RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 PRR29P0C7W0 189 aa4.17□□□□□ -1.74
HMGN4-202ENST00000477243 CLCN1P35523 988 aa4.17□□□□□ -1.74
HMGN4-202ENST00000477243 RGS19P49795 217 aa4.17□□□□□ -1.74
HMGN4-202ENST00000477243 EFCAB3Q8N7B9 438 aa4.17□□□□□ -1.74
HMGN4-202ENST00000477243 ZNF579Q8NAF0 562 aaKnown RBP4.17□□□□□ -1.74
HMGN4-202ENST00000477243 OXER1Q8TDS5 423 aa4.17□□□□□ -1.74
HMGN4-202ENST00000477243 GLMNQ92990 594 aa4.17□□□□□ -1.74
HMGN4-202ENST00000477243 GCC1Q96CN9 775 aa4.17□□□□□ -1.74
HMGN4-202ENST00000477243 SIRT1Q96EB6 747 aa4.17□□□□□ -1.74
HMGN4-202ENST00000477243 PHF8Q9UPP1 1060 aa4.17□□□□□ -1.74
HMGN4-202ENST00000477243 HMGXB3Q12766 1538 aa4.16□□□□□ -1.74
HMGN4-202ENST00000477243 CADPSQ9ULU8 1353 aa4.16□□□□□ -1.74
HMGN4-202ENST00000477243 DPYSL4O14531 572 aa4.16□□□□□ -1.74
HMGN4-202ENST00000477243 SREK1Q8WXA9 508 aaKnown RBP4.16□□□□□ -1.74
HMGN4-202ENST00000477243 MRRFQ96E11 262 aaKnown RBP4.16□□□□□ -1.74
HMGN4-202ENST00000477243 C8orf37Q96NL8 207 aa4.16□□□□□ -1.74
HMGN4-202ENST00000477243 GNEQ9Y223 722 aaKnown RBP4.16□□□□□ -1.74
HMGN4-202ENST00000477243 SMARCA5O60264 1052 aaPredicted RBP4.15□□□□□ -1.75
HMGN4-202ENST00000477243 C1QBPQ07021 282 aaKnown RBP4.15□□□□□ -1.75
HMGN4-202ENST00000477243 DIXDC1Q155Q3 683 aa4.15□□□□□ -1.75
HMGN4-202ENST00000477243 PPP1R15BQ5SWA1 713 aa4.15□□□□□ -1.75
HMGN4-202ENST00000477243 DHX37Q8IY37 1157 aaKnown RBP4.15□□□□□ -1.75
HMGN4-202ENST00000477243 FAM9AQ8IZU1 332 aaPredicted RBP4.15□□□□□ -1.75
HMGN4-202ENST00000477243 PROCA1Q8NCQ7 364 aaPredicted RBP4.15□□□□□ -1.75
HMGN4-202ENST00000477243 CCER1Q8TC90 406 aaPredicted RBP4.15□□□□□ -1.75
HMGN4-202ENST00000477243 UBE2Q2Q8WVN8 375 aa4.15□□□□□ -1.75
HMGN4-202ENST00000477243 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.15□□□□□ -1.75
HMGN4-202ENST00000477243 CWC22Q9HCG8 908 aaKnown RBP4.15□□□□□ -1.75
HMGN4-202ENST00000477243 PCDHB8Q9UN66 801 aa4.15□□□□□ -1.75
HMGN4-202ENST00000477243 PCDHB13Q9Y5F0 798 aa4.15□□□□□ -1.75
HMGN4-202ENST00000477243 NACADO15069 1562 aa4.14□□□□□ -1.75
HMGN4-202ENST00000477243 FER1L4A9Z1Z3 1794 aa4.14□□□□□ -1.75
HMGN4-202ENST00000477243 CCDC180Q9P1Z9 1646 aa4.14□□□□□ -1.75
HMGN4-202ENST00000477243 TCF3P15923 654 aa4.14□□□□□ -1.75
HMGN4-202ENST00000477243 SSTR3P32745 418 aaPredicted RBP4.14□□□□□ -1.75
HMGN4-202ENST00000477243 SF3A1Q15459 793 aaKnown RBP4.14□□□□□ -1.75
HMGN4-202ENST00000477243 UBXN4Q92575 508 aa4.14□□□□□ -1.75
HMGN4-202ENST00000477243 PSMD1Q99460 953 aa4.14□□□□□ -1.75
HMGN4-202ENST00000477243 GDPD2Q9HCC8 539 aa4.14□□□□□ -1.75
HMGN4-202ENST00000477243 CABP2Q9NPB3 220 aa4.14□□□□□ -1.75
HMGN4-202ENST00000477243 GPCPD1Q9NPB8 672 aa4.14□□□□□ -1.75
HMGN4-202ENST00000477243 GPHNQ9NQX3 736 aaPredicted RBP4.14□□□□□ -1.75
HMGN4-202ENST00000477243 SNRKQ9NRH2 765 aa4.14□□□□□ -1.75
HMGN4-202ENST00000477243 POLR3EQ9NVU0 708 aa4.14□□□□□ -1.75
HMGN4-202ENST00000477243 GRXCR2A6NFK2 248 aa4.13□□□□□ -1.75
HMGN4-202ENST00000477243 CLSTN1O94985 981 aa4.13□□□□□ -1.75
HMGN4-202ENST00000477243 RFX1P22670 979 aa4.13□□□□□ -1.75
HMGN4-202ENST00000477243 RFC5P40937 340 aa4.13□□□□□ -1.75
HMGN4-202ENST00000477243 CC2D2BQ6DHV5 1058 aa4.13□□□□□ -1.75
HMGN4-202ENST00000477243 CERS3Q8IU89 383 aa4.13□□□□□ -1.75
HMGN4-202ENST00000477243 BEGAINQ9BUH8 593 aa4.13□□□□□ -1.75
HMGN4-202ENST00000477243 BCL11AQ9H165 835 aa4.13□□□□□ -1.75
HMGN4-202ENST00000477243 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.12□□□□□ -1.75
HMGN4-202ENST00000477243 ABL2P42684 1182 aa4.12□□□□□ -1.75
HMGN4-202ENST00000477243 ZC3H6P61129 1189 aaKnown RBP4.12□□□□□ -1.75
HMGN4-202ENST00000477243 SRPK2P78362 688 aaKnown RBP4.12□□□□□ -1.75
HMGN4-202ENST00000477243 HDGFL1Q5TGJ6 251 aa4.12□□□□□ -1.75
HMGN4-202ENST00000477243 TMUB1Q9BVT8 246 aa4.12□□□□□ -1.75
HMGN4-202ENST00000477243 RNF39Q9H2S5 420 aa4.12□□□□□ -1.75
HMGN4-202ENST00000477243 KIAA1522Q9P206 1035 aaPredicted RBP4.12□□□□□ -1.75
HMGN4-202ENST00000477243 UNC13AQ9UPW8 1703 aa4.12□□□□□ -1.75
HMGN4-202ENST00000477243 ANKRD62A6NC57 917 aa4.11□□□□□ -1.75
HMGN4-202ENST00000477243 FECHP22830 423 aa4.11□□□□□ -1.75
HMGN4-202ENST00000477243 CLK2P49760 499 aaKnown RBP4.11□□□□□ -1.75
HMGN4-202ENST00000477243 WASHC4Q2M389 1173 aa4.11□□□□□ -1.75
HMGN4-202ENST00000477243 ZNF326Q5BKZ1 582 aaKnown RBP4.11□□□□□ -1.75
HMGN4-202ENST00000477243 PPP2R2DQ66LE6 453 aa4.11□□□□□ -1.75
HMGN4-202ENST00000477243 TXNDC2Q86VQ3 553 aa4.11□□□□□ -1.75
HMGN4-202ENST00000477243 REPIN1Q9BWE0 567 aaKnown RBP4.11□□□□□ -1.75
HMGN4-202ENST00000477243 EMILIN3Q9NT22 766 aa4.11□□□□□ -1.75
HMGN4-202ENST00000477243 CHD4Q14839 1912 aa4.11□□□□□ -1.75
HMGN4-202ENST00000477243 PTPRMP28827 1452 aa4.11□□□□□ -1.75
HMGN4-202ENST00000477243 ZNF462Q96JM2 2506 aa4.1□□□□□ -1.75
HMGN4-202ENST00000477243 ATG7O95352 703 aa4.1□□□□□ -1.75
HMGN4-202ENST00000477243 ZNF16P17020 682 aaPredicted RBP4.1□□□□□ -1.75
HMGN4-202ENST00000477243 OSBPP22059 807 aa4.1□□□□□ -1.75
HMGN4-202ENST00000477243 DSG3P32926 999 aa4.1□□□□□ -1.75
HMGN4-202ENST00000477243 TAF7LQ5H9L4 462 aa4.1□□□□□ -1.75
HMGN4-202ENST00000477243 CFAP70Q5T0N1 1121 aa4.1□□□□□ -1.75
HMGN4-202ENST00000477243 PRPF38BQ5VTL8 546 aaKnown RBP4.1□□□□□ -1.75
HMGN4-202ENST00000477243 MYSM1Q5VVJ2 828 aa4.1□□□□□ -1.75
HMGN4-202ENST00000477243 BCL2L13Q9BXK5 485 aa4.1□□□□□ -1.75
HMGN4-202ENST00000477243 PPP1R12CQ9BZL4 782 aa4.1□□□□□ -1.75
HMGN4-202ENST00000477243 TSPYL2Q9H2G4 693 aaPredicted RBP4.1□□□□□ -1.75
HMGN4-202ENST00000477243 BCCIPQ9P287 314 aaKnown RBP eCLIP4.1□□□□□ -1.75
HMGN4-202ENST00000477243 TRANK1O15050 2925 aa4.1□□□□□ -1.75
HMGN4-202ENST00000477243 POM121CA8CG34 1229 aa4.09□□□□□ -1.75
HMGN4-202ENST00000477243 VAMP1P23763 118 aa4.09□□□□□ -1.75
HMGN4-202ENST00000477243 MAP3K9P80192 1104 aa4.09□□□□□ -1.75
HMGN4-202ENST00000477243 PTGDRQ13258 359 aa4.09□□□□□ -1.75
HMGN4-202ENST00000477243 MTMR14Q8NCE2 650 aa4.09□□□□□ -1.75
HMGN4-202ENST00000477243 HIRIP3Q9BW71 556 aaPredicted RBP4.09□□□□□ -1.75
HMGN4-202ENST00000477243 CLEC11AQ9Y240 323 aa4.09□□□□□ -1.75
HMGN4-202ENST00000477243 ZC3H4Q9UPT8 1303 aaKnown RBP4.09□□□□□ -1.75
HMGN4-202ENST00000477243 TMEM88BA6NKF7 163 aa4.08□□□□□ -1.76
HMGN4-202ENST00000477243 ARID4AP29374 1257 aaPredicted RBP4.08□□□□□ -1.76
HMGN4-202ENST00000477243 LMOD1P29536 600 aaPredicted RBP4.08□□□□□ -1.76
HMGN4-202ENST00000477243 PTGER2P43116 358 aa4.08□□□□□ -1.76
HMGN4-202ENST00000477243 HSPA2P54652 639 aa4.08□□□□□ -1.76
HMGN4-202ENST00000477243 MDM2Q00987 491 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms