RNA–Protein interactions for RNA: ENST00000488625.6

ZEB1-206, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 1 (best)

Gene ZEB1, Length 6,026 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-206ENST00000488625 CALD1Q05682 793 aaKnown RBP12.4□□□□□ -0.42
ZEB1-206ENST00000488625 GBP4Q96PP9 640 aa12.4□□□□□ -0.42
ZEB1-206ENST00000488625 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
ZEB1-206ENST00000488625 PTMSP20962 102 aa12.39□□□□□ -0.43
ZEB1-206ENST00000488625 GRIN2AQ12879 1464 aa12.39□□□□□ -0.43
ZEB1-206ENST00000488625 CFAP44Q96MT7 982 aa12.38□□□□□ -0.43
ZEB1-206ENST00000488625 ZKSCAN2Q63HK3 967 aa12.38□□□□□ -0.43
ZEB1-206ENST00000488625 PLEKHG5O94827 1062 aa12.38□□□□□ -0.43
ZEB1-206ENST00000488625 RUNDC1Q96C34 613 aa12.38□□□□□ -0.43
ZEB1-206ENST00000488625 EVC2Q86UK5 1308 aa12.37□□□□□ -0.43
ZEB1-206ENST00000488625 GCC2Q8IWJ2 1684 aa12.37□□□□□ -0.43
ZEB1-206ENST00000488625 CCDC141Q6ZP82 1450 aa12.37□□□□□ -0.43
ZEB1-206ENST00000488625 PBRM1Q86U86 1689 aa12.37□□□□□ -0.43
ZEB1-206ENST00000488625 BACH2Q9BYV9 841 aa12.37□□□□□ -0.43
ZEB1-206ENST00000488625 WDR62O43379 1518 aa12.37□□□□□ -0.43
ZEB1-206ENST00000488625 APBB1O00213 710 aa12.37□□□□□ -0.43
ZEB1-206ENST00000488625 NFKBIBQ15653 356 aa12.36□□□□□ -0.43
ZEB1-206ENST00000488625 PANK1Q8TE04 598 aa12.36□□□□□ -0.43
ZEB1-206ENST00000488625 FOXD4L1Q9NU39 408 aa12.36□□□□□ -0.43
ZEB1-206ENST00000488625 SOX12O15370 315 aa12.35□□□□□ -0.43
ZEB1-206ENST00000488625 NGEFQ8N5V2 710 aa12.35□□□□□ -0.43
ZEB1-206ENST00000488625 ADAMTS12P58397 1594 aa12.35□□□□□ -0.43
ZEB1-206ENST00000488625 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.35□□□□□ -0.433e-6■■■■□ 22.7
ZEB1-206ENST00000488625 STAC3Q96MF2 364 aa12.34□□□□□ -0.43
ZEB1-206ENST00000488625 SAMD9Q5K651 1589 aa12.34□□□□□ -0.43
ZEB1-206ENST00000488625 DNMT1P26358 1616 aaKnown RBP12.34□□□□□ -0.43
ZEB1-206ENST00000488625 MCCP23508 829 aa12.34□□□□□ -0.43
ZEB1-206ENST00000488625 MSNP26038 577 aaKnown RBP12.34□□□□□ -0.43
ZEB1-206ENST00000488625 KIAA0556O60303 1618 aa12.34□□□□□ -0.43
ZEB1-206ENST00000488625 DNTTIP2Q5QJE6 756 aaKnown RBP12.33□□□□□ -0.44
ZEB1-206ENST00000488625 RALGAPBQ86X10 1494 aa12.33□□□□□ -0.44
ZEB1-206ENST00000488625 SCAPERQ9BY12 1400 aa12.32□□□□□ -0.44
ZEB1-206ENST00000488625 RTF1Q92541 710 aaKnown RBP12.32□□□□□ -0.44
ZEB1-206ENST00000488625 VGFO15240 615 aaPredicted RBP12.32□□□□□ -0.44
ZEB1-206ENST00000488625 DZIP1LQ8IYY4 767 aaKnown RBP12.32□□□□□ -0.44
ZEB1-206ENST00000488625 DDX11L8A8MPP1 907 aa12.32□□□□□ -0.44
ZEB1-206ENST00000488625 OS9Q13438 667 aaPredicted RBP12.31□□□□□ -0.44
ZEB1-206ENST00000488625 GPATCH8Q9UKJ3 1502 aaKnown RBP12.31□□□□□ -0.44
ZEB1-206ENST00000488625 ZNF608Q9ULD9 1512 aaPredicted RBP12.31□□□□□ -0.44
ZEB1-206ENST00000488625 BCAR3O75815 825 aa12.31□□□□□ -0.44
ZEB1-206ENST00000488625 ABCA5Q8WWZ7 1642 aa12.31□□□□□ -0.44
ZEB1-206ENST00000488625 NUP153P49790 1475 aaKnown RBP12.3□□□□□ -0.44
ZEB1-206ENST00000488625 DDX19BQ9UMR2 479 aa12.3□□□□□ -0.44
ZEB1-206ENST00000488625 CHMP4AQ9BY43 222 aa12.3□□□□□ -0.44
ZEB1-206ENST00000488625 CFAP70Q5T0N1 1121 aa12.3□□□□□ -0.44
ZEB1-206ENST00000488625 ANKRD45Q5TZF3 282 aa12.3□□□□□ -0.44
ZEB1-206ENST00000488625 LMOD3Q0VAK6 560 aa12.28□□□□□ -0.44
ZEB1-206ENST00000488625 MINK1Q8N4C8 1332 aaPredicted RBP12.28□□□□□ -0.44
ZEB1-206ENST00000488625 ADGBQ8N7X0 1667 aa12.28□□□□□ -0.44
ZEB1-206ENST00000488625 RIPK4P57078 832 aa12.28□□□□□ -0.44
ZEB1-206ENST00000488625 DISP3Q9P2K9 1392 aa12.28□□□□□ -0.44
ZEB1-206ENST00000488625 AFAP1Q8N556 730 aa12.28□□□□□ -0.44
ZEB1-206ENST00000488625 PLCB2Q00722 1185 aa12.27□□□□□ -0.44
ZEB1-206ENST00000488625 FAM135AQ9P2D6 1515 aa12.27□□□□□ -0.44
ZEB1-206ENST00000488625 AAMPQ13685 434 aa12.27□□□□□ -0.44
ZEB1-206ENST00000488625 DIAPH1O60610 1272 aaKnown RBP12.27□□□□□ -0.45
ZEB1-206ENST00000488625 NINLQ9Y2I6 1382 aa12.27□□□□□ -0.45
ZEB1-206ENST00000488625 CABP2Q9NPB3 220 aa12.26□□□□□ -0.45
ZEB1-206ENST00000488625 TMEM132EQ6IEE7 984 aa12.26□□□□□ -0.45
ZEB1-206ENST00000488625 SKAP1Q86WV1 359 aa12.26□□□□□ -0.45
ZEB1-206ENST00000488625 C20orf194Q5TEA3 1177 aa12.25□□□□□ -0.45
ZEB1-206ENST00000488625 MAGI3Q5TCQ9 1506 aa12.25□□□□□ -0.45
ZEB1-206ENST00000488625 TCP11L2Q8N4U5 519 aa12.25□□□□□ -0.45
ZEB1-206ENST00000488625 NPHP1O15259 732 aa12.25□□□□□ -0.45
ZEB1-206ENST00000488625 SLFN5Q08AF3 891 aa12.25□□□□□ -0.45
ZEB1-206ENST00000488625 ELL2O00472 640 aaPredicted RBP12.25□□□□□ -0.45
ZEB1-206ENST00000488625 MTHFSP49914 203 aa12.25□□□□□ -0.45
ZEB1-206ENST00000488625 PDE3AQ14432 1141 aa12.25□□□□□ -0.45
ZEB1-206ENST00000488625 RSPH6AQ9H0K4 717 aa12.25□□□□□ -0.45
ZEB1-206ENST00000488625 C22orf23Q9BZE7 217 aa12.24□□□□□ -0.45
ZEB1-206ENST00000488625 PDZRN3Q9UPQ7 1066 aa12.24□□□□□ -0.45
ZEB1-206ENST00000488625 PZPP20742 1482 aa12.24□□□□□ -0.45
ZEB1-206ENST00000488625 FRAT2O75474 233 aaPredicted RBP12.24□□□□□ -0.45
ZEB1-206ENST00000488625 TEX14Q8IWB6 1497 aa12.23□□□□□ -0.45
ZEB1-206ENST00000488625 KDM6BO15054 1643 aa12.23□□□□□ -0.45
ZEB1-206ENST00000488625 CSB-PGBD3P0DP91 1061 aa12.23□□□□□ -0.45
ZEB1-206ENST00000488625 IL27Q8NEV9 243 aa12.23□□□□□ -0.45
ZEB1-206ENST00000488625 KCNJ4P48050 445 aa12.23□□□□□ -0.45
ZEB1-206ENST00000488625 SLC4A10Q6U841 1118 aa12.23□□□□□ -0.45
ZEB1-206ENST00000488625 CHMP5Q9NZZ3 219 aa12.23□□□□□ -0.45
ZEB1-206ENST00000488625 HMMRO75330 724 aa12.23□□□□□ -0.45
ZEB1-206ENST00000488625 EIF2AK4Q9P2K8 1649 aaKnown RBP12.22□□□□□ -0.45
ZEB1-206ENST00000488625 NKTRP30414 1462 aaKnown RBP12.22□□□□□ -0.45
ZEB1-206ENST00000488625 DHX29Q7Z478 1369 aaKnown RBP12.22□□□□□ -0.45
ZEB1-206ENST00000488625 TRIM6-TRIM34B2RNG4 842 aa12.22□□□□□ -0.45
ZEB1-206ENST00000488625 BRPF3Q9ULD4 1205 aa12.22□□□□□ -0.45
ZEB1-206ENST00000488625 KIF16BQ96L93 1317 aa12.22□□□□□ -0.45
ZEB1-206ENST00000488625 GGNBP2Q9H3C7 697 aa12.22□□□□□ -0.45
ZEB1-206ENST00000488625 ST18O60284 1047 aa12.21□□□□□ -0.45
ZEB1-206ENST00000488625 SKOR2Q2VWA4 1001 aaPredicted RBP12.21□□□□□ -0.45
ZEB1-206ENST00000488625 NGDNQ8NEJ9 315 aaKnown RBP12.21□□□□□ -0.45
ZEB1-206ENST00000488625 STK31Q9BXU1 1019 aa12.21□□□□□ -0.45
ZEB1-206ENST00000488625 COG3Q96JB2 828 aa12.21□□□□□ -0.46
ZEB1-206ENST00000488625 NOL8Q76FK4 1167 aaKnown RBP12.2□□□□□ -0.46
ZEB1-206ENST00000488625 CCDC9Q9Y3X0 531 aaKnown RBP12.2□□□□□ -0.46
ZEB1-206ENST00000488625 PRAG1Q86YV5 1406 aa12.2□□□□□ -0.46
ZEB1-206ENST00000488625 NSD3Q9BZ95 1437 aa12.2□□□□□ -0.46
ZEB1-206ENST00000488625 ARHGEF12Q9NZN5 1544 aa12.19□□□□□ -0.46
ZEB1-206ENST00000488625 THEMISQ8N1K5 641 aaPredicted RBP12.19□□□□□ -0.46
ZEB1-206ENST00000488625 LNPKQ9C0E8 428 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms