RNA–Protein interactions for RNA: ENST00000486184.1

NUP50-216, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 821 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-216ENST00000486184 TMEM2Q9UHN6 1383 aa16.57■□□□□ 0.24
NUP50-216ENST00000486184 HDGFP51858 240 aaKnown RBP16.57■□□□□ 0.24
NUP50-216ENST00000486184 ARHGAP23Q9P227 1491 aa16.56■□□□□ 0.24
NUP50-216ENST00000486184 ANKLE2Q86XL3 938 aa16.56■□□□□ 0.24
NUP50-216ENST00000486184 IFT172Q9UG01 1749 aa16.56■□□□□ 0.24
NUP50-216ENST00000486184 RIMS2Q9UQ26 1411 aa16.55■□□□□ 0.24
NUP50-216ENST00000486184 PPP1R15AO75807 674 aaPredicted RBP16.55■□□□□ 0.24
NUP50-216ENST00000486184 CCER1Q8TC90 406 aaPredicted RBP16.55■□□□□ 0.24
NUP50-216ENST00000486184 IQGAP1P46940 1657 aa16.55■□□□□ 0.24
NUP50-216ENST00000486184 SCAF11Q99590 1463 aaKnown RBP16.54■□□□□ 0.24
NUP50-216ENST00000486184 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.54■□□□□ 0.24
NUP50-216ENST00000486184 NEXMIFQ5QGS0 1516 aa16.54■□□□□ 0.24
NUP50-216ENST00000486184 RGL3Q3MIN7 710 aa16.53■□□□□ 0.24
NUP50-216ENST00000486184 TXNDC2Q86VQ3 553 aa16.53■□□□□ 0.24
NUP50-216ENST00000486184 SPATA31E1Q6ZUB1 1445 aa16.53■□□□□ 0.24
NUP50-216ENST00000486184 NCKAP5LQ9HCH0 1330 aa16.52■□□□□ 0.24
NUP50-216ENST00000486184 ZFYVE9O95405 1425 aa16.52■□□□□ 0.23
NUP50-216ENST00000486184 RPGRIP1LQ68CZ1 1315 aa16.51■□□□□ 0.23
NUP50-216ENST00000486184 NEUROD1Q13562 356 aa16.51■□□□□ 0.23
NUP50-216ENST00000486184 BCANQ96GW7 911 aa16.5■□□□□ 0.23
NUP50-216ENST00000486184 DMRT2Q9Y5R5 561 aa16.5■□□□□ 0.23
NUP50-216ENST00000486184 CLSPNQ9HAW4 1339 aa16.49■□□□□ 0.23
NUP50-216ENST00000486184 NPHP4O75161 1426 aaPredicted RBP16.49■□□□□ 0.23
NUP50-216ENST00000486184 MAPK8IP2Q13387 824 aaPredicted RBP16.49■□□□□ 0.23
NUP50-216ENST00000486184 NCBP3Q53F19 620 aaKnown RBP16.49■□□□□ 0.23
NUP50-216ENST00000486184 NUTM2DQ5VT03 806 aaPredicted RBP16.49■□□□□ 0.23
NUP50-216ENST00000486184 SIN3AQ96ST3 1273 aa16.49■□□□□ 0.23
NUP50-216ENST00000486184 MED14O60244 1454 aa16.48■□□□□ 0.23
NUP50-216ENST00000486184 LTKP29376 864 aa16.48■□□□□ 0.23
NUP50-216ENST00000486184 VGFO15240 615 aaPredicted RBP16.47■□□□□ 0.23
NUP50-216ENST00000486184 PLEKHG1Q9ULL1 1385 aa16.46■□□□□ 0.23
NUP50-216ENST00000486184 TONSLQ96HA7 1378 aa16.45■□□□□ 0.22
NUP50-216ENST00000486184 DIP2AQ14689 1571 aa16.44■□□□□ 0.22
NUP50-216ENST00000486184 MYOM2P54296 1465 aa16.44■□□□□ 0.22
NUP50-216ENST00000486184 DCAF11Q8TEB1 546 aa16.44■□□□□ 0.22
NUP50-216ENST00000486184 SETBP1Q9Y6X0 1596 aa16.43■□□□□ 0.22
NUP50-216ENST00000486184 LAMC1P11047 1609 aa16.42■□□□□ 0.22
NUP50-216ENST00000486184 KDM2AQ9Y2K7 1162 aa16.42■□□□□ 0.22
NUP50-216ENST00000486184 NRXN3Q9Y4C0 1643 aa16.41■□□□□ 0.22
NUP50-216ENST00000486184 STAC3Q96MF2 364 aa16.41■□□□□ 0.22
NUP50-216ENST00000486184 CNKSR2Q8WXI2 1034 aa16.4■□□□□ 0.22
NUP50-216ENST00000486184 ADGRF5Q8IZF2 1346 aa16.39■□□□□ 0.21
NUP50-216ENST00000486184 KCNA4P22459 653 aa16.38■□□□□ 0.21
NUP50-216ENST00000486184 SLC26A8Q96RN1 970 aa16.38■□□□□ 0.21
NUP50-216ENST00000486184 SETD1AO15047 1707 aaKnown RBP16.38■□□□□ 0.21
NUP50-216ENST00000486184 ALKQ9UM73 1620 aa16.37■□□□□ 0.21
NUP50-216ENST00000486184 PIK3C2GO75747 1445 aa16.37■□□□□ 0.21
NUP50-216ENST00000486184 L3MBTL2Q969R5 705 aa16.37■□□□□ 0.21
NUP50-216ENST00000486184 CHD2O14647 1828 aaKnown RBP16.37■□□□□ 0.21
NUP50-216ENST00000486184 NRXN1Q9ULB1 1477 aa16.36■□□□□ 0.21
NUP50-216ENST00000486184 KIAA1210Q9ULL0 1709 aa16.36■□□□□ 0.21
NUP50-216ENST00000486184 ADAMTS13Q76LX8 1427 aa16.36■□□□□ 0.21
NUP50-216ENST00000486184 TBX22Q9Y458 520 aa16.34■□□□□ 0.21
NUP50-216ENST00000486184 TIMELESSQ9UNS1 1208 aa16.33■□□□□ 0.2
NUP50-216ENST00000486184 STRCP1A6NGW2 1772 aa16.32■□□□□ 0.2
NUP50-216ENST00000486184 PRAG1Q86YV5 1406 aa16.32■□□□□ 0.2
NUP50-216ENST00000486184 PIK3R4Q99570 1358 aa16.32■□□□□ 0.2
NUP50-216ENST00000486184 TRPM1Q7Z4N2 1603 aa16.31■□□□□ 0.2
NUP50-216ENST00000486184 NWD1Q149M9 1564 aa16.31■□□□□ 0.2
NUP50-216ENST00000486184 ZNF335Q9H4Z2 1342 aaPredicted RBP16.3■□□□□ 0.2
NUP50-216ENST00000486184 CPS1P31327 1500 aa16.29■□□□□ 0.2
NUP50-216ENST00000486184 KNDC1Q76NI1 1749 aa16.29■□□□□ 0.2
NUP50-216ENST00000486184 XRN1Q8IZH2 1706 aaKnown RBP16.29■□□□□ 0.2
NUP50-216ENST00000486184 CFAP70Q5T0N1 1121 aa16.29■□□□□ 0.2
NUP50-216ENST00000486184 C14orf93Q9H972 538 aaKnown RBP16.29■□□□□ 0.2
NUP50-216ENST00000486184 METP08581 1390 aa16.28■□□□□ 0.2
NUP50-216ENST00000486184 NKTRP30414 1462 aaKnown RBP16.28■□□□□ 0.2
NUP50-216ENST00000486184 KCNA6P17658 529 aa16.27■□□□□ 0.2
NUP50-216ENST00000486184 ASXL1Q8IXJ9 1541 aa16.26■□□□□ 0.19
NUP50-216ENST00000486184 AMOTL2Q9Y2J4 779 aa16.25■□□□□ 0.19
NUP50-216ENST00000486184 LTBP4Q8N2S1 1624 aa16.25■□□□□ 0.19
NUP50-216ENST00000486184 TMEM132EQ6IEE7 984 aa16.24■□□□□ 0.19
NUP50-216ENST00000486184 PTPRUQ92729 1446 aa16.24■□□□□ 0.19
NUP50-216ENST00000486184 YTHDC2Q9H6S0 1430 aaKnown RBP16.24■□□□□ 0.19
NUP50-216ENST00000486184 ADGRB1O14514 1584 aa16.24■□□□□ 0.19
NUP50-216ENST00000486184 STK26Q9P289 416 aa16.23■□□□□ 0.19
NUP50-216ENST00000486184 ROCK2O75116 1388 aaKnown RBP16.23■□□□□ 0.19
NUP50-216ENST00000486184 XIRP1Q702N8 1843 aaKnown RBP16.22■□□□□ 0.19
NUP50-216ENST00000486184 PROSER2Q86WR7 435 aaPredicted RBP16.22■□□□□ 0.19
NUP50-216ENST00000486184 LRPPRCP42704 1394 aaKnown RBP16.22■□□□□ 0.19
NUP50-216ENST00000486184 ARHGEF28Q8N1W1 1705 aaKnown RBP16.22■□□□□ 0.19
NUP50-216ENST00000486184 RALGAPBQ86X10 1494 aa16.22■□□□□ 0.19
NUP50-216ENST00000486184 NBPF8Q3BBV2 869 aa16.21■□□□□ 0.19
NUP50-216ENST00000486184 PTCH1Q13635 1447 aa16.2■□□□□ 0.18
NUP50-216ENST00000486184 LRRC7Q96NW7 1537 aa16.2■□□□□ 0.18
NUP50-216ENST00000486184 C14orf37Q86TY3 774 aa16.19■□□□□ 0.18
NUP50-216ENST00000486184 DLC1Q96QB1 1528 aa16.19■□□□□ 0.18
NUP50-216ENST00000486184 TECPR2O15040 1411 aa16.19■□□□□ 0.18
NUP50-216ENST00000486184 ABCC11Q96J66 1382 aa16.18■□□□□ 0.18
NUP50-216ENST00000486184 NBPF1Q3BBV0 1214 aa16.18■□□□□ 0.18
NUP50-216ENST00000486184 TRAK1Q9UPV9 953 aa16.17■□□□□ 0.18
NUP50-216ENST00000486184 NALCNQ8IZF0 1738 aa16.16■□□□□ 0.18
NUP50-216ENST00000486184 IQSEC2Q5JU85 1478 aa16.16■□□□□ 0.18
NUP50-216ENST00000486184 TMEM94Q12767 1356 aa16.16■□□□□ 0.18
NUP50-216ENST00000486184 CARD11Q9BXL7 1154 aa16.16■□□□□ 0.18
NUP50-216ENST00000486184 POGKQ9P215 609 aa16.16■□□□□ 0.18
NUP50-216ENST00000486184 EIF3AQ14152 1382 aaKnown RBP16.15■□□□□ 0.18
NUP50-216ENST00000486184 ROBO2Q9HCK4 1378 aa16.15■□□□□ 0.18
NUP50-216ENST00000486184 QRICH2Q9H0J4 1663 aa16.15■□□□□ 0.18
NUP50-216ENST00000486184 FAM135BQ49AJ0 1406 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms