RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 MED14O60244 1454 aa14.51□□□□□ -0.09
HDAC3-214ENST00000495485 CCDC144AA2RUR9 1427 aa14.51□□□□□ -0.09
HDAC3-214ENST00000495485 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.51□□□□□ -0.09
HDAC3-214ENST00000495485 TMEM2Q9UHN6 1383 aa14.5□□□□□ -0.09
HDAC3-214ENST00000495485 MYO5BQ9ULV0 1848 aa14.5□□□□□ -0.09
HDAC3-214ENST00000495485 CLTCL1P53675 1640 aa14.49□□□□□ -0.09
HDAC3-214ENST00000495485 HSPA2P54652 639 aa14.49□□□□□ -0.09
HDAC3-214ENST00000495485 L3MBTL2Q969R5 705 aa14.49□□□□□ -0.09
HDAC3-214ENST00000495485 SCAF11Q99590 1463 aaKnown RBP14.49□□□□□ -0.09
HDAC3-214ENST00000495485 RPGRIP1LQ68CZ1 1315 aa14.48□□□□□ -0.09
HDAC3-214ENST00000495485 STAC3Q96MF2 364 aa14.47□□□□□ -0.09
HDAC3-214ENST00000495485 IQGAP1P46940 1657 aa14.46□□□□□ -0.1
HDAC3-214ENST00000495485 ZFYVE9O95405 1425 aa14.45□□□□□ -0.1
HDAC3-214ENST00000495485 TXNDC2Q86VQ3 553 aa14.44□□□□□ -0.1
HDAC3-214ENST00000495485 NPHP4O75161 1426 aaPredicted RBP14.43□□□□□ -0.1
HDAC3-214ENST00000495485 RIMS2Q9UQ26 1411 aa14.43□□□□□ -0.1
HDAC3-214ENST00000495485 EIF4G2P78344 907 aaKnown RBP eCLIP14.43□□□□□ -0.1
HDAC3-214ENST00000495485 CHGAP10645 457 aaKnown RBP14.42□□□□□ -0.1
HDAC3-214ENST00000495485 PLEKHG1Q9ULL1 1385 aa14.42□□□□□ -0.1
HDAC3-214ENST00000495485 VGFO15240 615 aaPredicted RBP14.41□□□□□ -0.1
HDAC3-214ENST00000495485 DIP2AQ14689 1571 aa14.41□□□□□ -0.1
HDAC3-214ENST00000495485 SPATA31E1Q6ZUB1 1445 aa14.41□□□□□ -0.1
HDAC3-214ENST00000495485 PPLO60437 1756 aa14.4□□□□□ -0.1
HDAC3-214ENST00000495485 ZNF326Q5BKZ1 582 aaKnown RBP14.4□□□□□ -0.1
HDAC3-214ENST00000495485 NCKAP5LQ9HCH0 1330 aa14.4□□□□□ -0.1
HDAC3-214ENST00000495485 LTKP29376 864 aa14.39□□□□□ -0.11
HDAC3-214ENST00000495485 NEXMIFQ5QGS0 1516 aa14.39□□□□□ -0.11
HDAC3-214ENST00000495485 PIK3R4Q99570 1358 aa14.38□□□□□ -0.11
HDAC3-214ENST00000495485 IFT172Q9UG01 1749 aa14.38□□□□□ -0.11
HDAC3-214ENST00000495485 SETBP1Q9Y6X0 1596 aa14.37□□□□□ -0.11
HDAC3-214ENST00000495485 DCAF11Q8TEB1 546 aa14.36□□□□□ -0.11
HDAC3-214ENST00000495485 TBX22Q9Y458 520 aa14.35□□□□□ -0.11
HDAC3-214ENST00000495485 MYOM2P54296 1465 aa14.35□□□□□ -0.11
HDAC3-214ENST00000495485 CPS1P31327 1500 aa14.35□□□□□ -0.11
HDAC3-214ENST00000495485 IQSEC2Q5JU85 1478 aa14.34□□□□□ -0.11
HDAC3-214ENST00000495485 HSPA5P11021 654 aaKnown RBP14.33□□□□□ -0.12
HDAC3-214ENST00000495485 NBPF8Q3BBV2 869 aa14.32□□□□□ -0.12
HDAC3-214ENST00000495485 LAMC1P11047 1609 aa14.32□□□□□ -0.12
HDAC3-214ENST00000495485 CHD2O14647 1828 aaKnown RBP14.31□□□□□ -0.12
HDAC3-214ENST00000495485 BCANQ96GW7 911 aa14.31□□□□□ -0.12
HDAC3-214ENST00000495485 KDM2AQ9Y2K7 1162 aa14.31□□□□□ -0.12
HDAC3-214ENST00000495485 RALGAPBQ86X10 1494 aa14.31□□□□□ -0.12
HDAC3-214ENST00000495485 RGL3Q3MIN7 710 aa14.3□□□□□ -0.12
HDAC3-214ENST00000495485 NKTRP30414 1462 aaKnown RBP14.3□□□□□ -0.12
HDAC3-214ENST00000495485 NRXN1Q9ULB1 1477 aa14.3□□□□□ -0.12
HDAC3-214ENST00000495485 NWD1Q149M9 1564 aa14.3□□□□□ -0.12
HDAC3-214ENST00000495485 ADAMTS13Q76LX8 1427 aa14.29□□□□□ -0.12
HDAC3-214ENST00000495485 LTBP4Q8N2S1 1624 aa14.29□□□□□ -0.12
HDAC3-214ENST00000495485 NRXN3Q9Y4C0 1643 aa14.29□□□□□ -0.12
HDAC3-214ENST00000495485 PIK3C2GO75747 1445 aa14.28□□□□□ -0.12
HDAC3-214ENST00000495485 KCNA6P17658 529 aa14.28□□□□□ -0.12
HDAC3-214ENST00000495485 NCOA3Q9Y6Q9 1424 aa14.27□□□□□ -0.12
HDAC3-214ENST00000495485 DDX10Q13206 875 aaKnown RBP14.27□□□□□ -0.13
HDAC3-214ENST00000495485 MIER1Q8N108 512 aa14.27□□□□□ -0.13
HDAC3-214ENST00000495485 CARD11Q9BXL7 1154 aa14.27□□□□□ -0.13
HDAC3-214ENST00000495485 KIAA1210Q9ULL0 1709 aa14.27□□□□□ -0.13
HDAC3-214ENST00000495485 PRAG1Q86YV5 1406 aa14.26□□□□□ -0.13
HDAC3-214ENST00000495485 SETD1AO15047 1707 aaKnown RBP14.26□□□□□ -0.13
HDAC3-214ENST00000495485 ALKQ9UM73 1620 aa14.26□□□□□ -0.13
HDAC3-214ENST00000495485 ROCK2O75116 1388 aaKnown RBP14.25□□□□□ -0.13
HDAC3-214ENST00000495485 HIRIP3Q9BW71 556 aaPredicted RBP14.25□□□□□ -0.13
HDAC3-214ENST00000495485 USP47Q96K76 1375 aa14.24□□□□□ -0.13
HDAC3-214ENST00000495485 ZNF335Q9H4Z2 1342 aaPredicted RBP14.24□□□□□ -0.13
HDAC3-214ENST00000495485 ANP32CO43423 234 aa14.24□□□□□ -0.13
HDAC3-214ENST00000495485 CENPBP07199 599 aaPredicted RBP14.24□□□□□ -0.13
HDAC3-214ENST00000495485 SLC26A8Q96RN1 970 aa14.24□□□□□ -0.13
HDAC3-214ENST00000495485 TRPM1Q7Z4N2 1603 aa14.23□□□□□ -0.13
HDAC3-214ENST00000495485 ADGRF5Q8IZF2 1346 aa14.22□□□□□ -0.13
HDAC3-214ENST00000495485 XRN1Q8IZH2 1706 aaKnown RBP14.22□□□□□ -0.13
HDAC3-214ENST00000495485 SLC24A1O60721 1099 aa14.22□□□□□ -0.13
HDAC3-214ENST00000495485 NUTM2DQ5VT03 806 aaPredicted RBP14.22□□□□□ -0.13
HDAC3-214ENST00000495485 CERKQ8TCT0 537 aa14.22□□□□□ -0.13
HDAC3-214ENST00000495485 C14orf93Q9H972 538 aaKnown RBP14.22□□□□□ -0.13
HDAC3-214ENST00000495485 STRCP1A6NGW2 1772 aa14.22□□□□□ -0.13
HDAC3-214ENST00000495485 PTCH1Q13635 1447 aa14.21□□□□□ -0.13
HDAC3-214ENST00000495485 KNDC1Q76NI1 1749 aa14.21□□□□□ -0.14
HDAC3-214ENST00000495485 TECPR2O15040 1411 aa14.2□□□□□ -0.14
HDAC3-214ENST00000495485 GPRASP1Q5JY77 1395 aa14.2□□□□□ -0.14
HDAC3-214ENST00000495485 SIRT1Q96EB6 747 aa14.19□□□□□ -0.14
HDAC3-214ENST00000495485 LRRC7Q96NW7 1537 aa14.19□□□□□ -0.14
HDAC3-214ENST00000495485 ABCC11Q96J66 1382 aa14.19□□□□□ -0.14
HDAC3-214ENST00000495485 CCDC7Q96M83 1385 aa14.19□□□□□ -0.14
HDAC3-214ENST00000495485 AMOTL2Q9Y2J4 779 aa14.18□□□□□ -0.14
HDAC3-214ENST00000495485 METP08581 1390 aa14.18□□□□□ -0.14
HDAC3-214ENST00000495485 LRPPRCP42704 1394 aaKnown RBP14.18□□□□□ -0.14
HDAC3-214ENST00000495485 WASHC2AQ641Q2 1341 aa14.16□□□□□ -0.14
HDAC3-214ENST00000495485 DLC1Q96QB1 1528 aa14.16□□□□□ -0.14
HDAC3-214ENST00000495485 PROSER2Q86WR7 435 aaPredicted RBP14.16□□□□□ -0.14
HDAC3-214ENST00000495485 DCCP43146 1447 aa14.15□□□□□ -0.14
HDAC3-214ENST00000495485 FAM135BQ49AJ0 1406 aa14.15□□□□□ -0.14
HDAC3-214ENST00000495485 XIRP1Q702N8 1843 aaKnown RBP14.15□□□□□ -0.14
HDAC3-214ENST00000495485 EIF3AQ14152 1382 aaKnown RBP14.15□□□□□ -0.14
HDAC3-214ENST00000495485 CCER2I3L3R5 266 aa14.15□□□□□ -0.14
HDAC3-214ENST00000495485 PTPRUQ92729 1446 aa14.15□□□□□ -0.14
HDAC3-214ENST00000495485 YTHDC2Q9H6S0 1430 aaKnown RBP14.15□□□□□ -0.14
HDAC3-214ENST00000495485 TMEM94Q12767 1356 aa14.14□□□□□ -0.15
HDAC3-214ENST00000495485 TOM1O60784 492 aa14.14□□□□□ -0.15
HDAC3-214ENST00000495485 ADGRB1O14514 1584 aa14.13□□□□□ -0.15
HDAC3-214ENST00000495485 MSH6P52701 1360 aa14.13□□□□□ -0.15
HDAC3-214ENST00000495485 ST20-MTHFSA0A0A6YYL1 179 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms