RNA–Protein interactions for RNA: ENST00000489808.1

EPHB4-207, Transcript of EPH receptor B4, humanhuman

TSL 1 (best)

Gene EPHB4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-207ENST00000489808 BCANQ96GW7 911 aa28.48■■■□□ 2.15
EPHB4-207ENST00000489808 SLC26A8Q96RN1 970 aa28.48■■■□□ 2.15
EPHB4-207ENST00000489808 FOXD1Q16676 465 aa28.46■■■□□ 2.15
EPHB4-207ENST00000489808 NUTM2DQ5VT03 806 aaPredicted RBP28.45■■■□□ 2.14
EPHB4-207ENST00000489808 CPS1P31327 1500 aa28.44■■■□□ 2.14
EPHB4-207ENST00000489808 PLEKHG1Q9ULL1 1385 aa28.43■■■□□ 2.14
EPHB4-207ENST00000489808 RAB3GAP2Q9H2M9 1393 aa28.42■■■□□ 2.14
EPHB4-207ENST00000489808 ZNF326Q5BKZ1 582 aaKnown RBP28.42■■■□□ 2.14
EPHB4-207ENST00000489808 SENP3Q9H4L4 574 aaPredicted RBP28.42■■■□□ 2.14
EPHB4-207ENST00000489808 SPHKAPQ2M3C7 1700 aa28.41■■■□□ 2.14
EPHB4-207ENST00000489808 TRPM2O94759 1503 aa28.41■■■□□ 2.14
EPHB4-207ENST00000489808 KCNA6P17658 529 aa28.39■■■□□ 2.14
EPHB4-207ENST00000489808 HRCP23327 699 aa28.39■■■□□ 2.14
EPHB4-207ENST00000489808 UBAP1LF5GYI3 381 aa28.38■■■□□ 2.13
EPHB4-207ENST00000489808 TBX22Q9Y458 520 aa28.38■■■□□ 2.13
EPHB4-207ENST00000489808 MYO5BQ9ULV0 1848 aa28.36■■■□□ 2.13
EPHB4-207ENST00000489808 CLTCL1P53675 1640 aa28.33■■■□□ 2.13
EPHB4-207ENST00000489808 LRRC7Q96NW7 1537 aa28.33■■■□□ 2.13
EPHB4-207ENST00000489808 ADAMTS13Q76LX8 1427 aa28.29■■■□□ 2.12
EPHB4-207ENST00000489808 TOM1O60784 492 aa28.29■■■□□ 2.12
EPHB4-207ENST00000489808 STRCP1A6NGW2 1772 aa28.29■■■□□ 2.12
EPHB4-207ENST00000489808 RPGRIP1LQ68CZ1 1315 aa28.28■■■□□ 2.12
EPHB4-207ENST00000489808 PROSER2Q86WR7 435 aaPredicted RBP28.27■■■□□ 2.12
EPHB4-207ENST00000489808 CCDC144AA2RUR9 1427 aa28.26■■■□□ 2.12
EPHB4-207ENST00000489808 VGFO15240 615 aaPredicted RBP28.25■■■□□ 2.11
EPHB4-207ENST00000489808 PIK3R4Q99570 1358 aa28.22■■■□□ 2.11
EPHB4-207ENST00000489808 RGL3Q3MIN7 710 aa28.21■■■□□ 2.11
EPHB4-207ENST00000489808 TMEM94Q12767 1356 aa28.21■■■□□ 2.11
EPHB4-207ENST00000489808 NEXMIFQ5QGS0 1516 aa28.2■■■□□ 2.1
EPHB4-207ENST00000489808 PIP4K2BP78356 416 aa28.2■■■□□ 2.1
EPHB4-207ENST00000489808 RBM33Q96EV2 1170 aaKnown RBP28.2■■■□□ 2.1
EPHB4-207ENST00000489808 KIF1BO60333 1816 aa28.18■■■□□ 2.1
EPHB4-207ENST00000489808 AMOTL2Q9Y2J4 779 aa28.17■■■□□ 2.1
EPHB4-207ENST00000489808 SPATA31E1Q6ZUB1 1445 aa28.16■■■□□ 2.1
EPHB4-207ENST00000489808 SCAF1Q9H7N4 1312 aaKnown RBP28.16■■■□□ 2.1
EPHB4-207ENST00000489808 DIP2AQ14689 1571 aa28.15■■■□□ 2.1
EPHB4-207ENST00000489808 NKTRP30414 1462 aaKnown RBP28.15■■■□□ 2.1
EPHB4-207ENST00000489808 NWD1Q149M9 1564 aa28.14■■■□□ 2.1
EPHB4-207ENST00000489808 SETBP1Q9Y6X0 1596 aa28.14■■■□□ 2.1
EPHB4-207ENST00000489808 ANKRD30BQ9BXX2 1392 aa28.13■■■□□ 2.09
EPHB4-207ENST00000489808 METP08581 1390 aa28.12■■■□□ 2.09
EPHB4-207ENST00000489808 PTPRUQ92729 1446 aa28.12■■■□□ 2.09
EPHB4-207ENST00000489808 CHD2O14647 1828 aaKnown RBP28.1■■■□□ 2.09
EPHB4-207ENST00000489808 NRXN3Q9Y4C0 1643 aa28.09■■■□□ 2.09
EPHB4-207ENST00000489808 ADGRF5Q8IZF2 1346 aa28.09■■■□□ 2.09
EPHB4-207ENST00000489808 ALKQ9UM73 1620 aa28.08■■■□□ 2.09
EPHB4-207ENST00000489808 NCOA3Q9Y6Q9 1424 aa28.06■■■□□ 2.08
EPHB4-207ENST00000489808 MSH6P52701 1360 aa28.04■■■□□ 2.08
EPHB4-207ENST00000489808 HSPA1LP34931 641 aa28.04■■■□□ 2.08
EPHB4-207ENST00000489808 C14orf37Q86TY3 774 aa28.03■■■□□ 2.08
EPHB4-207ENST00000489808 XIRP1Q702N8 1843 aaKnown RBP28.03■■■□□ 2.08
EPHB4-207ENST00000489808 C19orf44Q9H6X5 657 aa28.02■■■□□ 2.08
EPHB4-207ENST00000489808 PPLO60437 1756 aa27.99■■■□□ 2.07
EPHB4-207ENST00000489808 TRIM26Q12899 539 aaPredicted RBP27.98■■■□□ 2.07
EPHB4-207ENST00000489808 SLAIN2Q9P270 581 aa27.98■■■□□ 2.07
EPHB4-207ENST00000489808 FAM135BQ49AJ0 1406 aa27.95■■■□□ 2.07
EPHB4-207ENST00000489808 ATF3P18847 181 aa27.94■■■□□ 2.06
EPHB4-207ENST00000489808 CADPS2Q86UW7 1296 aa27.94■■■□□ 2.06
EPHB4-207ENST00000489808 C14orf93Q9H972 538 aaKnown RBP27.93■■■□□ 2.06
EPHB4-207ENST00000489808 TMEM132EQ6IEE7 984 aa27.91■■■□□ 2.06
EPHB4-207ENST00000489808 XRN1Q8IZH2 1706 aaKnown RBP27.91■■■□□ 2.06
EPHB4-207ENST00000489808 PIK3C2GO75747 1445 aa27.91■■■□□ 2.06
EPHB4-207ENST00000489808 DCAF11Q8TEB1 546 aa27.9■■■□□ 2.06
EPHB4-207ENST00000489808 STAC3Q96MF2 364 aa27.9■■■□□ 2.06
EPHB4-207ENST00000489808 ROBO2Q9HCK4 1378 aa27.89■■■□□ 2.06
EPHB4-207ENST00000489808 KDM2AQ9Y2K7 1162 aa27.89■■■□□ 2.06
EPHB4-207ENST00000489808 CFAP70Q5T0N1 1121 aa27.88■■■□□ 2.05
EPHB4-207ENST00000489808 STK26Q9P289 416 aa27.87■■■□□ 2.05
EPHB4-207ENST00000489808 NRXN1Q9ULB1 1477 aa27.87■■■□□ 2.05
EPHB4-207ENST00000489808 MYOM2P54296 1465 aa27.86■■■□□ 2.05
EPHB4-207ENST00000489808 SETD1AO15047 1707 aaKnown RBP27.86■■■□□ 2.05
EPHB4-207ENST00000489808 IFT172Q9UG01 1749 aa27.86■■■□□ 2.05
EPHB4-207ENST00000489808 PTCH1Q13635 1447 aa27.85■■■□□ 2.05
EPHB4-207ENST00000489808 DHX57Q6P158 1386 aaKnown RBP27.85■■■□□ 2.05
EPHB4-207ENST00000489808 PRAG1Q86YV5 1406 aa27.84■■■□□ 2.05
EPHB4-207ENST00000489808 LRPPRCP42704 1394 aaKnown RBP27.84■■■□□ 2.05
EPHB4-207ENST00000489808 ABCC11Q96J66 1382 aa27.83■■■□□ 2.05
EPHB4-207ENST00000489808 DCCP43146 1447 aa27.82■■■□□ 2.04
EPHB4-207ENST00000489808 WAPLQ7Z5K2 1190 aa27.8■■■□□ 2.04
EPHB4-207ENST00000489808 ADGRL3Q9HAR2 1447 aa27.8■■■□□ 2.04
EPHB4-207ENST00000489808 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.8■■■□□ 2.04
EPHB4-207ENST00000489808 SIRT1Q96EB6 747 aa27.78■■■□□ 2.04
EPHB4-207ENST00000489808 YTHDC2Q9H6S0 1430 aaKnown RBP27.77■■■□□ 2.04
EPHB4-207ENST00000489808 TECPR2O15040 1411 aa27.76■■■□□ 2.04
EPHB4-207ENST00000489808 BRINP3Q76B58 766 aa27.75■■■□□ 2.03
EPHB4-207ENST00000489808 SIN3AQ96ST3 1273 aa27.75■■■□□ 2.03
EPHB4-207ENST00000489808 ASXL1Q8IXJ9 1541 aa27.75■■■□□ 2.03
EPHB4-207ENST00000489808 ROBO1Q9Y6N7 1651 aa27.75■■■□□ 2.03
EPHB4-207ENST00000489808 MST1RQ04912 1400 aa27.73■■■□□ 2.03
EPHB4-207ENST00000489808 DISP3Q9P2K9 1392 aa27.72■■■□□ 2.03
EPHB4-207ENST00000489808 PLEKHH1Q9ULM0 1364 aa27.7■■■□□ 2.02
EPHB4-207ENST00000489808 NEUROD1Q13562 356 aa27.69■■■□□ 2.02
EPHB4-207ENST00000489808 L3MBTL2Q969R5 705 aa27.67■■■□□ 2.02
EPHB4-207ENST00000489808 PRAM1Q96QH2 718 aa27.66■■■□□ 2.02
EPHB4-207ENST00000489808 TRAK1Q9UPV9 953 aa27.65■■■□□ 2.02
EPHB4-207ENST00000489808 C1orf167Q5SNV9 1468 aa27.64■■■□□ 2.02
EPHB4-207ENST00000489808 NALCNQ8IZF0 1738 aa27.64■■■□□ 2.02
EPHB4-207ENST00000489808 LAMC1P11047 1609 aa27.63■■■□□ 2.01
EPHB4-207ENST00000489808 ORAI2Q96SN7 254 aa27.63■■■□□ 2.01
EPHB4-207ENST00000489808 POGKQ9P215 609 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms