RNA–Protein interactions for RNA: ENST00000494188.1

RAB1A-205, Transcript of RAB1A, member RAS oncogene family, human

TSL 2

Gene RAB1A, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB1A-205	ENST00000494188	PPP1R15A	O75807	674 aa	Predicted RBP	33.91	■■■■□ 3.02
RAB1A-205	ENST00000494188	HDGF	P51858	240 aa	Known RBP	33.9	■■■■□ 3.02
RAB1A-205	ENST00000494188	KIF1B	O60333	1816 aa		33.9	■■■■□ 3.02
RAB1A-205	ENST00000494188	CCDC144A	A2RUR9	1427 aa		33.89	■■■■□ 3.02
RAB1A-205	ENST00000494188	ZNF326	Q5BKZ1	582 aa	Known RBP	33.89	■■■■□ 3.02
RAB1A-205	ENST00000494188	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	33.87	■■■■□ 3.01
RAB1A-205	ENST00000494188	NUTM2D	Q5VT03	806 aa	Predicted RBP	33.86	■■■■□ 3.01
RAB1A-205	ENST00000494188	LTBP4	Q8N2S1	1624 aa		33.86	■■■■□ 3.01
RAB1A-205	ENST00000494188	BCAN	Q96GW7	911 aa		33.85	■■■■□ 3.01
RAB1A-205	ENST00000494188	SENP3	Q9H4L4	574 aa	Predicted RBP	33.84	■■■■□ 3.01
RAB1A-205	ENST00000494188	PLEKHG1	Q9ULL1	1385 aa		33.82	■■■■□ 3
RAB1A-205	ENST00000494188	CERK	Q8TCT0	537 aa		33.81	■■■■□ 3
RAB1A-205	ENST00000494188	SLC26A8	Q96RN1	970 aa		33.77	■■■■□ 3
RAB1A-205	ENST00000494188	NEXMIF	Q5QGS0	1516 aa		33.77	■■■■□ 3
RAB1A-205	ENST00000494188	CPS1	P31327	1500 aa		33.72	■■■□□ 2.99
RAB1A-205	ENST00000494188	ANKRD30B	Q9BXX2	1392 aa		33.72	■■■□□ 2.99
RAB1A-205	ENST00000494188	SPATA31E1	Q6ZUB1	1445 aa		33.7	■■■□□ 2.98
RAB1A-205	ENST00000494188	RGL3	Q3MIN7	710 aa		33.68	■■■□□ 2.98
RAB1A-205	ENST00000494188	RPGRIP1L	Q68CZ1	1315 aa		33.68	■■■□□ 2.98
RAB1A-205	ENST00000494188	STRCP1	A6NGW2	1772 aa		33.66	■■■□□ 2.98
RAB1A-205	ENST00000494188	ADAMTS13	Q76LX8	1427 aa		33.66	■■■□□ 2.98
RAB1A-205	ENST00000494188	DIP2A	Q14689	1571 aa		33.65	■■■□□ 2.98
RAB1A-205	ENST00000494188	PPL	O60437	1756 aa		33.64	■■■□□ 2.98
RAB1A-205	ENST00000494188	SETBP1	Q9Y6X0	1596 aa		33.64	■■■□□ 2.98
RAB1A-205	ENST00000494188	IQSEC2	Q5JU85	1478 aa		33.63	■■■□□ 2.97
RAB1A-205	ENST00000494188	VGF	O15240	615 aa	Predicted RBP	33.62	■■■□□ 2.97
RAB1A-205	ENST00000494188	NRXN3	Q9Y4C0	1643 aa		33.61	■■■□□ 2.97
RAB1A-205	ENST00000494188	TBX22	Q9Y458	520 aa		33.61	■■■□□ 2.97
RAB1A-205	ENST00000494188	KCNA6	P17658	529 aa		33.58	■■■□□ 2.97
RAB1A-205	ENST00000494188	NWD1	Q149M9	1564 aa		33.57	■■■□□ 2.96
RAB1A-205	ENST00000494188	FBXO41	Q8TF61	875 aa		33.57	■■■□□ 2.96
RAB1A-205	ENST00000494188	LRRC7	Q96NW7	1537 aa		33.56	■■■□□ 2.96
RAB1A-205	ENST00000494188	IFT172	Q9UG01	1749 aa		33.56	■■■□□ 2.96
RAB1A-205	ENST00000494188	NKTR	P30414	1462 aa	Known RBP	33.51	■■■□□ 2.96
RAB1A-205	ENST00000494188	PIK3R4	Q99570	1358 aa		33.51	■■■□□ 2.96
RAB1A-205	ENST00000494188	CHD2	O14647	1828 aa	Known RBP	33.51	■■■□□ 2.95
RAB1A-205	ENST00000494188	ILDR1	Q86SU0	546 aa	Predicted RBP	33.5	■■■□□ 2.95
RAB1A-205	ENST00000494188	ADGRF5	Q8IZF2	1346 aa		33.5	■■■□□ 2.95
RAB1A-205	ENST00000494188	DHX57	Q6P158	1386 aa	Known RBP	33.48	■■■□□ 2.95
RAB1A-205	ENST00000494188	MET	P08581	1390 aa		33.47	■■■□□ 2.95
RAB1A-205	ENST00000494188	PROSER2	Q86WR7	435 aa	Predicted RBP	33.45	■■■□□ 2.95
RAB1A-205	ENST00000494188	PCGF6	Q9BYE7	350 aa		33.45	■■■□□ 2.95
RAB1A-205	ENST00000494188	ALK	Q9UM73	1620 aa		33.45	■■■□□ 2.95
RAB1A-205	ENST00000494188	PTPRU	Q92729	1446 aa		33.45	■■■□□ 2.94
RAB1A-205	ENST00000494188	TMEM94	Q12767	1356 aa		33.44	■■■□□ 2.94
RAB1A-205	ENST00000494188	MYOM2	P54296	1465 aa		33.44	■■■□□ 2.94
RAB1A-205	ENST00000494188	UBAP1L	F5GYI3	381 aa		33.42	■■■□□ 2.94
RAB1A-205	ENST00000494188	AMOTL2	Q9Y2J4	779 aa		33.42	■■■□□ 2.94
RAB1A-205	ENST00000494188	SETD1A	O15047	1707 aa	Known RBP	33.42	■■■□□ 2.94
RAB1A-205	ENST00000494188	RBM33	Q96EV2	1170 aa	Known RBP	33.41	■■■□□ 2.94
RAB1A-205	ENST00000494188	PIK3C2G	O75747	1445 aa		33.41	■■■□□ 2.94
RAB1A-205	ENST00000494188	XIRP1	Q702N8	1843 aa	Known RBP	33.39	■■■□□ 2.94
RAB1A-205	ENST00000494188	XRN1	Q8IZH2	1706 aa	Known RBP	33.39	■■■□□ 2.94
RAB1A-205	ENST00000494188	NRXN1	Q9ULB1	1477 aa		33.37	■■■□□ 2.93
RAB1A-205	ENST00000494188	DCAF11	Q8TEB1	546 aa		33.36	■■■□□ 2.93
RAB1A-205	ENST00000494188	KDM2A	Q9Y2K7	1162 aa		33.35	■■■□□ 2.93
RAB1A-205	ENST00000494188	TOM1	O60784	492 aa		33.33	■■■□□ 2.93
RAB1A-205	ENST00000494188	SIN3A	Q96ST3	1273 aa		33.32	■■■□□ 2.92
RAB1A-205	ENST00000494188	C14orf37	Q86TY3	774 aa		33.29	■■■□□ 2.92
RAB1A-205	ENST00000494188	LAMC1	P11047	1609 aa		33.28	■■■□□ 2.92
RAB1A-205	ENST00000494188	NEUROD1	Q13562	356 aa		33.28	■■■□□ 2.92
RAB1A-205	ENST00000494188	SCAF1	Q9H7N4	1312 aa	Known RBP	33.28	■■■□□ 2.92
RAB1A-205	ENST00000494188	MSH6	P52701	1360 aa		33.27	■■■□□ 2.92
RAB1A-205	ENST00000494188	ASXL1	Q8IXJ9	1541 aa		33.27	■■■□□ 2.92
RAB1A-205	ENST00000494188	PIP4K2B	P78356	416 aa		33.26	■■■□□ 2.91
RAB1A-205	ENST00000494188	STAC3	Q96MF2	364 aa		33.26	■■■□□ 2.91
RAB1A-205	ENST00000494188	NCOA3	Q9Y6Q9	1424 aa		33.26	■■■□□ 2.91
RAB1A-205	ENST00000494188	CFAP70	Q5T0N1	1121 aa		33.25	■■■□□ 2.91
RAB1A-205	ENST00000494188	C14orf93	Q9H972	538 aa	Known RBP	33.25	■■■□□ 2.91
RAB1A-205	ENST00000494188	PTCH1	Q13635	1447 aa		33.24	■■■□□ 2.91
RAB1A-205	ENST00000494188	TMEM132E	Q6IEE7	984 aa		33.23	■■■□□ 2.91
RAB1A-205	ENST00000494188	STK26	Q9P289	416 aa		33.21	■■■□□ 2.91
RAB1A-205	ENST00000494188	ROBO2	Q9HCK4	1378 aa		33.21	■■■□□ 2.91
RAB1A-205	ENST00000494188	PRAG1	Q86YV5	1406 aa		33.2	■■■□□ 2.91
RAB1A-205	ENST00000494188	LRPPRC	P42704	1394 aa	Known RBP	33.19	■■■□□ 2.9
RAB1A-205	ENST00000494188	YTHDC2	Q9H6S0	1430 aa	Known RBP	33.17	■■■□□ 2.9
RAB1A-205	ENST00000494188	L3MBTL2	Q969R5	705 aa		33.15	■■■□□ 2.9
RAB1A-205	ENST00000494188	KNDC1	Q76NI1	1749 aa		33.14	■■■□□ 2.9
RAB1A-205	ENST00000494188	TECPR2	O15040	1411 aa		33.14	■■■□□ 2.9
RAB1A-205	ENST00000494188	C19orf44	Q9H6X5	657 aa		33.14	■■■□□ 2.9
RAB1A-205	ENST00000494188	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	33.14	■■■□□ 2.89
RAB1A-205	ENST00000494188	ADGRL3	Q9HAR2	1447 aa		33.12	■■■□□ 2.89
RAB1A-205	ENST00000494188	ABCC11	Q96J66	1382 aa		33.12	■■■□□ 2.89
RAB1A-205	ENST00000494188	ATF3	P18847	181 aa		33.11	■■■□□ 2.89
RAB1A-205	ENST00000494188	ADGRB1	O14514	1584 aa		33.11	■■■□□ 2.89
RAB1A-205	ENST00000494188	NALCN	Q8IZF0	1738 aa		33.11	■■■□□ 2.89
RAB1A-205	ENST00000494188	CADPS2	Q86UW7	1296 aa		33.08	■■■□□ 2.89
RAB1A-205	ENST00000494188	DCC	P43146	1447 aa		33.08	■■■□□ 2.89
RAB1A-205	ENST00000494188	TONSL	Q96HA7	1378 aa		33.06	■■■□□ 2.88
RAB1A-205	ENST00000494188	WAPL	Q7Z5K2	1190 aa		33.04	■■■□□ 2.88
RAB1A-205	ENST00000494188	SLAIN2	Q9P270	581 aa		33.04	■■■□□ 2.88
RAB1A-205	ENST00000494188	KIAA1210	Q9ULL0	1709 aa		33.03	■■■□□ 2.88
RAB1A-205	ENST00000494188	PLEKHH1	Q9ULM0	1364 aa		33.03	■■■□□ 2.88
RAB1A-205	ENST00000494188	FAM135B	Q49AJ0	1406 aa		33.02	■■■□□ 2.88
RAB1A-205	ENST00000494188	ROBO1	Q9Y6N7	1651 aa		33.01	■■■□□ 2.87
RAB1A-205	ENST00000494188	TRAK1	Q9UPV9	953 aa		33	■■■□□ 2.87
RAB1A-205	ENST00000494188	DLC1	Q96QB1	1528 aa		33	■■■□□ 2.87
RAB1A-205	ENST00000494188	HSPA1L	P34931	641 aa		32.99	■■■□□ 2.87
RAB1A-205	ENST00000494188	SIRT1	Q96EB6	747 aa		32.98	■■■□□ 2.87
RAB1A-205	ENST00000494188	PRAM1	Q96QH2	718 aa		32.97	■■■□□ 2.87

Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms