RNA–Protein interactions for RNA: ENST00000477548.5

DFFB-209, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 2,923 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-209ENST00000477548 XRCC6P12956 609 aaKnown RBP eCLIP17.24■□□□□ 0.35
DFFB-209ENST00000477548 SEC24BO95487 1268 aa17.24■□□□□ 0.35
DFFB-209ENST00000477548 PLEKHH1Q9ULM0 1364 aa17.24■□□□□ 0.35
DFFB-209ENST00000477548 SHROOM2Q13796 1616 aa17.24■□□□□ 0.35
DFFB-209ENST00000477548 ADGBQ8N7X0 1667 aa17.24■□□□□ 0.35
DFFB-209ENST00000477548 CLCN1P35523 988 aa17.24■□□□□ 0.35
DFFB-209ENST00000477548 RRP9O43818 475 aaKnown RBP17.23■□□□□ 0.35
DFFB-209ENST00000477548 TTC37Q6PGP7 1564 aa17.23■□□□□ 0.35
DFFB-209ENST00000477548 CDC42BPBQ9Y5S2 1711 aa17.23■□□□□ 0.35
DFFB-209ENST00000477548 SAMD9LQ8IVG5 1584 aa17.23■□□□□ 0.35
DFFB-209ENST00000477548 GZF1Q9H116 711 aaPredicted RBP17.22■□□□□ 0.35
DFFB-209ENST00000477548 IGHDP01880 384 aa17.2■□□□□ 0.34
DFFB-209ENST00000477548 PANK2Q9BZ23 570 aa17.2■□□□□ 0.34
DFFB-209ENST00000477548 EIF3AQ14152 1382 aaKnown RBP17.2■□□□□ 0.34
DFFB-209ENST00000477548 ANTXR1Q9H6X2 564 aa17.2■□□□□ 0.34
DFFB-209ENST00000477548 UPF2Q9HAU5 1272 aaKnown RBP17.2■□□□□ 0.34
DFFB-209ENST00000477548 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.2■□□□□ 0.34
DFFB-209ENST00000477548 MAPK8IP3Q9UPT6 1336 aa17.19■□□□□ 0.34
DFFB-209ENST00000477548 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.19■□□□□ 0.34
DFFB-209ENST00000477548 SYCP2Q9BX26 1530 aa17.18■□□□□ 0.34
DFFB-209ENST00000477548 NBPF1Q3BBV0 1214 aa17.18■□□□□ 0.34
DFFB-209ENST00000477548 SLFN5Q08AF3 891 aa17.18■□□□□ 0.34
DFFB-209ENST00000477548 ARHGAP5Q13017 1502 aa17.18■□□□□ 0.34
DFFB-209ENST00000477548 DISP3Q9P2K9 1392 aa17.17■□□□□ 0.34
DFFB-209ENST00000477548 ABCC2Q92887 1545 aa17.17■□□□□ 0.34
DFFB-209ENST00000477548 FSD2A1L4K1 749 aa17.17■□□□□ 0.34
DFFB-209ENST00000477548 BCAR3O75815 825 aa17.17■□□□□ 0.34
DFFB-209ENST00000477548 ZNF521Q96K83 1311 aa17.17■□□□□ 0.34
DFFB-209ENST00000477548 SPRYD3Q8NCJ5 442 aa17.16■□□□□ 0.34
DFFB-209ENST00000477548 COL17A1Q9UMD9 1497 aaPredicted RBP17.16■□□□□ 0.34
DFFB-209ENST00000477548 RGL3Q3MIN7 710 aa17.15■□□□□ 0.34
DFFB-209ENST00000477548 PREX2Q70Z35 1606 aa17.15■□□□□ 0.34
DFFB-209ENST00000477548 TBC1D2Q9BYX2 928 aa17.15■□□□□ 0.34
DFFB-209ENST00000477548 CCDC141Q6ZP82 1450 aa17.14■□□□□ 0.34
DFFB-209ENST00000477548 SHANK2Q9UPX8 1470 aa17.14■□□□□ 0.34
DFFB-209ENST00000477548 MCM4P33991 863 aa17.14■□□□□ 0.33
DFFB-209ENST00000477548 TMF1P82094 1093 aa17.14■□□□□ 0.33
DFFB-209ENST00000477548 VIRMAQ69YN4 1812 aaKnown RBP17.13■□□□□ 0.33
DFFB-209ENST00000477548 CLASP1Q7Z460 1538 aa17.13■□□□□ 0.33
DFFB-209ENST00000477548 CANXP27824 592 aaKnown RBP17.13■□□□□ 0.33
DFFB-209ENST00000477548 PPP2R1AP30153 589 aa17.13■□□□□ 0.33
DFFB-209ENST00000477548 TESK2Q96S53 571 aa17.13■□□□□ 0.33
DFFB-209ENST00000477548 PRAG1Q86YV5 1406 aa17.13■□□□□ 0.33
DFFB-209ENST00000477548 CGNL1Q0VF96 1302 aa17.13■□□□□ 0.33
DFFB-209ENST00000477548 MRE11P49959 708 aa17.12■□□□□ 0.33
DFFB-209ENST00000477548 CCDC146Q8IYE0 955 aa17.12■□□□□ 0.33
DFFB-209ENST00000477548 ERBINQ96RT1 1412 aa17.11■□□□□ 0.33
DFFB-209ENST00000477548 CLUAP1Q96AJ1 413 aa17.11■□□□□ 0.33
DFFB-209ENST00000477548 KNSTRNQ9Y448 316 aa17.11■□□□□ 0.33
DFFB-209ENST00000477548 TAF7LQ5H9L4 462 aa17.11■□□□□ 0.33
DFFB-209ENST00000477548 TBC1D32Q96NH3 1257 aa17.11■□□□□ 0.33
DFFB-209ENST00000477548 MYH16Q9H6N6 1097 aa17.11■□□□□ 0.33
DFFB-209ENST00000477548 NKTRP30414 1462 aaKnown RBP17.11■□□□□ 0.33
DFFB-209ENST00000477548 NLRP1Q9C000 1473 aa17.11■□□□□ 0.33
DFFB-209ENST00000477548 TRAK2O60296 914 aa17.1■□□□□ 0.33
DFFB-209ENST00000477548 SPINK5Q9NQ38 1064 aaPredicted RBP17.1■□□□□ 0.33
DFFB-209ENST00000477548 ARHGEF5Q12774 1597 aa17.1■□□□□ 0.33
DFFB-209ENST00000477548 TRPM1Q7Z4N2 1603 aa17.09■□□□□ 0.33
DFFB-209ENST00000477548 COG6Q9Y2V7 657 aa17.09■□□□□ 0.33
DFFB-209ENST00000477548 ZCCHC11Q5TAX3 1644 aaKnown RBP17.09■□□□□ 0.33
DFFB-209ENST00000477548 KDM5DQ9BY66 1539 aa17.09■□□□□ 0.33
DFFB-209ENST00000477548 ESPNB1AK53 854 aa17.09■□□□□ 0.33
DFFB-209ENST00000477548 TRMT2AQ8IZ69 625 aaKnown RBP17.09■□□□□ 0.33
DFFB-209ENST00000477548 AFAP1Q8N556 730 aa17.08■□□□□ 0.33
DFFB-209ENST00000477548 PDE3AQ14432 1141 aa17.07■□□□□ 0.32
DFFB-209ENST00000477548 PANK1Q8TE04 598 aa17.07■□□□□ 0.32
DFFB-209ENST00000477548 APAF1O14727 1248 aa17.07■□□□□ 0.32
DFFB-209ENST00000477548 E9PSI1 815 aa17.07■□□□□ 0.32
DFFB-209ENST00000477548 TRIM44Q96DX7 344 aaPredicted RBP17.07■□□□□ 0.32
DFFB-209ENST00000477548 GRPEL1Q9HAV7 217 aa17.07■□□□□ 0.32
DFFB-209ENST00000477548 CHMP5Q9NZZ3 219 aa17.07■□□□□ 0.32
DFFB-209ENST00000477548 GPRASP1Q5JY77 1395 aa17.07■□□□□ 0.32
DFFB-209ENST00000477548 CCDC144AA2RUR9 1427 aa17.06■□□□□ 0.32
DFFB-209ENST00000477548 TRAPPC8Q9Y2L5 1435 aa17.06■□□□□ 0.32
DFFB-209ENST00000477548 FAM135AQ9P2D6 1515 aa17.05■□□□□ 0.32
DFFB-209ENST00000477548 PLPPR3Q6T4P5 718 aa17.05■□□□□ 0.32
DFFB-209ENST00000477548 CENPJQ9HC77 1338 aaPredicted RBP17.04■□□□□ 0.32
DFFB-209ENST00000477548 MYO5CQ9NQX4 1742 aa17.04■□□□□ 0.32
DFFB-209ENST00000477548 PMFBP1Q8TBY8 1022 aa17.03■□□□□ 0.32
DFFB-209ENST00000477548 PLCH2O75038 1416 aa17.03■□□□□ 0.32
DFFB-209ENST00000477548 RSPH4AQ5TD94 716 aa17.03■□□□□ 0.32
DFFB-209ENST00000477548 ERBB4Q15303 1308 aa17.03■□□□□ 0.32
DFFB-209ENST00000477548 EFCAB2Q5VUJ9 269 aa17.02■□□□□ 0.32
DFFB-209ENST00000477548 PRDM15P57071 1507 aaPredicted RBP17.02■□□□□ 0.31
DFFB-209ENST00000477548 NINLQ9Y2I6 1382 aa17.01■□□□□ 0.31
DFFB-209ENST00000477548 DDX11L8A8MPP1 907 aa17.01■□□□□ 0.31
DFFB-209ENST00000477548 PDZRN3Q9UPQ7 1066 aa17.01■□□□□ 0.31
DFFB-209ENST00000477548 PLA2R1Q13018 1463 aa17.01■□□□□ 0.31
DFFB-209ENST00000477548 TPM2P07951 284 aa17■□□□□ 0.31
DFFB-209ENST00000477548 AMER1Q5JTC6 1135 aaPredicted RBP17■□□□□ 0.31
DFFB-209ENST00000477548 MAGI2Q86UL8 1455 aa17■□□□□ 0.31
DFFB-209ENST00000477548 PAXIP1Q6ZW49 1069 aaPredicted RBP17■□□□□ 0.31
DFFB-209ENST00000477548 ISY1Q9ULR0 285 aaKnown RBP17■□□□□ 0.31
DFFB-209ENST00000477548 DMRT2Q9Y5R5 561 aa16.99■□□□□ 0.31
DFFB-209ENST00000477548 A2MP01023 1474 aa16.98■□□□□ 0.31
DFFB-209ENST00000477548 C22orf23Q9BZE7 217 aa16.98■□□□□ 0.31
DFFB-209ENST00000477548 UHRF1BP1LA0JNW5 1464 aa16.97■□□□□ 0.31
DFFB-209ENST00000477548 MFAP1P55081 439 aaKnown RBP16.97■□□□□ 0.31
DFFB-209ENST00000477548 PCDHB15Q9Y5E8 787 aa16.97■□□□□ 0.31
DFFB-209ENST00000477548 DHX37Q8IY37 1157 aaKnown RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms