RNA–Protein interactions for RNA: ENST00000493166.1

CLIP2-209, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 4

Gene CLIP2, Length 561 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-209ENST00000493166 ZFYVE9O95405 1425 aa18.9■□□□□ 0.62
CLIP2-209ENST00000493166 CCDC144AA2RUR9 1427 aa18.88■□□□□ 0.61
CLIP2-209ENST00000493166 HDGFP51858 240 aaKnown RBP18.86■□□□□ 0.61
CLIP2-209ENST00000493166 PPLO60437 1756 aa18.86■□□□□ 0.61
CLIP2-209ENST00000493166 PPP1R15AO75807 674 aaPredicted RBP18.85■□□□□ 0.61
CLIP2-209ENST00000493166 ZNF326Q5BKZ1 582 aaKnown RBP18.85■□□□□ 0.61
CLIP2-209ENST00000493166 LTBP4Q8N2S1 1624 aa18.85■□□□□ 0.61
CLIP2-209ENST00000493166 NEXMIFQ5QGS0 1516 aa18.84■□□□□ 0.61
CLIP2-209ENST00000493166 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.84■□□□□ 0.61
CLIP2-209ENST00000493166 STRCP1A6NGW2 1772 aa18.83■□□□□ 0.61
CLIP2-209ENST00000493166 ZNF335Q9H4Z2 1342 aaPredicted RBP18.83■□□□□ 0.61
CLIP2-209ENST00000493166 FBXO41Q8TF61 875 aa18.83■□□□□ 0.6
CLIP2-209ENST00000493166 IFT172Q9UG01 1749 aa18.83■□□□□ 0.6
CLIP2-209ENST00000493166 PLEKHG1Q9ULL1 1385 aa18.81■□□□□ 0.6
CLIP2-209ENST00000493166 NUTM2DQ5VT03 806 aaPredicted RBP18.81■□□□□ 0.6
CLIP2-209ENST00000493166 BCANQ96GW7 911 aa18.81■□□□□ 0.6
CLIP2-209ENST00000493166 SENP3Q9H4L4 574 aaPredicted RBP18.79■□□□□ 0.6
CLIP2-209ENST00000493166 DIP2AQ14689 1571 aa18.79■□□□□ 0.6
CLIP2-209ENST00000493166 CPS1P31327 1500 aa18.79■□□□□ 0.6
CLIP2-209ENST00000493166 ANKRD30BQ9BXX2 1392 aa18.78■□□□□ 0.6
CLIP2-209ENST00000493166 NRXN3Q9Y4C0 1643 aa18.78■□□□□ 0.6
CLIP2-209ENST00000493166 CHD2O14647 1828 aaKnown RBP18.77■□□□□ 0.6
CLIP2-209ENST00000493166 SPATA31E1Q6ZUB1 1445 aa18.77■□□□□ 0.6
CLIP2-209ENST00000493166 CERKQ8TCT0 537 aa18.77■□□□□ 0.6
CLIP2-209ENST00000493166 SETBP1Q9Y6X0 1596 aa18.76■□□□□ 0.59
CLIP2-209ENST00000493166 SLC26A8Q96RN1 970 aa18.76■□□□□ 0.59
CLIP2-209ENST00000493166 RPGRIP1LQ68CZ1 1315 aa18.74■□□□□ 0.59
CLIP2-209ENST00000493166 NWD1Q149M9 1564 aa18.73■□□□□ 0.59
CLIP2-209ENST00000493166 IQSEC2Q5JU85 1478 aa18.73■□□□□ 0.59
CLIP2-209ENST00000493166 RGL3Q3MIN7 710 aa18.73■□□□□ 0.59
CLIP2-209ENST00000493166 ADAMTS13Q76LX8 1427 aa18.73■□□□□ 0.59
CLIP2-209ENST00000493166 XIRP1Q702N8 1843 aaKnown RBP18.72■□□□□ 0.59
CLIP2-209ENST00000493166 SETD1AO15047 1707 aaKnown RBP18.71■□□□□ 0.59
CLIP2-209ENST00000493166 VGFO15240 615 aaPredicted RBP18.71■□□□□ 0.59
CLIP2-209ENST00000493166 TBX22Q9Y458 520 aa18.69■□□□□ 0.58
CLIP2-209ENST00000493166 LRRC7Q96NW7 1537 aa18.68■□□□□ 0.58
CLIP2-209ENST00000493166 NKTRP30414 1462 aaKnown RBP18.67■□□□□ 0.58
CLIP2-209ENST00000493166 ALKQ9UM73 1620 aa18.67■□□□□ 0.58
CLIP2-209ENST00000493166 KCNA6P17658 529 aa18.66■□□□□ 0.58
CLIP2-209ENST00000493166 PIK3R4Q99570 1358 aa18.66■□□□□ 0.58
CLIP2-209ENST00000493166 XRN1Q8IZH2 1706 aaKnown RBP18.66■□□□□ 0.58
CLIP2-209ENST00000493166 DHX57Q6P158 1386 aaKnown RBP18.65■□□□□ 0.58
CLIP2-209ENST00000493166 MYOM2P54296 1465 aa18.65■□□□□ 0.58
CLIP2-209ENST00000493166 PCGF6Q9BYE7 350 aa18.64■□□□□ 0.57
CLIP2-209ENST00000493166 LAMC1P11047 1609 aa18.63■□□□□ 0.57
CLIP2-209ENST00000493166 ADGRF5Q8IZF2 1346 aa18.63■□□□□ 0.57
CLIP2-209ENST00000493166 PIK3C2GO75747 1445 aa18.61■□□□□ 0.57
CLIP2-209ENST00000493166 METP08581 1390 aa18.61■□□□□ 0.57
CLIP2-209ENST00000493166 PTPRUQ92729 1446 aa18.6■□□□□ 0.57
CLIP2-209ENST00000493166 NRXN1Q9ULB1 1477 aa18.59■□□□□ 0.57
CLIP2-209ENST00000493166 PROSER2Q86WR7 435 aaPredicted RBP18.59■□□□□ 0.57
CLIP2-209ENST00000493166 TMEM94Q12767 1356 aa18.57■□□□□ 0.56
CLIP2-209ENST00000493166 DCAF11Q8TEB1 546 aa18.57■□□□□ 0.56
CLIP2-209ENST00000493166 AMOTL2Q9Y2J4 779 aa18.57■□□□□ 0.56
CLIP2-209ENST00000493166 UBAP1LF5GYI3 381 aa18.56■□□□□ 0.56
CLIP2-209ENST00000493166 KNDC1Q76NI1 1749 aa18.56■□□□□ 0.56
CLIP2-209ENST00000493166 RBM33Q96EV2 1170 aaKnown RBP18.55■□□□□ 0.56
CLIP2-209ENST00000493166 KDM2AQ9Y2K7 1162 aa18.55■□□□□ 0.56
CLIP2-209ENST00000493166 ASXL1Q8IXJ9 1541 aa18.54■□□□□ 0.56
CLIP2-209ENST00000493166 SIN3AQ96ST3 1273 aa18.54■□□□□ 0.56
CLIP2-209ENST00000493166 STAC3Q96MF2 364 aa18.53■□□□□ 0.56
CLIP2-209ENST00000493166 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.53■□□□□ 0.56
CLIP2-209ENST00000493166 NALCNQ8IZF0 1738 aa18.52■□□□□ 0.56
CLIP2-209ENST00000493166 TOM1O60784 492 aa18.52■□□□□ 0.56
CLIP2-209ENST00000493166 NEUROD1Q13562 356 aa18.52■□□□□ 0.56
CLIP2-209ENST00000493166 PTCH1Q13635 1447 aa18.51■□□□□ 0.55
CLIP2-209ENST00000493166 NCOA3Q9Y6Q9 1424 aa18.51■□□□□ 0.55
CLIP2-209ENST00000493166 MSH6P52701 1360 aa18.51■□□□□ 0.55
CLIP2-209ENST00000493166 KIAA1210Q9ULL0 1709 aa18.51■□□□□ 0.55
CLIP2-209ENST00000493166 PRAG1Q86YV5 1406 aa18.5■□□□□ 0.55
CLIP2-209ENST00000493166 C14orf37Q86TY3 774 aa18.5■□□□□ 0.55
CLIP2-209ENST00000493166 C14orf93Q9H972 538 aaKnown RBP18.5■□□□□ 0.55
CLIP2-209ENST00000493166 CFAP70Q5T0N1 1121 aa18.49■□□□□ 0.55
CLIP2-209ENST00000493166 TMEM132EQ6IEE7 984 aa18.48■□□□□ 0.55
CLIP2-209ENST00000493166 SCAF1Q9H7N4 1312 aaKnown RBP18.48■□□□□ 0.55
CLIP2-209ENST00000493166 LRPPRCP42704 1394 aaKnown RBP18.47■□□□□ 0.55
CLIP2-209ENST00000493166 PIP4K2BP78356 416 aa18.47■□□□□ 0.55
CLIP2-209ENST00000493166 YTHDC2Q9H6S0 1430 aaKnown RBP18.47■□□□□ 0.55
CLIP2-209ENST00000493166 ROBO2Q9HCK4 1378 aa18.46■□□□□ 0.55
CLIP2-209ENST00000493166 STK26Q9P289 416 aa18.46■□□□□ 0.55
CLIP2-209ENST00000493166 TECPR2O15040 1411 aa18.46■□□□□ 0.55
CLIP2-209ENST00000493166 ADGRB1O14514 1584 aa18.46■□□□□ 0.55
CLIP2-209ENST00000493166 L3MBTL2Q969R5 705 aa18.45■□□□□ 0.54
CLIP2-209ENST00000493166 ROBO1Q9Y6N7 1651 aa18.44■□□□□ 0.54
CLIP2-209ENST00000493166 ABCC11Q96J66 1382 aa18.43■□□□□ 0.54
CLIP2-209ENST00000493166 ADGRL3Q9HAR2 1447 aa18.43■□□□□ 0.54
CLIP2-209ENST00000493166 C19orf44Q9H6X5 657 aa18.43■□□□□ 0.54
CLIP2-209ENST00000493166 TRPM1Q7Z4N2 1603 aa18.42■□□□□ 0.54
CLIP2-209ENST00000493166 DCCP43146 1447 aa18.42■□□□□ 0.54
CLIP2-209ENST00000493166 ARHGEF28Q8N1W1 1705 aaKnown RBP18.42■□□□□ 0.54
CLIP2-209ENST00000493166 TONSLQ96HA7 1378 aa18.42■□□□□ 0.54
CLIP2-209ENST00000493166 ATF3P18847 181 aa18.41■□□□□ 0.54
CLIP2-209ENST00000493166 DLC1Q96QB1 1528 aa18.4■□□□□ 0.54
CLIP2-209ENST00000493166 CADPS2Q86UW7 1296 aa18.4■□□□□ 0.54
CLIP2-209ENST00000493166 FAM135BQ49AJ0 1406 aa18.39■□□□□ 0.53
CLIP2-209ENST00000493166 CDC42BPGQ6DT37 1551 aa18.38■□□□□ 0.53
CLIP2-209ENST00000493166 WAPLQ7Z5K2 1190 aa18.37■□□□□ 0.53
CLIP2-209ENST00000493166 CLSPNQ9HAW4 1339 aa18.36■□□□□ 0.53
CLIP2-209ENST00000493166 SLAIN2Q9P270 581 aa18.36■□□□□ 0.53
CLIP2-209ENST00000493166 PLEKHH1Q9ULM0 1364 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms