RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 SOX12O15370 315 aa7.91□□□□□ -1.14
PTPRK-213ENST00000490332 PKD2Q13563 968 aa7.91□□□□□ -1.14
PTPRK-213ENST00000490332 POTEAQ6S8J7 498 aa7.91□□□□□ -1.14
PTPRK-213ENST00000490332 UPF1Q92900 1129 aaKnown RBP eCLIP7.91□□□□□ -1.14
PTPRK-213ENST00000490332 TRAPPC8Q9Y2L5 1435 aa7.91□□□□□ -1.14
PTPRK-213ENST00000490332 CFAP74Q9C0B2 1584 aa7.91□□□□□ -1.14
PTPRK-213ENST00000490332 IGF1RP08069 1367 aa7.9□□□□□ -1.14
PTPRK-213ENST00000490332 IFFO2Q5TF58 517 aa7.9□□□□□ -1.14
PTPRK-213ENST00000490332 POTEEQ6S8J3 1075 aa7.9□□□□□ -1.14
PTPRK-213ENST00000490332 PHF8Q9UPP1 1060 aa7.9□□□□□ -1.14
PTPRK-213ENST00000490332 ABCA8O94911 1581 aa7.89□□□□□ -1.15
PTPRK-213ENST00000490332 PLA2R1Q13018 1463 aa7.88□□□□□ -1.15
PTPRK-213ENST00000490332 C9orf84Q5VXU9 1444 aa7.88□□□□□ -1.15
PTPRK-213ENST00000490332 C3P01024 1663 aa7.88□□□□□ -1.15
PTPRK-213ENST00000490332 ZEB1P37275 1124 aaPredicted RBP7.87□□□□□ -1.15
PTPRK-213ENST00000490332 PLA2G2EQ9NZK7 142 aa7.87□□□□□ -1.15
PTPRK-213ENST00000490332 ATP10AO60312 1499 aa7.87□□□□□ -1.15
PTPRK-213ENST00000490332 FAM9AQ8IZU1 332 aaPredicted RBP7.86□□□□□ -1.15
PTPRK-213ENST00000490332 RNF25Q96BH1 459 aaPredicted RBP7.86□□□□□ -1.15
PTPRK-213ENST00000490332 EEA1Q15075 1411 aa7.86□□□□□ -1.15
PTPRK-213ENST00000490332 NCKAP5LQ9HCH0 1330 aa7.85□□□□□ -1.15
PTPRK-213ENST00000490332 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP7.85□□□□□ -1.15
PTPRK-213ENST00000490332 ZFP91Q96JP5 570 aaPredicted RBP7.85□□□□□ -1.15
PTPRK-213ENST00000490332 TCOF1Q13428 1488 aaKnown RBP7.85□□□□□ -1.15
PTPRK-213ENST00000490332 KIF27Q86VH2 1401 aa7.85□□□□□ -1.15
PTPRK-213ENST00000490332 HECW1Q76N89 1606 aa7.85□□□□□ -1.15
PTPRK-213ENST00000490332 CARMIL1Q5VZK9 1371 aa7.84□□□□□ -1.15
PTPRK-213ENST00000490332 AXIN2Q9Y2T1 843 aa7.84□□□□□ -1.15
PTPRK-213ENST00000490332 ALKQ9UM73 1620 aa7.84□□□□□ -1.15
PTPRK-213ENST00000490332 NPATQ14207 1427 aa7.84□□□□□ -1.15
PTPRK-213ENST00000490332 SUPT6HQ7KZ85 1726 aaKnown RBP7.83□□□□□ -1.16
PTPRK-213ENST00000490332 RAPGEF2Q9Y4G8 1499 aa7.83□□□□□ -1.16
PTPRK-213ENST00000490332 KIF3CO14782 793 aa7.83□□□□□ -1.16
PTPRK-213ENST00000490332 NUDT7P0C024 238 aa7.83□□□□□ -1.16
PTPRK-213ENST00000490332 PBX2P40425 430 aa7.83□□□□□ -1.16
PTPRK-213ENST00000490332 ESF1Q9H501 851 aaKnown RBP7.83□□□□□ -1.16
PTPRK-213ENST00000490332 ZNF142P52746 1687 aaPredicted RBP7.83□□□□□ -1.16
PTPRK-213ENST00000490332 GOLGA3Q08378 1498 aa7.82□□□□□ -1.16
PTPRK-213ENST00000490332 SHANK2Q9UPX8 1470 aa7.82□□□□□ -1.16
PTPRK-213ENST00000490332 RIOK3O14730 519 aaKnown RBP7.82□□□□□ -1.16
PTPRK-213ENST00000490332 CNTLNQ9NXG0 1405 aa7.82□□□□□ -1.16
PTPRK-213ENST00000490332 HCSTQ9UBK5 93 aa7.82□□□□□ -1.16
PTPRK-213ENST00000490332 FBXO22Q8NEZ5 403 aa7.81□□□□□ -1.16
PTPRK-213ENST00000490332 LHX6Q9UPM6 363 aa7.81□□□□□ -1.16
PTPRK-213ENST00000490332 ATP10BO94823 1461 aa7.8□□□□□ -1.16
PTPRK-213ENST00000490332 AGLP35573 1532 aa7.79□□□□□ -1.16
PTPRK-213ENST00000490332 RNF17Q9BXT8 1623 aaKnown RBP7.79□□□□□ -1.16
PTPRK-213ENST00000490332 C2orf72A6NCS6 295 aa7.78□□□□□ -1.16
PTPRK-213ENST00000490332 VGFO15240 615 aaPredicted RBP7.78□□□□□ -1.16
PTPRK-213ENST00000490332 REREQ9P2R6 1566 aa7.78□□□□□ -1.16
PTPRK-213ENST00000490332 MROH2AA6NES4 1674 aa7.77□□□□□ -1.17
PTPRK-213ENST00000490332 NLRP6P59044 892 aa7.77□□□□□ -1.17
PTPRK-213ENST00000490332 ADGRD1Q6QNK2 874 aa7.77□□□□□ -1.17
PTPRK-213ENST00000490332 PCDHGA4Q9Y5G9 962 aa7.77□□□□□ -1.17
PTPRK-213ENST00000490332 CEP170BQ9Y4F5 1589 aaPredicted RBP7.76□□□□□ -1.17
PTPRK-213ENST00000490332 POLR1AO95602 1720 aaPredicted RBP7.76□□□□□ -1.17
PTPRK-213ENST00000490332 SLC34A2O95436 690 aa7.76□□□□□ -1.17
PTPRK-213ENST00000490332 RBM33Q96EV2 1170 aaKnown RBP7.76□□□□□ -1.17
PTPRK-213ENST00000490332 MYO3AQ8NEV4 1616 aa7.76□□□□□ -1.17
PTPRK-213ENST00000490332 LRRC7Q96NW7 1537 aa7.76□□□□□ -1.17
PTPRK-213ENST00000490332 CDK12Q9NYV4 1490 aaPredicted RBP7.75□□□□□ -1.17
PTPRK-213ENST00000490332 SYNMO15061 1565 aa7.75□□□□□ -1.17
PTPRK-213ENST00000490332 ZNF772Q68DY9 489 aaPredicted RBP7.74□□□□□ -1.17
PTPRK-213ENST00000490332 SCAPERQ9BY12 1400 aa7.74□□□□□ -1.17
PTPRK-213ENST00000490332 VWDEQ8N2E2 1590 aa7.73□□□□□ -1.17
PTPRK-213ENST00000490332 ARHGAP33O14559 1287 aa7.73□□□□□ -1.17
PTPRK-213ENST00000490332 HRO43593 1189 aa7.73□□□□□ -1.17
PTPRK-213ENST00000490332 TRIM52Q96A61 297 aa7.73□□□□□ -1.17
PTPRK-213ENST00000490332 MFRPQ9BY79 579 aa7.73□□□□□ -1.17
PTPRK-213ENST00000490332 ARID3CA6NKF2 412 aa7.72□□□□□ -1.17
PTPRK-213ENST00000490332 ZNF518AQ6AHZ1 1483 aa7.72□□□□□ -1.17
PTPRK-213ENST00000490332 FAM135BQ49AJ0 1406 aa7.71□□□□□ -1.17
PTPRK-213ENST00000490332 DMRTA1Q5VZB9 504 aa7.71□□□□□ -1.18
PTPRK-213ENST00000490332 CTTNBP2Q8WZ74 1663 aa7.7□□□□□ -1.18
PTPRK-213ENST00000490332 UBTFP17480 764 aaKnown RBP7.7□□□□□ -1.18
PTPRK-213ENST00000490332 BCL11BQ9C0K0 894 aaPredicted RBP7.7□□□□□ -1.18
PTPRK-213ENST00000490332 NEURL4Q96JN8 1562 aa7.7□□□□□ -1.18
PTPRK-213ENST00000490332 DIP2CQ9Y2E4 1556 aa7.7□□□□□ -1.18
PTPRK-213ENST00000490332 SETBP1Q9Y6X0 1596 aa7.7□□□□□ -1.18
PTPRK-213ENST00000490332 CDK13Q14004 1512 aaKnown RBP7.69□□□□□ -1.18
PTPRK-213ENST00000490332 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.69□□□□□ -1.18
PTPRK-213ENST00000490332 KDM5CP41229 1560 aa7.69□□□□□ -1.18
PTPRK-213ENST00000490332 TK2O00142 265 aa7.69□□□□□ -1.18
PTPRK-213ENST00000490332 RXRBP28702 533 aa7.69□□□□□ -1.18
PTPRK-213ENST00000490332 LRP5O75197 1615 aa7.69□□□□□ -1.18
PTPRK-213ENST00000490332 ZMYM3Q14202 1370 aa7.69□□□□□ -1.18
PTPRK-213ENST00000490332 A2ML1A8K2U0 1454 aa7.68□□□□□ -1.18
PTPRK-213ENST00000490332 DNMT1P26358 1616 aaKnown RBP7.67□□□□□ -1.18
PTPRK-213ENST00000490332 RAPGEF6Q8TEU7 1601 aa7.67□□□□□ -1.18
PTPRK-213ENST00000490332 PLEKHD1A6NEE1 506 aa7.67□□□□□ -1.18
PTPRK-213ENST00000490332 PSEN2P49810 448 aa7.67□□□□□ -1.18
PTPRK-213ENST00000490332 JCADQ9P266 1359 aa7.67□□□□□ -1.18
PTPRK-213ENST00000490332 CEP162Q5TB80 1403 aa7.67□□□□□ -1.18
PTPRK-213ENST00000490332 KCTD12Q96CX2 325 aaKnown RBP7.66□□□□□ -1.18
PTPRK-213ENST00000490332 PSDA5PKW4 1024 aaPredicted RBP7.65□□□□□ -1.18
PTPRK-213ENST00000490332 MED14O60244 1454 aa7.65□□□□□ -1.18
PTPRK-213ENST00000490332 PLCH2O75038 1416 aa7.65□□□□□ -1.18
PTPRK-213ENST00000490332 DEPDC5O75140 1603 aa7.65□□□□□ -1.18
PTPRK-213ENST00000490332 ANKLE2Q86XL3 938 aa7.65□□□□□ -1.18
PTPRK-213ENST00000490332 ABCA6Q8N139 1617 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms