RNA–Protein interactions for RNA: ENST00000488353.2

RER1-207, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 2,469 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-207ENST00000488353 KTN1Q86UP2 1357 aaKnown RBP18.65■□□□□ 0.58
RER1-207ENST00000488353 KIDINS220Q9ULH0 1771 aa18.65■□□□□ 0.58
RER1-207ENST00000488353 CYB5RLQ6IPT4 315 aa18.65■□□□□ 0.58
RER1-207ENST00000488353 GPRASP1Q5JY77 1395 aa18.64■□□□□ 0.58
RER1-207ENST00000488353 NLRP13Q86W25 1043 aa18.64■□□□□ 0.58
RER1-207ENST00000488353 TRPM2O94759 1503 aa18.64■□□□□ 0.57
RER1-207ENST00000488353 ZNF518AQ6AHZ1 1483 aa18.64■□□□□ 0.57
RER1-207ENST00000488353 PDE3BQ13370 1112 aa18.64■□□□□ 0.57
RER1-207ENST00000488353 FRAT1Q92837 279 aaPredicted RBP18.64■□□□□ 0.57
RER1-207ENST00000488353 SPHKAPQ2M3C7 1700 aa18.63■□□□□ 0.57
RER1-207ENST00000488353 TET3O43151 1660 aa18.63■□□□□ 0.57
RER1-207ENST00000488353 CLTCL1P53675 1640 aa18.63■□□□□ 0.57
RER1-207ENST00000488353 PER1O15534 1290 aaPredicted RBP18.62■□□□□ 0.57
RER1-207ENST00000488353 PTPRTO14522 1441 aa18.62■□□□□ 0.57
RER1-207ENST00000488353 MROH1Q8NDA8 1641 aa18.62■□□□□ 0.57
RER1-207ENST00000488353 DAXXQ9UER7 740 aaPredicted RBP18.62■□□□□ 0.57
RER1-207ENST00000488353 VWDEQ8N2E2 1590 aa18.62■□□□□ 0.57
RER1-207ENST00000488353 PARD3Q8TEW0 1356 aa18.61■□□□□ 0.57
RER1-207ENST00000488353 DISP3Q9P2K9 1392 aa18.61■□□□□ 0.57
RER1-207ENST00000488353 CDCA7LQ96GN5 454 aa18.61■□□□□ 0.57
RER1-207ENST00000488353 PRDM15P57071 1507 aaPredicted RBP18.61■□□□□ 0.57
RER1-207ENST00000488353 RSPH6AQ9H0K4 717 aa18.6■□□□□ 0.57
RER1-207ENST00000488353 PANK3Q9H999 370 aa18.6■□□□□ 0.57
RER1-207ENST00000488353 EIF2AK4Q9P2K8 1649 aaKnown RBP18.6■□□□□ 0.57
RER1-207ENST00000488353 POGZQ7Z3K3 1410 aa18.59■□□□□ 0.57
RER1-207ENST00000488353 TESK2Q96S53 571 aa18.59■□□□□ 0.57
RER1-207ENST00000488353 UGGT1Q9NYU2 1555 aa18.59■□□□□ 0.57
RER1-207ENST00000488353 RAPGEF3O95398 923 aa18.59■□□□□ 0.57
RER1-207ENST00000488353 CEP152O94986 1710 aa18.58■□□□□ 0.56
RER1-207ENST00000488353 GGT6Q6P531 493 aa18.57■□□□□ 0.56
RER1-207ENST00000488353 FAM43AQ8N2R8 423 aa18.56■□□□□ 0.56
RER1-207ENST00000488353 LAMC1P11047 1609 aa18.56■□□□□ 0.56
RER1-207ENST00000488353 MADDQ8WXG6 1647 aa18.56■□□□□ 0.56
RER1-207ENST00000488353 COL17A1Q9UMD9 1497 aaPredicted RBP18.55■□□□□ 0.56
RER1-207ENST00000488353 CFAP74Q9C0B2 1584 aa18.55■□□□□ 0.56
RER1-207ENST00000488353 PLIN1O60240 522 aa18.54■□□□□ 0.56
RER1-207ENST00000488353 TMF1P82094 1093 aa18.54■□□□□ 0.56
RER1-207ENST00000488353 RNF17Q9BXT8 1623 aaKnown RBP18.53■□□□□ 0.56
RER1-207ENST00000488353 EFCAB6Q5THR3 1501 aa18.53■□□□□ 0.56
RER1-207ENST00000488353 PPRC1Q5VV67 1664 aaKnown RBP18.53■□□□□ 0.56
RER1-207ENST00000488353 SLC4A3P48751 1232 aa18.52■□□□□ 0.56
RER1-207ENST00000488353 FRMPD1Q5SYB0 1578 aa18.52■□□□□ 0.56
RER1-207ENST00000488353 HECW2Q9P2P5 1572 aa18.52■□□□□ 0.56
RER1-207ENST00000488353 MLH3Q9UHC1 1453 aa18.52■□□□□ 0.55
RER1-207ENST00000488353 CFAP65Q6ZU64 1925 aaKnown RBP18.49■□□□□ 0.55
RER1-207ENST00000488353 ABCA6Q8N139 1617 aa18.49■□□□□ 0.55
RER1-207ENST00000488353 CHGAP10645 457 aaKnown RBP18.49■□□□□ 0.55
RER1-207ENST00000488353 CRBNQ96SW2 442 aa18.49■□□□□ 0.55
RER1-207ENST00000488353 SKAP1Q86WV1 359 aa18.48■□□□□ 0.55
RER1-207ENST00000488353 ADGRF5Q8IZF2 1346 aa18.48■□□□□ 0.55
RER1-207ENST00000488353 NEO1Q92859 1461 aa18.47■□□□□ 0.55
RER1-207ENST00000488353 FAM161AQ3B820 660 aa18.47■□□□□ 0.55
RER1-207ENST00000488353 CFAP70Q5T0N1 1121 aa18.47■□□□□ 0.55
RER1-207ENST00000488353 FRAT2O75474 233 aaPredicted RBP18.46■□□□□ 0.55
RER1-207ENST00000488353 NPATQ14207 1427 aa18.46■□□□□ 0.55
RER1-207ENST00000488353 RIMBP3CA6NJZ7 1639 aa18.46■□□□□ 0.54
RER1-207ENST00000488353 RIMBP3BA6NNM3 1639 aa18.46■□□□□ 0.54
RER1-207ENST00000488353 RIMBP3Q9UFD9 1639 aa18.46■□□□□ 0.54
RER1-207ENST00000488353 LMTK2Q8IWU2 1503 aa18.46■□□□□ 0.54
RER1-207ENST00000488353 ADAMTS8Q9UP79 889 aa18.45■□□□□ 0.54
RER1-207ENST00000488353 IQGAP1P46940 1657 aa18.45■□□□□ 0.54
RER1-207ENST00000488353 KDM2BQ8NHM5 1336 aa18.45■□□□□ 0.54
RER1-207ENST00000488353 CENPQQ7L2Z9 268 aaPredicted RBP18.44■□□□□ 0.54
RER1-207ENST00000488353 STAC3Q96MF2 364 aa18.44■□□□□ 0.54
RER1-207ENST00000488353 MROH2AA6NES4 1674 aa18.44■□□□□ 0.54
RER1-207ENST00000488353 SCAF11Q99590 1463 aaKnown RBP18.44■□□□□ 0.54
RER1-207ENST00000488353 KIF1BO60333 1816 aa18.44■□□□□ 0.54
RER1-207ENST00000488353 BLMP54132 1417 aaPredicted RBP18.43■□□□□ 0.54
RER1-207ENST00000488353 KNSTRNQ9Y448 316 aa18.43■□□□□ 0.54
RER1-207ENST00000488353 INSRP06213 1382 aa18.42■□□□□ 0.54
RER1-207ENST00000488353 C8orf34Q49A92 452 aa18.42■□□□□ 0.54
RER1-207ENST00000488353 MAP3K4Q9Y6R4 1608 aa18.41■□□□□ 0.54
RER1-207ENST00000488353 YEATS2Q9ULM3 1422 aa18.4■□□□□ 0.54
RER1-207ENST00000488353 ABCC3O15438 1527 aa18.4■□□□□ 0.54
RER1-207ENST00000488353 DIP2CQ9Y2E4 1556 aa18.4■□□□□ 0.54
RER1-207ENST00000488353 PPP2R1AP30153 589 aa18.4■□□□□ 0.54
RER1-207ENST00000488353 FAM69CQ0P6D2 419 aa18.4■□□□□ 0.54
RER1-207ENST00000488353 NOS1P29475 1434 aa18.4■□□□□ 0.54
RER1-207ENST00000488353 ZMYM4Q5VZL5 1548 aa18.39■□□□□ 0.53
RER1-207ENST00000488353 NEURL4Q96JN8 1562 aa18.39■□□□□ 0.53
RER1-207ENST00000488353 MYOM2P54296 1465 aa18.39■□□□□ 0.53
RER1-207ENST00000488353 WDR43Q15061 677 aaKnown RBP eCLIP18.39■□□□□ 0.53
RER1-207ENST00000488353 C20orf194Q5TEA3 1177 aa18.39■□□□□ 0.53
RER1-207ENST00000488353 RICTORQ6R327 1708 aa18.38■□□□□ 0.53
RER1-207ENST00000488353 ADGRB3O60242 1522 aa18.37■□□□□ 0.53
RER1-207ENST00000488353 IFT172Q9UG01 1749 aa18.36■□□□□ 0.53
RER1-207ENST00000488353 EIF3AQ14152 1382 aaKnown RBP18.36■□□□□ 0.53
RER1-207ENST00000488353 NUTM2DQ5VT03 806 aaPredicted RBP18.35■□□□□ 0.53
RER1-207ENST00000488353 AMER1Q5JTC6 1135 aaPredicted RBP18.35■□□□□ 0.53
RER1-207ENST00000488353 KIAA1210Q9ULL0 1709 aa18.35■□□□□ 0.53
RER1-207ENST00000488353 PLEKHH1Q9ULM0 1364 aa18.34■□□□□ 0.53
RER1-207ENST00000488353 GLIPR1L2Q4G1C9 344 aa18.34■□□□□ 0.53
RER1-207ENST00000488353 CAMSAP1Q5T5Y3 1602 aa18.34■□□□□ 0.53
RER1-207ENST00000488353 SIGLEC1Q9BZZ2 1709 aa18.33■□□□□ 0.53
RER1-207ENST00000488353 CCDC146Q8IYE0 955 aa18.32■□□□□ 0.52
RER1-207ENST00000488353 NRXN1Q9ULB1 1477 aa18.32■□□□□ 0.52
RER1-207ENST00000488353 CDCA8Q53HL2 280 aa18.32■□□□□ 0.52
RER1-207ENST00000488353 SENP3Q9H4L4 574 aaPredicted RBP18.32■□□□□ 0.52
RER1-207ENST00000488353 L1TD1Q5T7N2 865 aaKnown RBP18.31■□□□□ 0.52
RER1-207ENST00000488353 GLI2P10070 1586 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms