RNA–Protein interactions for RNA: ENST00000493583.5

TFE3-204, Transcript of transcription factor binding to IGHM enhancer 3, humanhuman

TSL 2

Gene TFE3, Length 3,279 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFE3-204ENST00000493583 RALGAPBQ86X10 1494 aa17.82■□□□□ 0.44
TFE3-204ENST00000493583 CFAP70Q5T0N1 1121 aa17.82■□□□□ 0.44
TFE3-204ENST00000493583 TMEM132EQ6IEE7 984 aa17.81■□□□□ 0.44
TFE3-204ENST00000493583 TRAPPC8Q9Y2L5 1435 aa17.81■□□□□ 0.44
TFE3-204ENST00000493583 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
TFE3-204ENST00000493583 FOXD4L1Q9NU39 408 aa17.79■□□□□ 0.44
TFE3-204ENST00000493583 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.79■□□□□ 0.44
TFE3-204ENST00000493583 CDC42BPAQ5VT25 1732 aa17.79■□□□□ 0.44
TFE3-204ENST00000493583 SCAPERQ9BY12 1400 aa17.79■□□□□ 0.44
TFE3-204ENST00000493583 CCDC141Q6ZP82 1450 aa17.79■□□□□ 0.44
TFE3-204ENST00000493583 TRAK1Q9UPV9 953 aa17.78■□□□□ 0.44
TFE3-204ENST00000493583 SLFN5Q08AF3 891 aa17.77■□□□□ 0.44
TFE3-204ENST00000493583 ABCA8O94911 1581 aa17.77■□□□□ 0.44
TFE3-204ENST00000493583 RAPGEF3O95398 923 aa17.77■□□□□ 0.43
TFE3-204ENST00000493583 PANK2Q9BZ23 570 aa17.77■□□□□ 0.43
TFE3-204ENST00000493583 STK26Q9P289 416 aa17.76■□□□□ 0.43
TFE3-204ENST00000493583 ERBINQ96RT1 1412 aa17.76■□□□□ 0.43
TFE3-204ENST00000493583 RLBP1P12271 317 aa17.76■□□□□ 0.43
TFE3-204ENST00000493583 MFAP1P55081 439 aaKnown RBP17.74■□□□□ 0.43
TFE3-204ENST00000493583 MLECQ14165 292 aa17.74■□□□□ 0.43
TFE3-204ENST00000493583 TTC37Q6PGP7 1564 aa17.74■□□□□ 0.43
TFE3-204ENST00000493583 ITSN2Q9NZM3 1697 aa17.74■□□□□ 0.43
TFE3-204ENST00000493583 AMER1Q5JTC6 1135 aaPredicted RBP17.74■□□□□ 0.43
TFE3-204ENST00000493583 SAMD9LQ8IVG5 1584 aa17.73■□□□□ 0.43
TFE3-204ENST00000493583 PRAG1Q86YV5 1406 aa17.73■□□□□ 0.43
TFE3-204ENST00000493583 RRAGDQ9NQL2 400 aaPredicted RBP17.73■□□□□ 0.43
TFE3-204ENST00000493583 ARHGEF12Q9NZN5 1544 aa17.73■□□□□ 0.43
TFE3-204ENST00000493583 FAM135AQ9P2D6 1515 aa17.73■□□□□ 0.43
TFE3-204ENST00000493583 PLEKHG5O94827 1062 aa17.73■□□□□ 0.43
TFE3-204ENST00000493583 CYB5RLQ6IPT4 315 aa17.73■□□□□ 0.43
TFE3-204ENST00000493583 PCDHB15Q9Y5E8 787 aa17.73■□□□□ 0.43
TFE3-204ENST00000493583 RSPH4AQ5TD94 716 aa17.71■□□□□ 0.43
TFE3-204ENST00000493583 USP19O94966 1318 aa17.71■□□□□ 0.43
TFE3-204ENST00000493583 GLIPR1L2Q4G1C9 344 aa17.71■□□□□ 0.42
TFE3-204ENST00000493583 UHRF1BP1Q6BDS2 1440 aa17.7■□□□□ 0.42
TFE3-204ENST00000493583 CFAP65Q6ZU64 1925 aaKnown RBP17.7■□□□□ 0.42
TFE3-204ENST00000493583 MAGI2Q86UL8 1455 aa17.7■□□□□ 0.42
TFE3-204ENST00000493583 CENPJQ9HC77 1338 aaPredicted RBP17.7■□□□□ 0.42
TFE3-204ENST00000493583 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.7■□□□□ 0.428e-8■■■■□ 22.6
TFE3-204ENST00000493583 NAP1L5Q96NT1 182 aaPredicted RBP17.69■□□□□ 0.42
TFE3-204ENST00000493583 TSR2Q969E8 191 aaKnown RBP17.69■□□□□ 0.42
TFE3-204ENST00000493583 ADGRF5Q8IZF2 1346 aa17.68■□□□□ 0.42
TFE3-204ENST00000493583 ADGRL2O95490 1459 aa17.68■□□□□ 0.42
TFE3-204ENST00000493583 PLA2R1Q13018 1463 aa17.68■□□□□ 0.42
TFE3-204ENST00000493583 PDZRN3Q9UPQ7 1066 aa17.67■□□□□ 0.42
TFE3-204ENST00000493583 A2MP01023 1474 aa17.67■□□□□ 0.42
TFE3-204ENST00000493583 CARD14Q9BXL6 1004 aa17.67■□□□□ 0.42
TFE3-204ENST00000493583 SLC12A5Q9H2X9 1139 aa17.66■□□□□ 0.42
TFE3-204ENST00000493583 TBC1D2Q9BYX2 928 aa17.66■□□□□ 0.42
TFE3-204ENST00000493583 ZMYND15Q9H091 742 aa17.65■□□□□ 0.42
TFE3-204ENST00000493583 POLR1AO95602 1720 aaPredicted RBP17.65■□□□□ 0.42
TFE3-204ENST00000493583 CDC42BPBQ9Y5S2 1711 aa17.64■□□□□ 0.41
TFE3-204ENST00000493583 WWC1Q8IX03 1113 aa17.64■□□□□ 0.41
TFE3-204ENST00000493583 BLMP54132 1417 aaPredicted RBP17.64■□□□□ 0.41
TFE3-204ENST00000493583 ZBTB7CA1YPR0 619 aa17.64■□□□□ 0.41
TFE3-204ENST00000493583 ADGBQ8N7X0 1667 aa17.63■□□□□ 0.41
TFE3-204ENST00000493583 TCP11L2Q8N4U5 519 aa17.63■□□□□ 0.41
TFE3-204ENST00000493583 BECN1Q14457 450 aa17.62■□□□□ 0.41
TFE3-204ENST00000493583 U2SURPO15042 1029 aaKnown RBP17.62■□□□□ 0.41
TFE3-204ENST00000493583 MORC1Q86VD1 984 aa17.62■□□□□ 0.41
TFE3-204ENST00000493583 RSPH6AQ9H0K4 717 aa17.62■□□□□ 0.41
TFE3-204ENST00000493583 UPF2Q9HAU5 1272 aaKnown RBP17.62■□□□□ 0.41
TFE3-204ENST00000493583 ZNF521Q96K83 1311 aa17.61■□□□□ 0.41
TFE3-204ENST00000493583 E9PSI1 815 aa17.6■□□□□ 0.41
TFE3-204ENST00000493583 ARID3AQ99856 593 aa17.6■□□□□ 0.41
TFE3-204ENST00000493583 PODXL2Q9NZ53 605 aa17.6■□□□□ 0.41
TFE3-204ENST00000493583 FBLN1P23142 703 aa17.6■□□□□ 0.41
TFE3-204ENST00000493583 COL17A1Q9UMD9 1497 aaPredicted RBP17.6■□□□□ 0.41
TFE3-204ENST00000493583 U2AF1L5P0DN76 240 aaPredicted RBP17.6■□□□□ 0.41
TFE3-204ENST00000493583 U2AF1Q01081 240 aaKnown RBP eCLIP17.6■□□□□ 0.41
TFE3-204ENST00000493583 CLASP1Q7Z460 1538 aa17.6■□□□□ 0.41
TFE3-204ENST00000493583 FTSJ3Q8IY81 847 aaKnown RBP17.59■□□□□ 0.41
TFE3-204ENST00000493583 XRCC6P12956 609 aaKnown RBP eCLIP17.59■□□□□ 0.41
TFE3-204ENST00000493583 UGGT1Q9NYU2 1555 aa17.59■□□□□ 0.41
TFE3-204ENST00000493583 ZMYM4Q5VZL5 1548 aa17.59■□□□□ 0.41
TFE3-204ENST00000493583 PLCH2O75038 1416 aa17.58■□□□□ 0.41
TFE3-204ENST00000493583 ELL2O00472 640 aaPredicted RBP17.58■□□□□ 0.4
TFE3-204ENST00000493583 ITPRIPQ8IWB1 547 aa17.58■□□□□ 0.4
TFE3-204ENST00000493583 MTHFSP49914 203 aa17.57■□□□□ 0.4
TFE3-204ENST00000493583 STAG3Q9UJ98 1225 aa17.57■□□□□ 0.4
TFE3-204ENST00000493583 KDM5DQ9BY66 1539 aa17.56■□□□□ 0.4
TFE3-204ENST00000493583 KANK1Q14678 1352 aa17.56■□□□□ 0.4
TFE3-204ENST00000493583 CROCC2H7BZ55 1655 aa17.56■□□□□ 0.4
TFE3-204ENST00000493583 RARSP54136 660 aaKnown RBP17.56■□□□□ 0.4
TFE3-204ENST00000493583 TPRNQ4KMQ1 711 aa17.56■□□□□ 0.4
TFE3-204ENST00000493583 C1orf115Q9H7X2 142 aa17.55■□□□□ 0.4
TFE3-204ENST00000493583 ABCC2Q92887 1545 aa17.55■□□□□ 0.4
TFE3-204ENST00000493583 FANCAO15360 1455 aa17.54■□□□□ 0.4
TFE3-204ENST00000493583 LNPKQ9C0E8 428 aa17.54■□□□□ 0.4
TFE3-204ENST00000493583 A0A0U1RQG5 324 aaPredicted RBP17.54■□□□□ 0.4
TFE3-204ENST00000493583 GOLGA6L3A6NEY3 463 aa17.54■□□□□ 0.4
TFE3-204ENST00000493583 CABP2Q9NPB3 220 aa17.54■□□□□ 0.4
TFE3-204ENST00000493583 ADCY10Q96PN6 1610 aa17.54■□□□□ 0.4
TFE3-204ENST00000493583 NKTRP30414 1462 aaKnown RBP17.53■□□□□ 0.4
TFE3-204ENST00000493583 SHANK2Q9UPX8 1470 aa17.53■□□□□ 0.4
TFE3-204ENST00000493583 SHROOM2Q13796 1616 aa17.52■□□□□ 0.4
TFE3-204ENST00000493583 FAM43AQ8N2R8 423 aa17.52■□□□□ 0.4
TFE3-204ENST00000493583 SMC4Q9NTJ3 1288 aa17.52■□□□□ 0.4
TFE3-204ENST00000493583 WDR7Q9Y4E6 1490 aa17.52■□□□□ 0.4
TFE3-204ENST00000493583 CGNL1Q0VF96 1302 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms