RNA–Protein interactions for RNA: ENST00000481849.5

HLA-B-253, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-253ENST00000481849 PYGBP11216 843 aa14.28□□□□□ -0.12
HLA-B-253ENST00000481849 NCOA2Q15596 1464 aa14.28□□□□□ -0.12
HLA-B-253ENST00000481849 PLSCR2Q9NRY7 297 aa14.28□□□□□ -0.12
HLA-B-253ENST00000481849 MBD5Q9P267 1494 aa14.28□□□□□ -0.12
HLA-B-253ENST00000481849 SEC24BO95487 1268 aa14.26□□□□□ -0.13
HLA-B-253ENST00000481849 PLXNC1O60486 1568 aa14.26□□□□□ -0.13
HLA-B-253ENST00000481849 TRIM35Q9UPQ4 493 aa14.25□□□□□ -0.13
HLA-B-253ENST00000481849 CAMSAP2Q08AD1 1489 aa14.25□□□□□ -0.13
HLA-B-253ENST00000481849 NPATQ14207 1427 aa14.24□□□□□ -0.13
HLA-B-253ENST00000481849 VPS8Q8N3P4 1428 aa14.24□□□□□ -0.13
HLA-B-253ENST00000481849 ZNF335Q9H4Z2 1342 aaPredicted RBP14.23□□□□□ -0.13
HLA-B-253ENST00000481849 NCKAP5LQ9HCH0 1330 aa14.23□□□□□ -0.13
HLA-B-253ENST00000481849 KIF3BO15066 747 aa14.23□□□□□ -0.13
HLA-B-253ENST00000481849 GSE1Q14687 1217 aa14.23□□□□□ -0.13
HLA-B-253ENST00000481849 TMEM106CQ9BVX2 250 aa14.23□□□□□ -0.13
HLA-B-253ENST00000481849 CCDC141Q6ZP82 1450 aa14.23□□□□□ -0.13
HLA-B-253ENST00000481849 CLTCQ00610 1675 aaKnown RBP14.23□□□□□ -0.13
HLA-B-253ENST00000481849 RTEL1-TNFRSF6BF6WH68 1400 aa14.23□□□□□ -0.13
HLA-B-253ENST00000481849 NCOA1Q15788 1441 aa14.23□□□□□ -0.13
HLA-B-253ENST00000481849 DHX29Q7Z478 1369 aaKnown RBP14.22□□□□□ -0.13
HLA-B-253ENST00000481849 POTEMA6NI47 508 aa14.22□□□□□ -0.13
HLA-B-253ENST00000481849 KANK4Q5T7N3 995 aaPredicted RBP14.22□□□□□ -0.13
HLA-B-253ENST00000481849 PTPRKQ15262 1439 aa14.22□□□□□ -0.13
HLA-B-253ENST00000481849 LRRC9Q6ZRR7 1453 aa14.2□□□□□ -0.14
HLA-B-253ENST00000481849 CAMSAP1Q5T5Y3 1602 aa14.2□□□□□ -0.14
HLA-B-253ENST00000481849 TSPY4P0CV99 314 aa14.2□□□□□ -0.14
HLA-B-253ENST00000481849 TSPY10P0CW01 314 aa14.2□□□□□ -0.14
HLA-B-253ENST00000481849 SCUBE2Q9NQ36 999 aa14.2□□□□□ -0.14
HLA-B-253ENST00000481849 MROH2AA6NES4 1674 aa14.2□□□□□ -0.14
HLA-B-253ENST00000481849 POTEFA5A3E0 1075 aa14.19□□□□□ -0.14
HLA-B-253ENST00000481849 RSPH4AQ5TD94 716 aa14.19□□□□□ -0.14
HLA-B-253ENST00000481849 FBXO31Q5XUX0 539 aaPredicted RBP14.19□□□□□ -0.14
HLA-B-253ENST00000481849 ADGBQ8N7X0 1667 aa14.19□□□□□ -0.14
HLA-B-253ENST00000481849 SETD1BQ9UPS6 1966 aaKnown RBP14.18□□□□□ -0.14
HLA-B-253ENST00000481849 POTEGQ6S5H5 508 aa14.18□□□□□ -0.14
HLA-B-253ENST00000481849 WASHC2CQ9Y4E1 1318 aa14.17□□□□□ -0.14
HLA-B-253ENST00000481849 IER5LQ5T953 404 aa14.17□□□□□ -0.14
HLA-B-253ENST00000481849 COLQQ9Y215 455 aaPredicted RBP14.17□□□□□ -0.14
HLA-B-253ENST00000481849 TOM1O60784 492 aa14.16□□□□□ -0.14
HLA-B-253ENST00000481849 PCDHB8Q9UN66 801 aa14.16□□□□□ -0.14
HLA-B-253ENST00000481849 MYO3AQ8NEV4 1616 aa14.15□□□□□ -0.14
HLA-B-253ENST00000481849 CEP170BQ9Y4F5 1589 aaPredicted RBP14.15□□□□□ -0.14
HLA-B-253ENST00000481849 TNRQ92752 1358 aa14.14□□□□□ -0.15
HLA-B-253ENST00000481849 PKD2Q13563 968 aa14.13□□□□□ -0.15
HLA-B-253ENST00000481849 ARHGEF5Q12774 1597 aa14.13□□□□□ -0.15
HLA-B-253ENST00000481849 KDM5DQ9BY66 1539 aa14.12□□□□□ -0.15
HLA-B-253ENST00000481849 MYOM3Q5VTT5 1437 aa14.12□□□□□ -0.15
HLA-B-253ENST00000481849 A2ML1A8K2U0 1454 aa14.12□□□□□ -0.15
HLA-B-253ENST00000481849 PLA2R1Q13018 1463 aa14.12□□□□□ -0.15
HLA-B-253ENST00000481849 IFNLR1Q8IU57 520 aaPredicted RBP14.11□□□□□ -0.15
HLA-B-253ENST00000481849 SPOCK2Q92563 424 aa14.11□□□□□ -0.15
HLA-B-253ENST00000481849 PZPP20742 1482 aa14.1□□□□□ -0.15
HLA-B-253ENST00000481849 MAP3K1Q13233 1512 aa14.1□□□□□ -0.15
HLA-B-253ENST00000481849 MIA2Q96PC5 1412 aa14.09□□□□□ -0.15
HLA-B-253ENST00000481849 TCOF1Q13428 1488 aaKnown RBP14.09□□□□□ -0.15
HLA-B-253ENST00000481849 ZNF142P52746 1687 aaPredicted RBP14.09□□□□□ -0.15
HLA-B-253ENST00000481849 ALKQ9UM73 1620 aa14.08□□□□□ -0.15
HLA-B-253ENST00000481849 ZNF467Q7Z7K2 595 aaPredicted RBP14.08□□□□□ -0.16
HLA-B-253ENST00000481849 PLCG2P16885 1265 aa14.07□□□□□ -0.16
HLA-B-253ENST00000481849 CIZ1Q9ULV3 898 aaPredicted RBP14.07□□□□□ -0.16
HLA-B-253ENST00000481849 DNMT1P26358 1616 aaKnown RBP14.07□□□□□ -0.16
HLA-B-253ENST00000481849 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.07□□□□□ -0.16
HLA-B-253ENST00000481849 CHRM1P11229 460 aaPredicted RBP14.06□□□□□ -0.16
HLA-B-253ENST00000481849 FAM163AQ96GL9 167 aaPredicted RBP14.06□□□□□ -0.16
HLA-B-253ENST00000481849 RRP7BPQ9NSQ0 103 aa14.06□□□□□ -0.16
HLA-B-253ENST00000481849 MAST1Q9Y2H9 1570 aa14.05□□□□□ -0.16
HLA-B-253ENST00000481849 PCDH10Q9P2E7 1040 aa14.05□□□□□ -0.16
HLA-B-253ENST00000481849 FAM135AQ9P2D6 1515 aa14.05□□□□□ -0.16
HLA-B-253ENST00000481849 ANKLE2Q86XL3 938 aa14.04□□□□□ -0.16
HLA-B-253ENST00000481849 THEMISQ8N1K5 641 aaPredicted RBP14.04□□□□□ -0.16
HLA-B-253ENST00000481849 RBM33Q96EV2 1170 aaKnown RBP14.04□□□□□ -0.16
HLA-B-253ENST00000481849 ABCC3O15438 1527 aa14.04□□□□□ -0.16
HLA-B-253ENST00000481849 CHIC2Q9UKJ5 165 aa14.03□□□□□ -0.16
HLA-B-253ENST00000481849 KIF15Q9NS87 1388 aa14.03□□□□□ -0.16
HLA-B-253ENST00000481849 ABCC5O15440 1437 aa14.03□□□□□ -0.16
HLA-B-253ENST00000481849 SETBP1Q9Y6X0 1596 aa14.02□□□□□ -0.16
HLA-B-253ENST00000481849 UGGT1Q9NYU2 1555 aa14.01□□□□□ -0.17
HLA-B-253ENST00000481849 NLRP1Q9C000 1473 aa14.01□□□□□ -0.17
HLA-B-253ENST00000481849 RNF17Q9BXT8 1623 aaKnown RBP14.01□□□□□ -0.17
HLA-B-253ENST00000481849 DUOX2Q9NRD8 1548 aa14□□□□□ -0.17
HLA-B-253ENST00000481849 GOLGA2Q08379 1002 aa14□□□□□ -0.17
HLA-B-253ENST00000481849 NEURL4Q96JN8 1562 aa14□□□□□ -0.17
HLA-B-253ENST00000481849 ERVK-7P63135 1459 aa13.99□□□□□ -0.17
HLA-B-253ENST00000481849 DAPK1P53355 1430 aa13.99□□□□□ -0.17
HLA-B-253ENST00000481849 FGD6Q6ZV73 1430 aa13.99□□□□□ -0.17
HLA-B-253ENST00000481849 IRX5P78411 483 aaPredicted RBP13.99□□□□□ -0.17
HLA-B-253ENST00000481849 LCE2DQ5TA82 110 aaPredicted RBP13.99□□□□□ -0.17
HLA-B-253ENST00000481849 PTPN23Q9H3S7 1636 aa13.99□□□□□ -0.17
HLA-B-253ENST00000481849 NPHP4O75161 1426 aaPredicted RBP13.98□□□□□ -0.17
HLA-B-253ENST00000481849 MROH1Q8NDA8 1641 aa13.98□□□□□ -0.17
HLA-B-253ENST00000481849 EIF2AK4Q9P2K8 1649 aaKnown RBP13.98□□□□□ -0.17
HLA-B-253ENST00000481849 OCEL1Q9H607 264 aa13.98□□□□□ -0.17
HLA-B-253ENST00000481849 SHANK2Q9UPX8 1470 aa13.98□□□□□ -0.17
HLA-B-253ENST00000481849 FAM50AQ14320 339 aaKnown RBP13.97□□□□□ -0.17
HLA-B-253ENST00000481849 ERBINQ96RT1 1412 aa13.96□□□□□ -0.18
HLA-B-253ENST00000481849 ZC3H13Q5T200 1668 aaKnown RBP13.95□□□□□ -0.18
HLA-B-253ENST00000481849 ANKRD30AQ9BXX3 1397 aa13.95□□□□□ -0.18
HLA-B-253ENST00000481849 CEP152O94986 1710 aa13.94□□□□□ -0.18
HLA-B-253ENST00000481849 POLR1AO95602 1720 aaPredicted RBP13.94□□□□□ -0.18
HLA-B-253ENST00000481849 PSEN1P49768 467 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms