RNA–Protein interactions for RNA: ENST00000476916.5

KPNA1-206, Transcript of karyopherin subunit alpha 1, humanhuman

TSL 4

Gene KPNA1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-206ENST00000476916 C9orf84Q5VXU9 1444 aa12.5□□□□□ -0.41
KPNA1-206ENST00000476916 ATP10AO60312 1499 aa12.5□□□□□ -0.41
KPNA1-206ENST00000476916 VWDEQ8N2E2 1590 aa12.5□□□□□ -0.41
KPNA1-206ENST00000476916 SUPT6HQ7KZ85 1726 aaKnown RBP12.5□□□□□ -0.41
KPNA1-206ENST00000476916 C1QTNF8P60827 252 aa12.49□□□□□ -0.41
KPNA1-206ENST00000476916 SMYD5Q6GMV2 418 aa12.49□□□□□ -0.41
KPNA1-206ENST00000476916 CRISPLD2Q9H0B8 497 aa12.49□□□□□ -0.41
KPNA1-206ENST00000476916 HECW1Q76N89 1606 aa12.48□□□□□ -0.41
KPNA1-206ENST00000476916 MS4A4AQ96JQ5 239 aa12.48□□□□□ -0.41
KPNA1-206ENST00000476916 ZNF142P52746 1687 aaPredicted RBP12.48□□□□□ -0.41
KPNA1-206ENST00000476916 IQGAP2Q13576 1575 aa12.47□□□□□ -0.41
KPNA1-206ENST00000476916 BARGINQ6ZT62 677 aa12.46□□□□□ -0.41
KPNA1-206ENST00000476916 RGS12O14924 1447 aa12.45□□□□□ -0.42
KPNA1-206ENST00000476916 NPATQ14207 1427 aa12.45□□□□□ -0.42
KPNA1-206ENST00000476916 FAM135BQ49AJ0 1406 aa12.45□□□□□ -0.42
KPNA1-206ENST00000476916 HRCP23327 699 aa12.44□□□□□ -0.42
KPNA1-206ENST00000476916 CAMK2BQ13554 666 aa12.44□□□□□ -0.42
KPNA1-206ENST00000476916 NHSL1Q5SYE7 1610 aa12.44□□□□□ -0.42
KPNA1-206ENST00000476916 NUTM2BA6NNL0 878 aaPredicted RBP12.43□□□□□ -0.42
KPNA1-206ENST00000476916 NUTM2EB1AL46 878 aaPredicted RBP12.43□□□□□ -0.42
KPNA1-206ENST00000476916 NUTM2DQ5VT03 806 aaPredicted RBP12.43□□□□□ -0.42
KPNA1-206ENST00000476916 NUTM2AQ8IVF1 878 aaPredicted RBP12.43□□□□□ -0.42
KPNA1-206ENST00000476916 DDX27Q96GQ7 796 aaKnown RBP12.43□□□□□ -0.42
KPNA1-206ENST00000476916 NEURL4Q96JN8 1562 aa12.42□□□□□ -0.42
KPNA1-206ENST00000476916 ATAD2Q6PL18 1390 aa12.42□□□□□ -0.42
KPNA1-206ENST00000476916 LRP6O75581 1613 aa12.41□□□□□ -0.42
KPNA1-206ENST00000476916 NPM2Q86SE8 214 aaKnown RBP12.41□□□□□ -0.42
KPNA1-206ENST00000476916 CEP170BQ9Y4F5 1589 aaPredicted RBP12.41□□□□□ -0.42
KPNA1-206ENST00000476916 MYO3AQ8NEV4 1616 aa12.4□□□□□ -0.42
KPNA1-206ENST00000476916 ABCA8O94911 1581 aa12.4□□□□□ -0.42
KPNA1-206ENST00000476916 EP400Q96L91 3159 aa12.4□□□□□ -0.42
KPNA1-206ENST00000476916 AK7Q96M32 723 aa12.4□□□□□ -0.42
KPNA1-206ENST00000476916 POLR1AO95602 1720 aaPredicted RBP12.39□□□□□ -0.43
KPNA1-206ENST00000476916 STRCP1A6NGW2 1772 aa12.38□□□□□ -0.43
KPNA1-206ENST00000476916 ZNF784Q8NCA9 323 aaPredicted RBP12.38□□□□□ -0.43
KPNA1-206ENST00000476916 JCADQ9P266 1359 aa12.38□□□□□ -0.43
KPNA1-206ENST00000476916 SYNMO15061 1565 aa12.38□□□□□ -0.43
KPNA1-206ENST00000476916 ESF1Q9H501 851 aaKnown RBP12.37□□□□□ -0.43
KPNA1-206ENST00000476916 GPBP1L1Q9HC44 474 aaPredicted RBP12.37□□□□□ -0.43
KPNA1-206ENST00000476916 BIVM-ERCC5R4GMW8 1640 aa12.37□□□□□ -0.43
KPNA1-206ENST00000476916 CDK13Q14004 1512 aaKnown RBP12.37□□□□□ -0.43
KPNA1-206ENST00000476916 MEX3CQ5U5Q3 659 aaKnown RBP12.36□□□□□ -0.43
KPNA1-206ENST00000476916 IL27Q8NEV9 243 aa12.36□□□□□ -0.43
KPNA1-206ENST00000476916 CFAP74Q9C0B2 1584 aa12.35□□□□□ -0.43
KPNA1-206ENST00000476916 UGGT2Q9NYU1 1516 aa12.34□□□□□ -0.43
KPNA1-206ENST00000476916 CNTLNQ9NXG0 1405 aa12.34□□□□□ -0.43
KPNA1-206ENST00000476916 AGLP35573 1532 aa12.33□□□□□ -0.44
KPNA1-206ENST00000476916 ROBO1Q9Y6N7 1651 aa12.33□□□□□ -0.44
KPNA1-206ENST00000476916 CCDC125Q86Z20 511 aa12.33□□□□□ -0.44
KPNA1-206ENST00000476916 PIP4P2Q8N4L2 257 aa12.32□□□□□ -0.44
KPNA1-206ENST00000476916 GOLGA2Q08379 1002 aa12.31□□□□□ -0.44
KPNA1-206ENST00000476916 PHF12Q96QT6 1004 aa12.31□□□□□ -0.44
KPNA1-206ENST00000476916 TMEM106CQ9BVX2 250 aa12.31□□□□□ -0.44
KPNA1-206ENST00000476916 KDM4CQ9H3R0 1056 aa12.31□□□□□ -0.44
KPNA1-206ENST00000476916 ARID3AQ99856 593 aa12.3□□□□□ -0.44
KPNA1-206ENST00000476916 SPATA31A6Q5VVP1 1343 aa12.3□□□□□ -0.44
KPNA1-206ENST00000476916 IGF1RP08069 1367 aa12.3□□□□□ -0.44
KPNA1-206ENST00000476916 MROH2AA6NES4 1674 aa12.29□□□□□ -0.44
KPNA1-206ENST00000476916 C1orf115Q9H7X2 142 aa12.29□□□□□ -0.44
KPNA1-206ENST00000476916 ATP10BO94823 1461 aa12.28□□□□□ -0.44
KPNA1-206ENST00000476916 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.28□□□□□ -0.44
KPNA1-206ENST00000476916 MLLT3P42568 568 aaPredicted RBP12.28□□□□□ -0.44
KPNA1-206ENST00000476916 RBM6P78332 1123 aaKnown RBP12.28□□□□□ -0.44
KPNA1-206ENST00000476916 RBM26Q5T8P6 1007 aaKnown RBP12.28□□□□□ -0.44
KPNA1-206ENST00000476916 DNMT1P26358 1616 aaKnown RBP12.27□□□□□ -0.44
KPNA1-206ENST00000476916 CD44P16070 742 aaKnown RBP12.27□□□□□ -0.45
KPNA1-206ENST00000476916 MKRN3Q13064 507 aaKnown RBP12.27□□□□□ -0.45
KPNA1-206ENST00000476916 CHRDL2Q6WN34 429 aa12.27□□□□□ -0.45
KPNA1-206ENST00000476916 PHLPP1O60346 1717 aa12.27□□□□□ -0.45
KPNA1-206ENST00000476916 XIRP1Q702N8 1843 aaKnown RBP12.27□□□□□ -0.45
KPNA1-206ENST00000476916 BCL9LQ86UU0 1499 aa12.27□□□□□ -0.45
KPNA1-206ENST00000476916 REREQ9P2R6 1566 aa12.26□□□□□ -0.45
KPNA1-206ENST00000476916 GPIHBP1Q8IV16 184 aa12.26□□□□□ -0.45
KPNA1-206ENST00000476916 KRI1Q8N9T8 703 aaKnown RBP12.26□□□□□ -0.45
KPNA1-206ENST00000476916 GPHNQ9NQX3 736 aaPredicted RBP12.26□□□□□ -0.45
KPNA1-206ENST00000476916 ARID3CA6NKF2 412 aa12.25□□□□□ -0.45
KPNA1-206ENST00000476916 PPP1R15BQ5SWA1 713 aa12.25□□□□□ -0.45
KPNA1-206ENST00000476916 ZMYM3Q14202 1370 aa12.25□□□□□ -0.45
KPNA1-206ENST00000476916 KDM5CP41229 1560 aa12.24□□□□□ -0.45
KPNA1-206ENST00000476916 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.24□□□□□ -0.45
KPNA1-206ENST00000476916 NWD1Q149M9 1564 aa12.23□□□□□ -0.45
KPNA1-206ENST00000476916 A2ML1A8K2U0 1454 aa12.23□□□□□ -0.45
KPNA1-206ENST00000476916 SCAPERQ9BY12 1400 aa12.23□□□□□ -0.45
KPNA1-206ENST00000476916 AFF2P51816 1311 aa12.23□□□□□ -0.45
KPNA1-206ENST00000476916 PSDA5PKW4 1024 aaPredicted RBP12.23□□□□□ -0.45
KPNA1-206ENST00000476916 TRIM66O15016 1216 aa12.23□□□□□ -0.45
KPNA1-206ENST00000476916 TRPC6Q9Y210 931 aa12.23□□□□□ -0.45
KPNA1-206ENST00000476916 PRELPP51888 382 aa12.22□□□□□ -0.45
KPNA1-206ENST00000476916 PDE4DQ08499 809 aa12.22□□□□□ -0.45
KPNA1-206ENST00000476916 MED14O60244 1454 aa12.21□□□□□ -0.45
KPNA1-206ENST00000476916 NPHP4O75161 1426 aaPredicted RBP12.21□□□□□ -0.45
KPNA1-206ENST00000476916 DIP2CQ9Y2E4 1556 aa12.21□□□□□ -0.46
KPNA1-206ENST00000476916 COL16A1Q07092 1604 aaPredicted RBP12.2□□□□□ -0.46
KPNA1-206ENST00000476916 SPDYE16A6NNV3 312 aaPredicted RBP12.2□□□□□ -0.46
KPNA1-206ENST00000476916 MS4A3Q96HJ5 214 aa12.2□□□□□ -0.46
KPNA1-206ENST00000476916 QTRT2Q9H974 415 aaKnown RBP12.2□□□□□ -0.46
KPNA1-206ENST00000476916 FGD6Q6ZV73 1430 aa12.2□□□□□ -0.46
KPNA1-206ENST00000476916 EMILIN3Q9NT22 766 aa12.19□□□□□ -0.46
KPNA1-206ENST00000476916 PDIA6Q15084 440 aa12.18□□□□□ -0.46
KPNA1-206ENST00000476916 ANKLE2Q86XL3 938 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms