RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 KIF3BO15066 747 aa25.44■■□□□ 1.66
SNAPC3-206ENST00000490969 MAP3K4Q9Y6R4 1608 aa25.43■■□□□ 1.66
SNAPC3-206ENST00000490969 PARD3Q8TEW0 1356 aa25.43■■□□□ 1.66
SNAPC3-206ENST00000490969 CRBNQ96SW2 442 aa25.43■■□□□ 1.66
SNAPC3-206ENST00000490969 CFAP74Q9C0B2 1584 aa25.38■■□□□ 1.65
SNAPC3-206ENST00000490969 DIP2BQ9P265 1576 aa25.38■■□□□ 1.65
SNAPC3-206ENST00000490969 FRAT1Q92837 279 aaPredicted RBP25.37■■□□□ 1.65
SNAPC3-206ENST00000490969 TSPOAP1O95153 1857 aa25.37■■□□□ 1.65
SNAPC3-206ENST00000490969 NEO1Q92859 1461 aa25.36■■□□□ 1.65
SNAPC3-206ENST00000490969 SLC4A3P48751 1232 aa25.36■■□□□ 1.65
SNAPC3-206ENST00000490969 KDM2AQ9Y2K7 1162 aa25.36■■□□□ 1.65
SNAPC3-206ENST00000490969 DAXXQ9UER7 740 aaPredicted RBP25.35■■□□□ 1.65
SNAPC3-206ENST00000490969 DEPDC5O75140 1603 aa25.34■■□□□ 1.65
SNAPC3-206ENST00000490969 GLI2P10070 1586 aa25.34■■□□□ 1.65
SNAPC3-206ENST00000490969 RGL3Q3MIN7 710 aa25.34■■□□□ 1.65
SNAPC3-206ENST00000490969 BLMP54132 1417 aaPredicted RBP25.34■■□□□ 1.65
SNAPC3-206ENST00000490969 MROH1Q8NDA8 1641 aa25.34■■□□□ 1.65
SNAPC3-206ENST00000490969 INSRP06213 1382 aa25.33■■□□□ 1.64
SNAPC3-206ENST00000490969 KDM2BQ8NHM5 1336 aa25.32■■□□□ 1.64
SNAPC3-206ENST00000490969 CCDC144AA2RUR9 1427 aa25.32■■□□□ 1.64
SNAPC3-206ENST00000490969 FRMPD1Q5SYB0 1578 aa25.32■■□□□ 1.64
SNAPC3-206ENST00000490969 MLH3Q9UHC1 1453 aa25.32■■□□□ 1.64
SNAPC3-206ENST00000490969 DCAF11Q8TEB1 546 aa25.31■■□□□ 1.64
SNAPC3-206ENST00000490969 A2MP01023 1474 aa25.31■■□□□ 1.64
SNAPC3-206ENST00000490969 HECW2Q9P2P5 1572 aa25.31■■□□□ 1.64
SNAPC3-206ENST00000490969 ZMYM4Q5VZL5 1548 aa25.31■■□□□ 1.64
SNAPC3-206ENST00000490969 ABCA6Q8N139 1617 aa25.3■■□□□ 1.64
SNAPC3-206ENST00000490969 PER1O15534 1290 aaPredicted RBP25.29■■□□□ 1.64
SNAPC3-206ENST00000490969 RICTORQ6R327 1708 aa25.28■■□□□ 1.64
SNAPC3-206ENST00000490969 C20orf194Q5TEA3 1177 aa25.28■■□□□ 1.64
SNAPC3-206ENST00000490969 PPRC1Q5VV67 1664 aaKnown RBP25.28■■□□□ 1.64
SNAPC3-206ENST00000490969 VWDEQ8N2E2 1590 aa25.27■■□□□ 1.64
SNAPC3-206ENST00000490969 CENPQQ7L2Z9 268 aaPredicted RBP25.27■■□□□ 1.64
SNAPC3-206ENST00000490969 YEATS2Q9ULM3 1422 aa25.26■■□□□ 1.63
SNAPC3-206ENST00000490969 FAM161AQ3B820 660 aa25.26■■□□□ 1.63
SNAPC3-206ENST00000490969 UBE2Q2Q8WVN8 375 aa25.26■■□□□ 1.63
SNAPC3-206ENST00000490969 GGT6Q6P531 493 aa25.25■■□□□ 1.63
SNAPC3-206ENST00000490969 ATP10AO60312 1499 aa25.25■■□□□ 1.63
SNAPC3-206ENST00000490969 EIF2AK4Q9P2K8 1649 aaKnown RBP25.25■■□□□ 1.63
SNAPC3-206ENST00000490969 PRDM15P57071 1507 aaPredicted RBP25.24■■□□□ 1.63
SNAPC3-206ENST00000490969 C8orf34Q49A92 452 aa25.24■■□□□ 1.63
SNAPC3-206ENST00000490969 CC2D1BQ5T0F9 858 aaKnown RBP25.21■■□□□ 1.63
SNAPC3-206ENST00000490969 TET3O43151 1660 aa25.21■■□□□ 1.63
SNAPC3-206ENST00000490969 KANK1Q14678 1352 aa25.2■■□□□ 1.63
SNAPC3-206ENST00000490969 FRAT2O75474 233 aaPredicted RBP25.2■■□□□ 1.62
SNAPC3-206ENST00000490969 DIP2CQ9Y2E4 1556 aa25.2■■□□□ 1.62
SNAPC3-206ENST00000490969 KIF13AQ9H1H9 1805 aa25.2■■□□□ 1.62
SNAPC3-206ENST00000490969 TRPM1Q7Z4N2 1603 aa25.18■■□□□ 1.62
SNAPC3-206ENST00000490969 CEP152O94986 1710 aa25.18■■□□□ 1.62
SNAPC3-206ENST00000490969 CFAP65Q6ZU64 1925 aaKnown RBP25.18■■□□□ 1.62
SNAPC3-206ENST00000490969 UGGT1Q9NYU2 1555 aa25.17■■□□□ 1.62
SNAPC3-206ENST00000490969 EIF5BO60841 1220 aaKnown RBP25.17■■□□□ 1.62
SNAPC3-206ENST00000490969 PTPRTO14522 1441 aa25.17■■□□□ 1.62
SNAPC3-206ENST00000490969 COL17A1Q9UMD9 1497 aaPredicted RBP25.16■■□□□ 1.62
SNAPC3-206ENST00000490969 PRAG1Q86YV5 1406 aa25.16■■□□□ 1.62
SNAPC3-206ENST00000490969 SPHKAPQ2M3C7 1700 aa25.16■■□□□ 1.62
SNAPC3-206ENST00000490969 RNF17Q9BXT8 1623 aaKnown RBP25.15■■□□□ 1.62
SNAPC3-206ENST00000490969 CLTCL1P53675 1640 aa25.15■■□□□ 1.62
SNAPC3-206ENST00000490969 TRPM2O94759 1503 aa25.13■■□□□ 1.61
SNAPC3-206ENST00000490969 NBPF1Q3BBV0 1214 aa25.13■■□□□ 1.61
SNAPC3-206ENST00000490969 FAM43AQ8N2R8 423 aa25.13■■□□□ 1.61
SNAPC3-206ENST00000490969 PANK3Q9H999 370 aa25.11■■□□□ 1.61
SNAPC3-206ENST00000490969 EFCAB6Q5THR3 1501 aa25.11■■□□□ 1.61
SNAPC3-206ENST00000490969 DISP3Q9P2K9 1392 aa25.11■■□□□ 1.61
SNAPC3-206ENST00000490969 DUSP27Q5VZP5 1158 aa25.1■■□□□ 1.61
SNAPC3-206ENST00000490969 ADAMTS8Q9UP79 889 aa25.1■■□□□ 1.61
SNAPC3-206ENST00000490969 GPRASP1Q5JY77 1395 aa25.09■■□□□ 1.61
SNAPC3-206ENST00000490969 RGS3P49796 1198 aa25.09■■□□□ 1.61
SNAPC3-206ENST00000490969 RSPH6AQ9H0K4 717 aa25.09■■□□□ 1.61
SNAPC3-206ENST00000490969 TESK2Q96S53 571 aa25.08■■□□□ 1.6
SNAPC3-206ENST00000490969 PLEKHH1Q9ULM0 1364 aa25.07■■□□□ 1.6
SNAPC3-206ENST00000490969 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.07■■□□□ 1.6
SNAPC3-206ENST00000490969 NPATQ14207 1427 aa25.07■■□□□ 1.6
SNAPC3-206ENST00000490969 LMTK2Q8IWU2 1503 aa25.06■■□□□ 1.6
SNAPC3-206ENST00000490969 ABCC3O15438 1527 aa25.05■■□□□ 1.6
SNAPC3-206ENST00000490969 LAMC1P11047 1609 aa25.04■■□□□ 1.6
SNAPC3-206ENST00000490969 ZNF521Q96K83 1311 aa25.02■■□□□ 1.6
SNAPC3-206ENST00000490969 GOLGA2Q08379 1002 aa25.02■■□□□ 1.6
SNAPC3-206ENST00000490969 SIGLEC1Q9BZZ2 1709 aa25.01■■□□□ 1.59
SNAPC3-206ENST00000490969 VIRMAQ69YN4 1812 aaKnown RBP24.99■■□□□ 1.59
SNAPC3-206ENST00000490969 TMF1P82094 1093 aa24.99■■□□□ 1.59
SNAPC3-206ENST00000490969 WDR43Q15061 677 aaKnown RBP eCLIP24.99■■□□□ 1.59
SNAPC3-206ENST00000490969 EIF3AQ14152 1382 aaKnown RBP24.97■■□□□ 1.59
SNAPC3-206ENST00000490969 USP19O94966 1318 aa24.96■■□□□ 1.59
SNAPC3-206ENST00000490969 CAMSAP1Q5T5Y3 1602 aa24.96■■□□□ 1.59
SNAPC3-206ENST00000490969 POGKQ9P215 609 aa24.95■■□□□ 1.59
SNAPC3-206ENST00000490969 MROH2AA6NES4 1674 aa24.95■■□□□ 1.59
SNAPC3-206ENST00000490969 SLFN5Q08AF3 891 aa24.95■■□□□ 1.58
SNAPC3-206ENST00000490969 PPP2R1AP30153 589 aa24.94■■□□□ 1.58
SNAPC3-206ENST00000490969 CHGAP10645 457 aaKnown RBP24.94■■□□□ 1.58
SNAPC3-206ENST00000490969 MADDQ8WXG6 1647 aa24.92■■□□□ 1.58
SNAPC3-206ENST00000490969 MLECQ14165 292 aa24.91■■□□□ 1.58
SNAPC3-206ENST00000490969 ADGRF5Q8IZF2 1346 aa24.91■■□□□ 1.58
SNAPC3-206ENST00000490969 KIF1BO60333 1816 aa24.9■■□□□ 1.58
SNAPC3-206ENST00000490969 TRMT2AQ8IZ69 625 aaKnown RBP24.89■■□□□ 1.58
SNAPC3-206ENST00000490969 BECN1Q14457 450 aa24.89■■□□□ 1.57
SNAPC3-206ENST00000490969 FBXO31Q5XUX0 539 aaPredicted RBP24.88■■□□□ 1.57
SNAPC3-206ENST00000490969 KNSTRNQ9Y448 316 aa24.88■■□□□ 1.57
SNAPC3-206ENST00000490969 SYNMO15061 1565 aa24.87■■□□□ 1.57
SNAPC3-206ENST00000490969 NOS1P29475 1434 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms