■■□□ 2.02
CTDSP1-213ENST00000496785 WAPLQ7Z5K2 1190 aa27.64■■■□□ 2.02
CTDSP1-213ENST00000496785 MST1RQ04912 1400 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms