RNA–Protein interactions for RNA: ENST00000492449.5

VPS8-225, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best)

Gene VPS8, Length 2,980 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-225ENST00000492449 PLXNC1O60486 1568 aa12.23□□□□□ -0.45
VPS8-225ENST00000492449 SASS6Q6UVJ0 657 aa12.23□□□□□ -0.45
VPS8-225ENST00000492449 NASPP49321 788 aaPredicted RBP12.22□□□□□ -0.45
VPS8-225ENST00000492449 CHMP4BQ9H444 224 aaKnown RBP12.22□□□□□ -0.45
VPS8-225ENST00000492449 PRDM10Q9NQV6 1147 aa12.22□□□□□ -0.45
VPS8-225ENST00000492449 CIZ1Q9ULV3 898 aaPredicted RBP12.22□□□□□ -0.45
VPS8-225ENST00000492449 IGHDP01880 384 aa12.22□□□□□ -0.45
VPS8-225ENST00000492449 FOXD1Q16676 465 aa12.22□□□□□ -0.45
VPS8-225ENST00000492449 ANP32BQ92688 251 aaKnown RBP12.21□□□□□ -0.45
VPS8-225ENST00000492449 ATP1B4Q9UN42 357 aaPredicted RBP12.21□□□□□ -0.45
VPS8-225ENST00000492449 PZPP20742 1482 aa12.21□□□□□ -0.45
VPS8-225ENST00000492449 PDLIM2Q96JY6 352 aa12.21□□□□□ -0.45
VPS8-225ENST00000492449 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.21□□□□□ -0.45
VPS8-225ENST00000492449 DNMT1P26358 1616 aaKnown RBP12.21□□□□□ -0.45
VPS8-225ENST00000492449 CADPSQ9ULU8 1353 aa12.21□□□□□ -0.46
VPS8-225ENST00000492449 MAGI3Q5TCQ9 1506 aa12.21□□□□□ -0.46
VPS8-225ENST00000492449 TRMT2AQ8IZ69 625 aaKnown RBP12.21□□□□□ -0.46
VPS8-225ENST00000492449 CUL7Q14999 1698 aa12.2□□□□□ -0.46
VPS8-225ENST00000492449 CGNL1Q0VF96 1302 aa12.2□□□□□ -0.46
VPS8-225ENST00000492449 VGFO15240 615 aaPredicted RBP12.2□□□□□ -0.46
VPS8-225ENST00000492449 POLR3GLQ9BT43 218 aa12.2□□□□□ -0.46
VPS8-225ENST00000492449 GBP4Q96PP9 640 aa12.19□□□□□ -0.46
VPS8-225ENST00000492449 ANKRD30AQ9BXX3 1397 aa12.19□□□□□ -0.46
VPS8-225ENST00000492449 PLEKHH1Q9ULM0 1364 aa12.19□□□□□ -0.46
VPS8-225ENST00000492449 KIAA1107Q9UPP5 1409 aa12.19□□□□□ -0.46
VPS8-225ENST00000492449 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
VPS8-225ENST00000492449 NKTRP30414 1462 aaKnown RBP12.18□□□□□ -0.46
VPS8-225ENST00000492449 P3H3Q8IVL6 736 aa12.18□□□□□ -0.46
VPS8-225ENST00000492449 CLEC17AQ6ZS10 378 aa12.18□□□□□ -0.46
VPS8-225ENST00000492449 ZKSCAN5Q9Y2L8 839 aa12.18□□□□□ -0.46
VPS8-225ENST00000492449 PDE3AQ14432 1141 aa12.17□□□□□ -0.46
VPS8-225ENST00000492449 RAB3GAP1Q15042 981 aa12.17□□□□□ -0.46
VPS8-225ENST00000492449 SMC5Q8IY18 1101 aa12.17□□□□□ -0.46
VPS8-225ENST00000492449 NESP48681 1621 aa12.17□□□□□ -0.46
VPS8-225ENST00000492449 TNPO1Q92973 898 aaKnown RBP12.17□□□□□ -0.46
VPS8-225ENST00000492449 CEP170Q5SW79 1584 aa12.16□□□□□ -0.46
VPS8-225ENST00000492449 SNX21Q969T3 373 aa12.16□□□□□ -0.46
VPS8-225ENST00000492449 LAMC1P11047 1609 aa12.16□□□□□ -0.46
VPS8-225ENST00000492449 HSP90AB1P08238 724 aaKnown RBP12.16□□□□□ -0.46
VPS8-225ENST00000492449 GTF2F1P35269 517 aaKnown RBP eCLIP12.16□□□□□ -0.46
VPS8-225ENST00000492449 ZNF445P59923 1031 aa12.16□□□□□ -0.46
VPS8-225ENST00000492449 GOLGA2Q08379 1002 aa12.16□□□□□ -0.46
VPS8-225ENST00000492449 SLFN5Q08AF3 891 aa12.16□□□□□ -0.46
VPS8-225ENST00000492449 CHIC2Q9UKJ5 165 aa12.16□□□□□ -0.46
VPS8-225ENST00000492449 CAMSAP2Q08AD1 1489 aa12.16□□□□□ -0.46
VPS8-225ENST00000492449 RBM25P49756 843 aaKnown RBP12.15□□□□□ -0.46
VPS8-225ENST00000492449 MYRIPQ8NFW9 859 aa12.15□□□□□ -0.46
VPS8-225ENST00000492449 CLUAP1Q96AJ1 413 aa12.15□□□□□ -0.46
VPS8-225ENST00000492449 DAPK1P53355 1430 aa12.15□□□□□ -0.46
VPS8-225ENST00000492449 ABCC2Q92887 1545 aa12.15□□□□□ -0.46
VPS8-225ENST00000492449 ADGBQ8N7X0 1667 aa12.15□□□□□ -0.47
VPS8-225ENST00000492449 HSCBQ8IWL3 235 aa12.14□□□□□ -0.47
VPS8-225ENST00000492449 C22orf23Q9BZE7 217 aa12.14□□□□□ -0.47
VPS8-225ENST00000492449 XPCQ01831 940 aaPredicted RBP12.14□□□□□ -0.47
VPS8-225ENST00000492449 SLC20A2Q08357 652 aa12.14□□□□□ -0.47
VPS8-225ENST00000492449 KLHL40Q2TBA0 621 aa12.14□□□□□ -0.47
VPS8-225ENST00000492449 ZNF830Q96NB3 372 aaPredicted RBP12.14□□□□□ -0.47
VPS8-225ENST00000492449 SPRYD3Q8NCJ5 442 aa12.13□□□□□ -0.47
VPS8-225ENST00000492449 PMFBP1Q8TBY8 1022 aa12.13□□□□□ -0.47
VPS8-225ENST00000492449 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
VPS8-225ENST00000492449 TRPM1Q7Z4N2 1603 aa12.13□□□□□ -0.47
VPS8-225ENST00000492449 COL17A1Q9UMD9 1497 aaPredicted RBP12.12□□□□□ -0.47
VPS8-225ENST00000492449 FTSJ3Q8IY81 847 aaKnown RBP12.12□□□□□ -0.47
VPS8-225ENST00000492449 PRIMPOLQ96LW4 560 aa12.12□□□□□ -0.47
VPS8-225ENST00000492449 CARD11Q9BXL7 1154 aa12.12□□□□□ -0.47
VPS8-225ENST00000492449 ST20-MTHFSA0A0A6YYL1 179 aa12.11□□□□□ -0.47
VPS8-225ENST00000492449 ZNF710Q8N1W2 664 aa12.11□□□□□ -0.47
VPS8-225ENST00000492449 CCDC39Q9UFE4 941 aa12.1□□□□□ -0.47
VPS8-225ENST00000492449 FANCD2Q9BXW9 1451 aa12.1□□□□□ -0.47
VPS8-225ENST00000492449 HMGN5P82970 282 aaKnown RBP12.1□□□□□ -0.47
VPS8-225ENST00000492449 FAM135AQ9P2D6 1515 aa12.1□□□□□ -0.47
VPS8-225ENST00000492449 ADAMTS8Q9UP79 889 aa12.09□□□□□ -0.47
VPS8-225ENST00000492449 PANK3Q9H999 370 aa12.09□□□□□ -0.47
VPS8-225ENST00000492449 ITSN2Q9NZM3 1697 aa12.09□□□□□ -0.47
VPS8-225ENST00000492449 KIAA0586Q9BVV6 1533 aa12.09□□□□□ -0.47
VPS8-225ENST00000492449 ABCC5O15440 1437 aa12.09□□□□□ -0.47
VPS8-225ENST00000492449 ATP2B3Q16720 1220 aa12.08□□□□□ -0.48
VPS8-225ENST00000492449 CBX1P83916 185 aa12.07□□□□□ -0.48
VPS8-225ENST00000492449 ARID3AQ99856 593 aa12.07□□□□□ -0.48
VPS8-225ENST00000492449 GOLGA6L22H0YM25 854 aa12.07□□□□□ -0.48
VPS8-225ENST00000492449 CHRM1P11229 460 aaPredicted RBP12.07□□□□□ -0.48
VPS8-225ENST00000492449 PDZRN3Q9UPQ7 1066 aa12.07□□□□□ -0.48
VPS8-225ENST00000492449 BCAR3O75815 825 aa12.06□□□□□ -0.48
VPS8-225ENST00000492449 CROCC2H7BZ55 1655 aa12.06□□□□□ -0.48
VPS8-225ENST00000492449 NBPF1Q3BBV0 1214 aa12.06□□□□□ -0.48
VPS8-225ENST00000492449 PAXIP1Q6ZW49 1069 aaPredicted RBP12.06□□□□□ -0.48
VPS8-225ENST00000492449 NGEFQ8N5V2 710 aa12.05□□□□□ -0.48
VPS8-225ENST00000492449 PRDM15P57071 1507 aaPredicted RBP12.05□□□□□ -0.48
VPS8-225ENST00000492449 E9PSI1 815 aa12.05□□□□□ -0.48
VPS8-225ENST00000492449 EIF4G3O43432 1585 aaKnown RBP12.05□□□□□ -0.48
VPS8-225ENST00000492449 KDM5DQ9BY66 1539 aa12.04□□□□□ -0.48
VPS8-225ENST00000492449 TEX2Q8IWB9 1127 aa12.04□□□□□ -0.48
VPS8-225ENST00000492449 RBSNQ9H1K0 784 aa12.04□□□□□ -0.48
VPS8-225ENST00000492449 PIK3C2GO75747 1445 aa12.04□□□□□ -0.48
VPS8-225ENST00000492449 ADGRL2O95490 1459 aa12.04□□□□□ -0.48
VPS8-225ENST00000492449 KIAA2012Q0VF49 1180 aa12.03□□□□□ -0.48
VPS8-225ENST00000492449 ZSCAN23Q3MJ62 389 aa12.03□□□□□ -0.48
VPS8-225ENST00000492449 DDX49Q9Y6V7 483 aaKnown RBP12.03□□□□□ -0.48
VPS8-225ENST00000492449 GPRASP1Q5JY77 1395 aa12.03□□□□□ -0.48
VPS8-225ENST00000492449 POLA1P09884 1462 aaPredicted RBP12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms