RNA–Protein interactions for RNA: ENST00000484213.1

ABCD3-205, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best)

Gene ABCD3, Length 4,367 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-205ENST00000484213 UPF1Q92900 1129 aaKnown RBP eCLIP6.1□□□□□ -1.438e-6■■□□□ 12.8
ABCD3-205ENST00000484213 KDM5DQ9BY66 1539 aa6.1□□□□□ -1.43
ABCD3-205ENST00000484213 SOCS7O14512 581 aa6.09□□□□□ -1.43
ABCD3-205ENST00000484213 ARHGAP35Q9NRY4 1499 aa6.09□□□□□ -1.43
ABCD3-205ENST00000484213 ARHGEF12Q9NZN5 1544 aa6.09□□□□□ -1.43
ABCD3-205ENST00000484213 CADPS2Q86UW7 1296 aa6.09□□□□□ -1.43
ABCD3-205ENST00000484213 PIK3R4Q99570 1358 aa6.09□□□□□ -1.43
ABCD3-205ENST00000484213 MROH2AA6NES4 1674 aa6.08□□□□□ -1.44
ABCD3-205ENST00000484213 ADAMTSL3P82987 1691 aa6.08□□□□□ -1.44
ABCD3-205ENST00000484213 LARP6Q9BRS8 491 aaKnown RBP6.08□□□□□ -1.44
ABCD3-205ENST00000484213 ZMYM3Q14202 1370 aa6.08□□□□□ -1.44
ABCD3-205ENST00000484213 CHADLQ6NUI6 762 aa6.08□□□□□ -1.44
ABCD3-205ENST00000484213 CAMSAP2Q08AD1 1489 aa6.08□□□□□ -1.44
ABCD3-205ENST00000484213 KDM2AQ9Y2K7 1162 aa6.07□□□□□ -1.44
ABCD3-205ENST00000484213 ATP7AQ04656 1500 aa6.07□□□□□ -1.44
ABCD3-205ENST00000484213 RIMS1Q86UR5 1692 aaKnown RBP6.07□□□□□ -1.44
ABCD3-205ENST00000484213 SUPT6HQ7KZ85 1726 aaKnown RBP6.07□□□□□ -1.44
ABCD3-205ENST00000484213 ERBINQ96RT1 1412 aa6.07□□□□□ -1.44
ABCD3-205ENST00000484213 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.07□□□□□ -1.44
ABCD3-205ENST00000484213 ZFP91Q96JP5 570 aaPredicted RBP6.07□□□□□ -1.44
ABCD3-205ENST00000484213 ADGBQ8N7X0 1667 aa6.07□□□□□ -1.44
ABCD3-205ENST00000484213 TIMELESSQ9UNS1 1208 aa6.06□□□□□ -1.44
ABCD3-205ENST00000484213 PCDHB13Q9Y5F0 798 aa6.06□□□□□ -1.44
ABCD3-205ENST00000484213 RPGRIP1LQ68CZ1 1315 aa6.06□□□□□ -1.44
ABCD3-205ENST00000484213 FER1L4A9Z1Z3 1794 aa6.06□□□□□ -1.44
ABCD3-205ENST00000484213 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP6.06□□□□□ -1.44
ABCD3-205ENST00000484213 DUOX2Q9NRD8 1548 aa6.06□□□□□ -1.44
ABCD3-205ENST00000484213 PDIA4P13667 645 aaKnown RBP6.06□□□□□ -1.44
ABCD3-205ENST00000484213 PROSER2Q86WR7 435 aaPredicted RBP6.06□□□□□ -1.44
ABCD3-205ENST00000484213 NCOA1Q15788 1441 aa6.06□□□□□ -1.44
ABCD3-205ENST00000484213 SHANK2Q9UPX8 1470 aa6.06□□□□□ -1.44
ABCD3-205ENST00000484213 C1QBPQ07021 282 aaKnown RBP6.06□□□□□ -1.44
ABCD3-205ENST00000484213 KDM5CP41229 1560 aa6.05□□□□□ -1.44
ABCD3-205ENST00000484213 CSPP1Q1MSJ5 1256 aa6.05□□□□□ -1.44
ABCD3-205ENST00000484213 ZNF467Q7Z7K2 595 aaPredicted RBP6.05□□□□□ -1.44
ABCD3-205ENST00000484213 CCDC125Q86Z20 511 aa6.05□□□□□ -1.44
ABCD3-205ENST00000484213 ABCC1P33527 1531 aa6.05□□□□□ -1.44
ABCD3-205ENST00000484213 NPHP4O75161 1426 aaPredicted RBP6.05□□□□□ -1.44
ABCD3-205ENST00000484213 ABCC3O15438 1527 aa6.05□□□□□ -1.44
ABCD3-205ENST00000484213 SPATA31A6Q5VVP1 1343 aa6.05□□□□□ -1.44
ABCD3-205ENST00000484213 PSME1Q06323 249 aa6.04□□□□□ -1.44
ABCD3-205ENST00000484213 PELP1Q8IZL8 1130 aaKnown RBP6.04□□□□□ -1.44
ABCD3-205ENST00000484213 PREX2Q70Z35 1606 aa6.04□□□□□ -1.44
ABCD3-205ENST00000484213 ZC3H13Q5T200 1668 aaKnown RBP6.04□□□□□ -1.44
ABCD3-205ENST00000484213 SETD5Q9C0A6 1442 aa6.04□□□□□ -1.44
ABCD3-205ENST00000484213 TXNDC2Q86VQ3 553 aa6.04□□□□□ -1.44
ABCD3-205ENST00000484213 MADDQ8WXG6 1647 aa6.04□□□□□ -1.44
ABCD3-205ENST00000484213 PZPP20742 1482 aa6.04□□□□□ -1.44
ABCD3-205ENST00000484213 VPS8Q8N3P4 1428 aa6.04□□□□□ -1.44
ABCD3-205ENST00000484213 ARHGEF5Q12774 1597 aa6.04□□□□□ -1.44
ABCD3-205ENST00000484213 PCDHB8Q9UN66 801 aa6.03□□□□□ -1.44
ABCD3-205ENST00000484213 KCNA6P17658 529 aa6.02□□□□□ -1.45
ABCD3-205ENST00000484213 POLR3GLQ9BT43 218 aa6.02□□□□□ -1.45
ABCD3-205ENST00000484213 ARHGAP31Q2M1Z3 1444 aa6.02□□□□□ -1.45
ABCD3-205ENST00000484213 TMC2Q8TDI7 906 aa6.02□□□□□ -1.45
ABCD3-205ENST00000484213 BCL11AQ9H165 835 aa6.02□□□□□ -1.45
ABCD3-205ENST00000484213 EIF2AK4Q9P2K8 1649 aaKnown RBP6.02□□□□□ -1.45
ABCD3-205ENST00000484213 APBB1O00213 710 aa6.02□□□□□ -1.45
ABCD3-205ENST00000484213 MAP3K9P80192 1104 aa6.02□□□□□ -1.45
ABCD3-205ENST00000484213 AFAP1Q8N556 730 aa6.02□□□□□ -1.45
ABCD3-205ENST00000484213 SYNMO15061 1565 aa6.01□□□□□ -1.45
ABCD3-205ENST00000484213 SPATA31D1Q6ZQQ2 1576 aa6.01□□□□□ -1.45
ABCD3-205ENST00000484213 NKTRP30414 1462 aaKnown RBP6.01□□□□□ -1.45
ABCD3-205ENST00000484213 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.01□□□□□ -1.45
ABCD3-205ENST00000484213 HNRNPMP52272 730 aaKnown RBP eCLIP6.01□□□□□ -1.45
ABCD3-205ENST00000484213 FAM50AQ14320 339 aaKnown RBP6.01□□□□□ -1.45
ABCD3-205ENST00000484213 JCADQ9P266 1359 aa6□□□□□ -1.45
ABCD3-205ENST00000484213 ZNF326Q5BKZ1 582 aaKnown RBP6□□□□□ -1.45
ABCD3-205ENST00000484213 SEC24BO95487 1268 aa6□□□□□ -1.45
ABCD3-205ENST00000484213 FBXW7Q969H0 707 aa6□□□□□ -1.45
ABCD3-205ENST00000484213 PRM3Q9NNZ6 103 aa6□□□□□ -1.45
ABCD3-205ENST00000484213 PPRC1Q5VV67 1664 aaKnown RBP6□□□□□ -1.45
ABCD3-205ENST00000484213 MKRN4PQ13434 485 aaPredicted RBP6□□□□□ -1.45
ABCD3-205ENST00000484213 GPIHBP1Q8IV16 184 aa6□□□□□ -1.45
ABCD3-205ENST00000484213 TBX22Q9Y458 520 aa6□□□□□ -1.45
ABCD3-205ENST00000484213 FGD6Q6ZV73 1430 aa6□□□□□ -1.45
ABCD3-205ENST00000484213 SCAF11Q99590 1463 aaKnown RBP6□□□□□ -1.45
ABCD3-205ENST00000484213 LRRC59Q96AG4 307 aaKnown RBP5.99□□□□□ -1.45
ABCD3-205ENST00000484213 GPATCH8Q9UKJ3 1502 aaKnown RBP5.99□□□□□ -1.45
ABCD3-205ENST00000484213 KIF15Q9NS87 1388 aa5.99□□□□□ -1.45
ABCD3-205ENST00000484213 TCOF1Q13428 1488 aaKnown RBP5.99□□□□□ -1.45
ABCD3-205ENST00000484213 CEP170BQ9Y4F5 1589 aaPredicted RBP5.99□□□□□ -1.45
ABCD3-205ENST00000484213 RBM19Q9Y4C8 960 aaKnown RBP5.99□□□□□ -1.45
ABCD3-205ENST00000484213 RICTORQ6R327 1708 aa5.99□□□□□ -1.45
ABCD3-205ENST00000484213 DIP2CQ9Y2E4 1556 aa5.99□□□□□ -1.45
ABCD3-205ENST00000484213 CDK13Q14004 1512 aaKnown RBP5.99□□□□□ -1.45
ABCD3-205ENST00000484213 CCER1Q8TC90 406 aaPredicted RBP5.99□□□□□ -1.45
ABCD3-205ENST00000484213 SLC24A3Q9HC58 644 aa5.99□□□□□ -1.45
ABCD3-205ENST00000484213 UGGT1Q9NYU2 1555 aa5.99□□□□□ -1.45
ABCD3-205ENST00000484213 SAMD9LQ8IVG5 1584 aa5.98□□□□□ -1.45
ABCD3-205ENST00000484213 MAST1Q9Y2H9 1570 aa5.98□□□□□ -1.45
ABCD3-205ENST00000484213 MYO3AQ8NEV4 1616 aa5.98□□□□□ -1.45
ABCD3-205ENST00000484213 HSPA2P54652 639 aa5.98□□□□□ -1.45
ABCD3-205ENST00000484213 PDAP1Q13442 181 aaKnown RBP5.98□□□□□ -1.45
ABCD3-205ENST00000484213 RFX1P22670 979 aa5.98□□□□□ -1.45
ABCD3-205ENST00000484213 PIP4K2BP78356 416 aa5.98□□□□□ -1.45
ABCD3-205ENST00000484213 E2F4Q16254 413 aa5.98□□□□□ -1.45
ABCD3-205ENST00000484213 PTPN23Q9H3S7 1636 aa5.98□□□□□ -1.45
ABCD3-205ENST00000484213 DIP2AQ14689 1571 aa5.97□□□□□ -1.45
ABCD3-205ENST00000484213 TBC1D12O60347 775 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms