RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 EID1Q9Y6B2 187 aa24.4■■□□□ 1.5
SFXN5-220ENST00000490056 ZFYVE9O95405 1425 aa24.39■■□□□ 1.5
SFXN5-220ENST00000490056 NEUROD1Q13562 356 aa24.38■■□□□ 1.49
SFXN5-220ENST00000490056 SENP3Q9H4L4 574 aaPredicted RBP24.38■■□□□ 1.49
SFXN5-220ENST00000490056 SCAF11Q99590 1463 aaKnown RBP24.37■■□□□ 1.49
SFXN5-220ENST00000490056 POLR1AO95602 1720 aaPredicted RBP24.36■■□□□ 1.49
SFXN5-220ENST00000490056 NEURL4Q96JN8 1562 aa24.35■■□□□ 1.49
SFXN5-220ENST00000490056 PPP1R15AO75807 674 aaPredicted RBP24.35■■□□□ 1.49
SFXN5-220ENST00000490056 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.35■■□□□ 1.49
SFXN5-220ENST00000490056 NEXMIFQ5QGS0 1516 aa24.35■■□□□ 1.49
SFXN5-220ENST00000490056 HDGFP51858 240 aaKnown RBP24.34■■□□□ 1.49
SFXN5-220ENST00000490056 CCER1Q8TC90 406 aaPredicted RBP24.34■■□□□ 1.49
SFXN5-220ENST00000490056 RPGRIP1LQ68CZ1 1315 aa24.33■■□□□ 1.48
SFXN5-220ENST00000490056 NPHP4O75161 1426 aaPredicted RBP24.31■■□□□ 1.48
SFXN5-220ENST00000490056 PPLO60437 1756 aa24.3■■□□□ 1.48
SFXN5-220ENST00000490056 MED14O60244 1454 aa24.3■■□□□ 1.48
SFXN5-220ENST00000490056 BCANQ96GW7 911 aa24.29■■□□□ 1.48
SFXN5-220ENST00000490056 DMRT2Q9Y5R5 561 aa24.28■■□□□ 1.48
SFXN5-220ENST00000490056 VGFO15240 615 aaPredicted RBP24.27■■□□□ 1.48
SFXN5-220ENST00000490056 IQGAP1P46940 1657 aa24.27■■□□□ 1.48
SFXN5-220ENST00000490056 PLEKHG1Q9ULL1 1385 aa24.27■■□□□ 1.48
SFXN5-220ENST00000490056 DCAF11Q8TEB1 546 aa24.26■■□□□ 1.47
SFXN5-220ENST00000490056 KDM2AQ9Y2K7 1162 aa24.26■■□□□ 1.47
SFXN5-220ENST00000490056 IFT172Q9UG01 1749 aa24.26■■□□□ 1.47
SFXN5-220ENST00000490056 ADGRF5Q8IZF2 1346 aa24.25■■□□□ 1.47
SFXN5-220ENST00000490056 SLC26A8Q96RN1 970 aa24.24■■□□□ 1.47
SFXN5-220ENST00000490056 L3MBTL2Q969R5 705 aa24.23■■□□□ 1.47
SFXN5-220ENST00000490056 CLSPNQ9HAW4 1339 aa24.23■■□□□ 1.47
SFXN5-220ENST00000490056 ADAMTS13Q76LX8 1427 aa24.18■■□□□ 1.46
SFXN5-220ENST00000490056 NRXN3Q9Y4C0 1643 aa24.18■■□□□ 1.46
SFXN5-220ENST00000490056 MYOM2P54296 1465 aa24.17■■□□□ 1.46
SFXN5-220ENST00000490056 SETBP1Q9Y6X0 1596 aa24.16■■□□□ 1.46
SFXN5-220ENST00000490056 TONSLQ96HA7 1378 aa24.16■■□□□ 1.46
SFXN5-220ENST00000490056 TBX22Q9Y458 520 aa24.15■■□□□ 1.46
SFXN5-220ENST00000490056 NRXN1Q9ULB1 1477 aa24.14■■□□□ 1.46
SFXN5-220ENST00000490056 ZNF335Q9H4Z2 1342 aaPredicted RBP24.13■■□□□ 1.45
SFXN5-220ENST00000490056 PIK3C2GO75747 1445 aa24.13■■□□□ 1.45
SFXN5-220ENST00000490056 STAC3Q96MF2 364 aa24.13■■□□□ 1.45
SFXN5-220ENST00000490056 ALKQ9UM73 1620 aa24.12■■□□□ 1.45
SFXN5-220ENST00000490056 CFAP70Q5T0N1 1121 aa24.1■■□□□ 1.45
SFXN5-220ENST00000490056 DIP2AQ14689 1571 aa24.1■■□□□ 1.45
SFXN5-220ENST00000490056 METP08581 1390 aa24.09■■□□□ 1.45
SFXN5-220ENST00000490056 C14orf93Q9H972 538 aaKnown RBP24.08■■□□□ 1.45
SFXN5-220ENST00000490056 SETD1AO15047 1707 aaKnown RBP24.07■■□□□ 1.44
SFXN5-220ENST00000490056 PRAG1Q86YV5 1406 aa24.06■■□□□ 1.44
SFXN5-220ENST00000490056 STRCP1A6NGW2 1772 aa24.06■■□□□ 1.44
SFXN5-220ENST00000490056 PTPRUQ92729 1446 aa24.05■■□□□ 1.44
SFXN5-220ENST00000490056 TMEM132EQ6IEE7 984 aa24.05■■□□□ 1.44
SFXN5-220ENST00000490056 KCNA6P17658 529 aa24.04■■□□□ 1.44
SFXN5-220ENST00000490056 CHD2O14647 1828 aaKnown RBP24.03■■□□□ 1.44
SFXN5-220ENST00000490056 NBPF8Q3BBV2 869 aa24.03■■□□□ 1.44
SFXN5-220ENST00000490056 AMOTL2Q9Y2J4 779 aa24.02■■□□□ 1.44
SFXN5-220ENST00000490056 PIK3R4Q99570 1358 aa24.02■■□□□ 1.44
SFXN5-220ENST00000490056 ASXL1Q8IXJ9 1541 aa24.01■■□□□ 1.43
SFXN5-220ENST00000490056 TIMELESSQ9UNS1 1208 aa24.01■■□□□ 1.43
SFXN5-220ENST00000490056 LTBP4Q8N2S1 1624 aa24.01■■□□□ 1.43
SFXN5-220ENST00000490056 LAMC1P11047 1609 aa23.99■■□□□ 1.43
SFXN5-220ENST00000490056 STK26Q9P289 416 aa23.99■■□□□ 1.43
SFXN5-220ENST00000490056 NBPF1Q3BBV0 1214 aa23.98■■□□□ 1.43
SFXN5-220ENST00000490056 NWD1Q149M9 1564 aa23.98■■□□□ 1.43
SFXN5-220ENST00000490056 PROSER2Q86WR7 435 aaPredicted RBP23.95■■□□□ 1.42
SFXN5-220ENST00000490056 RBM33Q96EV2 1170 aaKnown RBP23.95■■□□□ 1.42
SFXN5-220ENST00000490056 XRN1Q8IZH2 1706 aaKnown RBP23.95■■□□□ 1.42
SFXN5-220ENST00000490056 ADGRB1O14514 1584 aa23.95■■□□□ 1.42
SFXN5-220ENST00000490056 KIAA1210Q9ULL0 1709 aa23.94■■□□□ 1.42
SFXN5-220ENST00000490056 CPS1P31327 1500 aa23.94■■□□□ 1.42
SFXN5-220ENST00000490056 YTHDC2Q9H6S0 1430 aaKnown RBP23.93■■□□□ 1.42
SFXN5-220ENST00000490056 LRPPRCP42704 1394 aaKnown RBP23.93■■□□□ 1.42
SFXN5-220ENST00000490056 TRPM1Q7Z4N2 1603 aa23.93■■□□□ 1.42
SFXN5-220ENST00000490056 LRRC7Q96NW7 1537 aa23.92■■□□□ 1.42
SFXN5-220ENST00000490056 NKTRP30414 1462 aaKnown RBP23.91■■□□□ 1.42
SFXN5-220ENST00000490056 ROBO2Q9HCK4 1378 aa23.91■■□□□ 1.42
SFXN5-220ENST00000490056 TRAK1Q9UPV9 953 aa23.9■■□□□ 1.42
SFXN5-220ENST00000490056 ABCC11Q96J66 1382 aa23.9■■□□□ 1.42
SFXN5-220ENST00000490056 CERKQ8TCT0 537 aa23.89■■□□□ 1.41
SFXN5-220ENST00000490056 TMEM94Q12767 1356 aa23.89■■□□□ 1.41
SFXN5-220ENST00000490056 ROCK2O75116 1388 aaKnown RBP23.88■■□□□ 1.41
SFXN5-220ENST00000490056 TECPR2O15040 1411 aa23.86■■□□□ 1.41
SFXN5-220ENST00000490056 WAPLQ7Z5K2 1190 aa23.86■■□□□ 1.41
SFXN5-220ENST00000490056 XIRP1Q702N8 1843 aaKnown RBP23.86■■□□□ 1.41
SFXN5-220ENST00000490056 RALGAPBQ86X10 1494 aa23.86■■□□□ 1.41
SFXN5-220ENST00000490056 PTCH1Q13635 1447 aa23.84■■□□□ 1.41
SFXN5-220ENST00000490056 KNDC1Q76NI1 1749 aa23.84■■□□□ 1.41
SFXN5-220ENST00000490056 PLEKHH1Q9ULM0 1364 aa23.83■■□□□ 1.41
SFXN5-220ENST00000490056 PRAM1Q96QH2 718 aa23.82■■□□□ 1.4
SFXN5-220ENST00000490056 CARD11Q9BXL7 1154 aa23.82■■□□□ 1.4
SFXN5-220ENST00000490056 GPRASP1Q5JY77 1395 aa23.81■■□□□ 1.4
SFXN5-220ENST00000490056 SAFB2Q14151 953 aaKnown RBP eCLIP23.81■■□□□ 1.4
SFXN5-220ENST00000490056 C14orf37Q86TY3 774 aa23.81■■□□□ 1.4
SFXN5-220ENST00000490056 DLC1Q96QB1 1528 aa23.8■■□□□ 1.4
SFXN5-220ENST00000490056 SIRT1Q96EB6 747 aa23.8■■□□□ 1.4
SFXN5-220ENST00000490056 POGKQ9P215 609 aa23.8■■□□□ 1.4
SFXN5-220ENST00000490056 FAM135BQ49AJ0 1406 aa23.79■■□□□ 1.4
SFXN5-220ENST00000490056 ARHGEF28Q8N1W1 1705 aaKnown RBP23.78■■□□□ 1.4
SFXN5-220ENST00000490056 NCOA3Q9Y6Q9 1424 aa23.76■■□□□ 1.39
SFXN5-220ENST00000490056 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.75■■□□□ 1.39
SFXN5-220ENST00000490056 IQSEC2Q5JU85 1478 aa23.75■■□□□ 1.39
SFXN5-220ENST00000490056 C19orf44Q9H6X5 657 aa23.74■■□□□ 1.39
SFXN5-220ENST00000490056 MSH6P52701 1360 aa23.74■■□□□ 1.39
SFXN5-220ENST00000490056 NALCNQ8IZF0 1738 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms