RNA–Protein interactions for RNA: ENST00000477949.1

USP33-208, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 2

Gene USP33, Length 663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-208ENST00000477949 PLB1Q6P1J6 1458 aa12□□□□□ -0.49
USP33-208ENST00000477949 BBXQ8WY36 941 aaPredicted RBP11.99□□□□□ -0.49
USP33-208ENST00000477949 PHF14O94880 888 aa11.97□□□□□ -0.49
USP33-208ENST00000477949 CAMK2BQ13554 666 aa11.97□□□□□ -0.49
USP33-208ENST00000477949 FBXW7Q969H0 707 aa11.97□□□□□ -0.49
USP33-208ENST00000477949 NBPF3Q9H094 633 aa11.97□□□□□ -0.49
USP33-208ENST00000477949 EPRSP07814 1512 aaKnown RBP11.96□□□□□ -0.49
USP33-208ENST00000477949 TYW1BQ6NUM6 668 aa11.96□□□□□ -0.49
USP33-208ENST00000477949 CUL7Q14999 1698 aa11.96□□□□□ -0.5
USP33-208ENST00000477949 SPATA31D1Q6ZQQ2 1576 aa11.96□□□□□ -0.5
USP33-208ENST00000477949 PPP1R3GB7ZBB8 358 aa11.95□□□□□ -0.5
USP33-208ENST00000477949 THSD4Q6ZMP0 1018 aa11.95□□□□□ -0.5
USP33-208ENST00000477949 WNT2BQ93097 391 aa11.95□□□□□ -0.5
USP33-208ENST00000477949 UHRF1BP1LA0JNW5 1464 aa11.95□□□□□ -0.5
USP33-208ENST00000477949 PTPRGP23470 1445 aa11.94□□□□□ -0.5
USP33-208ENST00000477949 TEX14Q8IWB6 1497 aa11.93□□□□□ -0.5
USP33-208ENST00000477949 RABGEF1Q9UJ41 708 aa11.92□□□□□ -0.5
USP33-208ENST00000477949 COL9A1P20849 921 aa11.91□□□□□ -0.5
USP33-208ENST00000477949 EPAS1Q99814 870 aa11.91□□□□□ -0.5
USP33-208ENST00000477949 KDM5BQ9UGL1 1544 aa11.91□□□□□ -0.5
USP33-208ENST00000477949 DPYSL4O14531 572 aa11.9□□□□□ -0.5
USP33-208ENST00000477949 TNIKQ9UKE5 1360 aa11.89□□□□□ -0.51
USP33-208ENST00000477949 KIF21BO75037 1637 aa11.89□□□□□ -0.51
USP33-208ENST00000477949 PROX2Q3B8N5 592 aa11.88□□□□□ -0.51
USP33-208ENST00000477949 C6orf132Q5T0Z8 1188 aa11.87□□□□□ -0.51
USP33-208ENST00000477949 IFFO2Q5TF58 517 aa11.87□□□□□ -0.51
USP33-208ENST00000477949 SPRYD3Q8NCJ5 442 aa11.87□□□□□ -0.51
USP33-208ENST00000477949 ADAMTSL3P82987 1691 aa11.87□□□□□ -0.51
USP33-208ENST00000477949 UACAQ9BZF9 1416 aa11.86□□□□□ -0.51
USP33-208ENST00000477949 ZCCHC11Q5TAX3 1644 aaKnown RBP11.86□□□□□ -0.51
USP33-208ENST00000477949 ONECUT3O60422 494 aaPredicted RBP11.86□□□□□ -0.51
USP33-208ENST00000477949 PCF11O94913 1555 aaKnown RBP11.85□□□□□ -0.51
USP33-208ENST00000477949 PTPRMP28827 1452 aa11.85□□□□□ -0.51
USP33-208ENST00000477949 LAPTM4BQ86VI4 370 aa11.85□□□□□ -0.51
USP33-208ENST00000477949 IGF1RP08069 1367 aa11.84□□□□□ -0.51
USP33-208ENST00000477949 ANKK1Q8NFD2 765 aa11.84□□□□□ -0.51
USP33-208ENST00000477949 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.84□□□□□ -0.51
USP33-208ENST00000477949 KIAA1468Q9P260 1216 aa11.84□□□□□ -0.51
USP33-208ENST00000477949 MAGI3Q5TCQ9 1506 aa11.84□□□□□ -0.51
USP33-208ENST00000477949 DISP1Q96F81 1524 aa11.84□□□□□ -0.51
USP33-208ENST00000477949 CARMIL2Q6F5E8 1435 aa11.82□□□□□ -0.52
USP33-208ENST00000477949 DDX12PQ92771 950 aa11.81□□□□□ -0.52
USP33-208ENST00000477949 WDR7Q9Y4E6 1490 aa11.81□□□□□ -0.52
USP33-208ENST00000477949 IQGAP2Q13576 1575 aa11.8□□□□□ -0.52
USP33-208ENST00000477949 RBM33Q96EV2 1170 aaKnown RBP11.8□□□□□ -0.52
USP33-208ENST00000477949 CFAP43Q8NDM7 1665 aa11.8□□□□□ -0.52
USP33-208ENST00000477949 TTBK1Q5TCY1 1321 aaPredicted RBP11.79□□□□□ -0.52
USP33-208ENST00000477949 SPDYE16A6NNV3 312 aaPredicted RBP11.78□□□□□ -0.52
USP33-208ENST00000477949 RGS20O76081 388 aa11.78□□□□□ -0.52
USP33-208ENST00000477949 AMER1Q5JTC6 1135 aaPredicted RBP11.78□□□□□ -0.52
USP33-208ENST00000477949 ZFRQ96KR1 1074 aaKnown RBP11.78□□□□□ -0.52
USP33-208ENST00000477949 TRIM6-TRIM34B2RNG4 842 aa11.77□□□□□ -0.53
USP33-208ENST00000477949 ARAP3Q8WWN8 1544 aa11.76□□□□□ -0.53
USP33-208ENST00000477949 SOWAHBA6NEL2 793 aa11.76□□□□□ -0.53
USP33-208ENST00000477949 PDIA6Q15084 440 aa11.76□□□□□ -0.53
USP33-208ENST00000477949 CD109Q6YHK3 1445 aa11.76□□□□□ -0.53
USP33-208ENST00000477949 MADDQ8WXG6 1647 aa11.75□□□□□ -0.53
USP33-208ENST00000477949 BCORL1Q5H9F3 1711 aa11.75□□□□□ -0.53
USP33-208ENST00000477949 BCAMP50895 628 aa11.74□□□□□ -0.53
USP33-208ENST00000477949 E2F4Q16254 413 aa11.74□□□□□ -0.53
USP33-208ENST00000477949 UGGT2Q9NYU1 1516 aa11.74□□□□□ -0.53
USP33-208ENST00000477949 A0A0G2JS52 829 aa11.73□□□□□ -0.53
USP33-208ENST00000477949 KIAA0556O60303 1618 aa11.73□□□□□ -0.53
USP33-208ENST00000477949 EN1Q05925 392 aaPredicted RBP11.73□□□□□ -0.53
USP33-208ENST00000477949 NBR1Q14596 966 aa11.73□□□□□ -0.53
USP33-208ENST00000477949 NYAP1Q6ZVC0 841 aa11.73□□□□□ -0.53
USP33-208ENST00000477949 KIF27Q86VH2 1401 aa11.73□□□□□ -0.53
USP33-208ENST00000477949 CERKQ8TCT0 537 aa11.73□□□□□ -0.53
USP33-208ENST00000477949 WDR70Q9NW82 654 aa11.73□□□□□ -0.53
USP33-208ENST00000477949 SEPT9Q9UHD8 586 aaPredicted RBP11.73□□□□□ -0.53
USP33-208ENST00000477949 MAP3K7O43318 606 aa11.72□□□□□ -0.53
USP33-208ENST00000477949 FAM98CQ17RN3 349 aaKnown RBP11.72□□□□□ -0.53
USP33-208ENST00000477949 CARMIL1Q5VZK9 1371 aa11.71□□□□□ -0.53
USP33-208ENST00000477949 PAXIP1Q6ZW49 1069 aaPredicted RBP11.71□□□□□ -0.53
USP33-208ENST00000477949 PACS2Q86VP3 889 aa11.71□□□□□ -0.53
USP33-208ENST00000477949 CFAP44Q96MT7 982 aa11.71□□□□□ -0.53
USP33-208ENST00000477949 ARIH1Q9Y4X5 557 aaPredicted RBP11.7□□□□□ -0.54
USP33-208ENST00000477949 FRMPD1Q5SYB0 1578 aa11.7□□□□□ -0.54
USP33-208ENST00000477949 ITGBL1O95965 494 aaPredicted RBP11.69□□□□□ -0.54
USP33-208ENST00000477949 TSR1Q2NL82 804 aaKnown RBP11.69□□□□□ -0.54
USP33-208ENST00000477949 WBP1LQ9NX94 342 aa11.69□□□□□ -0.54
USP33-208ENST00000477949 ABCA8O94911 1581 aa11.68□□□□□ -0.54
USP33-208ENST00000477949 HSPA2P54652 639 aa11.68□□□□□ -0.54
USP33-208ENST00000477949 RTN4Q9NQC3 1192 aaKnown RBP11.67□□□□□ -0.54
USP33-208ENST00000477949 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.67□□□□□ -0.54
USP33-208ENST00000477949 RIMS1Q86UR5 1692 aaKnown RBP11.67□□□□□ -0.54
USP33-208ENST00000477949 TSR3Q9UJK0 312 aaKnown RBP11.66□□□□□ -0.54
USP33-208ENST00000477949 TSKSQ9UJT2 592 aa11.66□□□□□ -0.54
USP33-208ENST00000477949 LRCH3Q96II8 777 aa11.65□□□□□ -0.54
USP33-208ENST00000477949 GRXCR2A6NFK2 248 aa11.64□□□□□ -0.55
USP33-208ENST00000477949 PRSS12P56730 875 aa11.63□□□□□ -0.55
USP33-208ENST00000477949 KCNC4Q03721 635 aa11.63□□□□□ -0.55
USP33-208ENST00000477949 CDCA7LQ96GN5 454 aa11.63□□□□□ -0.55
USP33-208ENST00000477949 HPS5Q9UPZ3 1129 aa11.63□□□□□ -0.55
USP33-208ENST00000477949 ABCA9Q8IUA7 1624 aa11.63□□□□□ -0.55
USP33-208ENST00000477949 ARHGEF40Q8TER5 1519 aa11.62□□□□□ -0.55
USP33-208ENST00000477949 SIGLEC1Q9BZZ2 1709 aa11.62□□□□□ -0.55
USP33-208ENST00000477949 PHLDB1Q86UU1 1377 aa11.61□□□□□ -0.55
USP33-208ENST00000477949 RAPGEF3O95398 923 aa11.6□□□□□ -0.55
USP33-208ENST00000477949 IRX2Q9BZI1 471 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms