RNA–Protein interactions for RNA: ENST00000486975.1

CLDN11-207, Transcript of claudin 11, humanhuman

TSL 2 BASIC

Gene CLDN11, Length 1,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-207ENST00000486975 GCC2Q8IWJ2 1684 aa22■■□□□ 1.11
CLDN11-207ENST00000486975 IQGAP3Q86VI3 1631 aa21.99■■□□□ 1.11
CLDN11-207ENST00000486975 LTKP29376 864 aa21.99■■□□□ 1.11
CLDN11-207ENST00000486975 ADGRB3O60242 1522 aa21.99■■□□□ 1.11
CLDN11-207ENST00000486975 ITGAEP38570 1179 aa21.98■■□□□ 1.11
CLDN11-207ENST00000486975 TXNDC2Q86VQ3 553 aa21.98■■□□□ 1.11
CLDN11-207ENST00000486975 EID1Q9Y6B2 187 aa21.98■■□□□ 1.11
CLDN11-207ENST00000486975 STAG3Q9UJ98 1225 aa21.97■■□□□ 1.11
CLDN11-207ENST00000486975 CAPN15O75808 1086 aa21.96■■□□□ 1.11
CLDN11-207ENST00000486975 NUP155O75694 1391 aa21.94■■□□□ 1.1
CLDN11-207ENST00000486975 UBAP1LF5GYI3 381 aa21.93■■□□□ 1.1
CLDN11-207ENST00000486975 E9PCH4 1651 aa21.92■■□□□ 1.1
CLDN11-207ENST00000486975 LRRC7Q96NW7 1537 aa21.88■■□□□ 1.09
CLDN11-207ENST00000486975 STRCP1A6NGW2 1772 aa21.88■■□□□ 1.09
CLDN11-207ENST00000486975 NAIPQ13075 1403 aa21.88■■□□□ 1.09
CLDN11-207ENST00000486975 ZFYVE9O95405 1425 aa21.87■■□□□ 1.09
CLDN11-207ENST00000486975 TMEM131LA2VDJ0 1609 aa21.87■■□□□ 1.09
CLDN11-207ENST00000486975 TOM1O60784 492 aa21.85■■□□□ 1.09
CLDN11-207ENST00000486975 HFM1A2PYH4 1435 aa21.84■■□□□ 1.09
CLDN11-207ENST00000486975 HDGFP51858 240 aaKnown RBP21.82■■□□□ 1.08
CLDN11-207ENST00000486975 RIMS2Q9UQ26 1411 aa21.81■■□□□ 1.08
CLDN11-207ENST00000486975 DSG3P32926 999 aa21.81■■□□□ 1.08
CLDN11-207ENST00000486975 PLEKHG1Q9ULL1 1385 aa21.81■■□□□ 1.08
CLDN11-207ENST00000486975 ALKQ9UM73 1620 aa21.8■■□□□ 1.08
CLDN11-207ENST00000486975 MYO5BQ9ULV0 1848 aa21.78■■□□□ 1.08
CLDN11-207ENST00000486975 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.78■■□□□ 1.08
CLDN11-207ENST00000486975 KCNA6P17658 529 aa21.77■■□□□ 1.08
CLDN11-207ENST00000486975 SLC26A8Q96RN1 970 aa21.77■■□□□ 1.08
CLDN11-207ENST00000486975 NWD1Q149M9 1564 aa21.77■■□□□ 1.08
CLDN11-207ENST00000486975 SPHKAPQ2M3C7 1700 aa21.76■■□□□ 1.07
CLDN11-207ENST00000486975 NKTRP30414 1462 aaKnown RBP21.76■■□□□ 1.07
CLDN11-207ENST00000486975 PPP1R15AO75807 674 aaPredicted RBP21.75■■□□□ 1.07
CLDN11-207ENST00000486975 CHGAP10645 457 aaKnown RBP21.74■■□□□ 1.07
CLDN11-207ENST00000486975 PIP4K2BP78356 416 aa21.73■■□□□ 1.07
CLDN11-207ENST00000486975 TRPM2O94759 1503 aa21.72■■□□□ 1.07
CLDN11-207ENST00000486975 SLC4A1APQ9BWU0 796 aaKnown RBP21.72■■□□□ 1.07
CLDN11-207ENST00000486975 XIRP1Q702N8 1843 aaKnown RBP21.71■■□□□ 1.07
CLDN11-207ENST00000486975 TBX22Q9Y458 520 aa21.71■■□□□ 1.07
CLDN11-207ENST00000486975 DIP2AQ14689 1571 aa21.7■■□□□ 1.06
CLDN11-207ENST00000486975 BCANQ96GW7 911 aa21.7■■□□□ 1.06
CLDN11-207ENST00000486975 TMEM94Q12767 1356 aa21.7■■□□□ 1.06
CLDN11-207ENST00000486975 ADAMTS13Q76LX8 1427 aa21.69■■□□□ 1.06
CLDN11-207ENST00000486975 HSPA1LP34931 641 aa21.68■■□□□ 1.06
CLDN11-207ENST00000486975 PIK3R4Q99570 1358 aa21.67■■□□□ 1.06
CLDN11-207ENST00000486975 CLTCL1P53675 1640 aa21.66■■□□□ 1.06
CLDN11-207ENST00000486975 DISP3Q9P2K9 1392 aa21.66■■□□□ 1.06
CLDN11-207ENST00000486975 CHD2O14647 1828 aaKnown RBP21.66■■□□□ 1.06
CLDN11-207ENST00000486975 SAMD1Q6SPF0 538 aaPredicted RBP21.65■■□□□ 1.06
CLDN11-207ENST00000486975 PROSER2Q86WR7 435 aaPredicted RBP21.65■■□□□ 1.06
CLDN11-207ENST00000486975 TRIM52Q96A61 297 aa21.65■■□□□ 1.06
CLDN11-207ENST00000486975 SETBP1Q9Y6X0 1596 aa21.62■■□□□ 1.05
CLDN11-207ENST00000486975 NCOA3Q9Y6Q9 1424 aa21.62■■□□□ 1.05
CLDN11-207ENST00000486975 NUTM2DQ5VT03 806 aaPredicted RBP21.61■■□□□ 1.05
CLDN11-207ENST00000486975 FAM135BQ49AJ0 1406 aa21.61■■□□□ 1.05
CLDN11-207ENST00000486975 NEXMIFQ5QGS0 1516 aa21.6■■□□□ 1.05
CLDN11-207ENST00000486975 ZNF219Q9P2Y4 722 aaPredicted RBP21.6■■□□□ 1.05
CLDN11-207ENST00000486975 ACIN1Q9UKV3 1341 aaKnown RBP21.59■■□□□ 1.05
CLDN11-207ENST00000486975 NRXN3Q9Y4C0 1643 aa21.59■■□□□ 1.05
CLDN11-207ENST00000486975 ZNF326Q5BKZ1 582 aaKnown RBP21.59■■□□□ 1.05
CLDN11-207ENST00000486975 MSH6P52701 1360 aa21.58■■□□□ 1.04
CLDN11-207ENST00000486975 KIF1BO60333 1816 aa21.57■■□□□ 1.04
CLDN11-207ENST00000486975 MYCNP04198 464 aaPredicted RBP21.56■■□□□ 1.04
CLDN11-207ENST00000486975 RBM33Q96EV2 1170 aaKnown RBP21.55■■□□□ 1.04
CLDN11-207ENST00000486975 PTPRUQ92729 1446 aa21.54■■□□□ 1.04
CLDN11-207ENST00000486975 RPGRIP1LQ68CZ1 1315 aa21.53■■□□□ 1.04
CLDN11-207ENST00000486975 AMOTL2Q9Y2J4 779 aa21.52■■□□□ 1.04
CLDN11-207ENST00000486975 MED1Q15648 1581 aaPredicted RBP21.52■■□□□ 1.04
CLDN11-207ENST00000486975 XRN1Q8IZH2 1706 aaKnown RBP21.52■■□□□ 1.03
CLDN11-207ENST00000486975 SETD5Q9C0A6 1442 aa21.51■■□□□ 1.03
CLDN11-207ENST00000486975 MPHOSPH9Q99550 1183 aa21.5■■□□□ 1.03
CLDN11-207ENST00000486975 VGFO15240 615 aaPredicted RBP21.49■■□□□ 1.03
CLDN11-207ENST00000486975 ABCB7O75027 752 aa21.49■■□□□ 1.03
CLDN11-207ENST00000486975 ROBO1Q9Y6N7 1651 aa21.49■■□□□ 1.03
CLDN11-207ENST00000486975 METP08581 1390 aa21.48■■□□□ 1.03
CLDN11-207ENST00000486975 CCDC144AA2RUR9 1427 aa21.48■■□□□ 1.03
CLDN11-207ENST00000486975 ILDR2Q71H61 639 aa21.48■■□□□ 1.03
CLDN11-207ENST00000486975 C19orf44Q9H6X5 657 aa21.48■■□□□ 1.03
CLDN11-207ENST00000486975 SLAIN2Q9P270 581 aa21.48■■□□□ 1.03
CLDN11-207ENST00000486975 DCCP43146 1447 aa21.46■■□□□ 1.03
CLDN11-207ENST00000486975 CADPS2Q86UW7 1296 aa21.45■■□□□ 1.02
CLDN11-207ENST00000486975 SPATA31E1Q6ZUB1 1445 aa21.45■■□□□ 1.02
CLDN11-207ENST00000486975 C14orf37Q86TY3 774 aa21.44■■□□□ 1.02
CLDN11-207ENST00000486975 PRAG1Q86YV5 1406 aa21.44■■□□□ 1.02
CLDN11-207ENST00000486975 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.43■■□□□ 1.02
CLDN11-207ENST00000486975 PPLO60437 1756 aa21.43■■□□□ 1.02
CLDN11-207ENST00000486975 SETD1AO15047 1707 aaKnown RBP21.42■■□□□ 1.02
CLDN11-207ENST00000486975 RAB3GAP2Q9H2M9 1393 aa21.42■■□□□ 1.02
CLDN11-207ENST00000486975 ATF3P18847 181 aa21.41■■□□□ 1.02
CLDN11-207ENST00000486975 FOXD4L1Q9NU39 408 aa21.41■■□□□ 1.02
CLDN11-207ENST00000486975 PTCH1Q13635 1447 aa21.4■■□□□ 1.02
CLDN11-207ENST00000486975 ANKRD30BQ9BXX2 1392 aa21.39■■□□□ 1.02
CLDN11-207ENST00000486975 ADGRL3Q9HAR2 1447 aa21.38■■□□□ 1.01
CLDN11-207ENST00000486975 IFT172Q9UG01 1749 aa21.35■■□□□ 1.01
CLDN11-207ENST00000486975 SOCS7O14512 581 aa21.35■■□□□ 1.01
CLDN11-207ENST00000486975 HRCP23327 699 aa21.35■■□□□ 1.01
CLDN11-207ENST00000486975 AHDC1Q5TGY3 1603 aaPredicted RBP21.34■■□□□ 1.01
CLDN11-207ENST00000486975 PHLPP1O60346 1717 aa21.34■■□□□ 1.01
CLDN11-207ENST00000486975 COL16A1Q07092 1604 aaPredicted RBP21.33■■□□□ 1.01
CLDN11-207ENST00000486975 MST1RQ04912 1400 aa21.33■■□□□ 1.01
CLDN11-207ENST00000486975 ADGRF5Q8IZF2 1346 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms