RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 LTKP29376 864 aa21.41■■□□□ 1.02
ABCF3-211ENST00000475728 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.41■■□□□ 1.02
ABCF3-211ENST00000475728 TMEM131LA2VDJ0 1609 aa21.4■■□□□ 1.02
ABCF3-211ENST00000475728 IQGAP1P46940 1657 aa21.38■■□□□ 1.01
ABCF3-211ENST00000475728 ZNF335Q9H4Z2 1342 aaPredicted RBP21.38■■□□□ 1.01
ABCF3-211ENST00000475728 RIMS2Q9UQ26 1411 aa21.38■■□□□ 1.01
ABCF3-211ENST00000475728 PPP1R15AO75807 674 aaPredicted RBP21.37■■□□□ 1.01
ABCF3-211ENST00000475728 ZFYVE9O95405 1425 aa21.36■■□□□ 1.01
ABCF3-211ENST00000475728 MED1Q15648 1581 aaPredicted RBP21.33■■□□□ 1.01
ABCF3-211ENST00000475728 ZNF326Q5BKZ1 582 aaKnown RBP21.32■■□□□ 1
ABCF3-211ENST00000475728 BCANQ96GW7 911 aa21.32■■□□□ 1
ABCF3-211ENST00000475728 CLTCL1P53675 1640 aa21.32■■□□□ 1
ABCF3-211ENST00000475728 PLEKHG1Q9ULL1 1385 aa21.32■■□□□ 1
ABCF3-211ENST00000475728 CCDC144AA2RUR9 1427 aa21.31■■□□□ 1
ABCF3-211ENST00000475728 FOXD1Q16676 465 aa21.31■■□□□ 1
ABCF3-211ENST00000475728 CPS1P31327 1500 aa21.29■■□□□ 1
ABCF3-211ENST00000475728 MYO5BQ9ULV0 1848 aa21.29■■□□□ 1
ABCF3-211ENST00000475728 RPGRIP1LQ68CZ1 1315 aa21.27■□□□□ 0.99
ABCF3-211ENST00000475728 SCAF1Q9H7N4 1312 aaKnown RBP21.27■□□□□ 0.99
ABCF3-211ENST00000475728 HSPA1LP34931 641 aa21.26■□□□□ 0.99
ABCF3-211ENST00000475728 KIF1BO60333 1816 aa21.26■□□□□ 0.99
ABCF3-211ENST00000475728 TRIM26Q12899 539 aaPredicted RBP21.25■□□□□ 0.99
ABCF3-211ENST00000475728 SLC26A8Q96RN1 970 aa21.25■□□□□ 0.99
ABCF3-211ENST00000475728 NUTM2DQ5VT03 806 aaPredicted RBP21.23■□□□□ 0.99
ABCF3-211ENST00000475728 TBX22Q9Y458 520 aa21.23■□□□□ 0.99
ABCF3-211ENST00000475728 VGFO15240 615 aaPredicted RBP21.22■□□□□ 0.99
ABCF3-211ENST00000475728 PIP4K2BP78356 416 aa21.22■□□□□ 0.99
ABCF3-211ENST00000475728 KCNA6P17658 529 aa21.21■□□□□ 0.99
ABCF3-211ENST00000475728 DIP2AQ14689 1571 aa21.2■□□□□ 0.98
ABCF3-211ENST00000475728 NEXMIFQ5QGS0 1516 aa21.19■□□□□ 0.98
ABCF3-211ENST00000475728 PIK3R4Q99570 1358 aa21.18■□□□□ 0.98
ABCF3-211ENST00000475728 ANKRD30BQ9BXX2 1392 aa21.18■□□□□ 0.98
ABCF3-211ENST00000475728 SPATA31E1Q6ZUB1 1445 aa21.17■□□□□ 0.98
ABCF3-211ENST00000475728 ADAMTS13Q76LX8 1427 aa21.17■□□□□ 0.98
ABCF3-211ENST00000475728 SENP3Q9H4L4 574 aaPredicted RBP21.16■□□□□ 0.98
ABCF3-211ENST00000475728 SETBP1Q9Y6X0 1596 aa21.15■□□□□ 0.98
ABCF3-211ENST00000475728 RGL3Q3MIN7 710 aa21.15■□□□□ 0.98
ABCF3-211ENST00000475728 PHF23Q9BUL5 403 aaPredicted RBP21.15■□□□□ 0.98
ABCF3-211ENST00000475728 LRRC7Q96NW7 1537 aa21.14■□□□□ 0.97
ABCF3-211ENST00000475728 NKTRP30414 1462 aaKnown RBP21.13■□□□□ 0.97
ABCF3-211ENST00000475728 NWD1Q149M9 1564 aa21.12■□□□□ 0.97
ABCF3-211ENST00000475728 PROSER2Q86WR7 435 aaPredicted RBP21.11■□□□□ 0.97
ABCF3-211ENST00000475728 STRCP1A6NGW2 1772 aa21.1■□□□□ 0.97
ABCF3-211ENST00000475728 TOM1O60784 492 aa21.1■□□□□ 0.97
ABCF3-211ENST00000475728 PPLO60437 1756 aa21.08■□□□□ 0.96
ABCF3-211ENST00000475728 NRXN3Q9Y4C0 1643 aa21.07■□□□□ 0.96
ABCF3-211ENST00000475728 TMEM94Q12767 1356 aa21.07■□□□□ 0.96
ABCF3-211ENST00000475728 CHD2O14647 1828 aaKnown RBP21.06■□□□□ 0.96
ABCF3-211ENST00000475728 STAC3Q96MF2 364 aa21.05■□□□□ 0.96
ABCF3-211ENST00000475728 AMOTL2Q9Y2J4 779 aa21.05■□□□□ 0.96
ABCF3-211ENST00000475728 NCOA3Q9Y6Q9 1424 aa21.04■□□□□ 0.96
ABCF3-211ENST00000475728 ADGRF5Q8IZF2 1346 aa21.04■□□□□ 0.96
ABCF3-211ENST00000475728 METP08581 1390 aa21.03■□□□□ 0.96
ABCF3-211ENST00000475728 MYOM2P54296 1465 aa21.01■□□□□ 0.95
ABCF3-211ENST00000475728 ALKQ9UM73 1620 aa21.01■□□□□ 0.95
ABCF3-211ENST00000475728 PTPRUQ92729 1446 aa21.01■□□□□ 0.95
ABCF3-211ENST00000475728 IFT172Q9UG01 1749 aa21.01■□□□□ 0.95
ABCF3-211ENST00000475728 MSH6P52701 1360 aa21■□□□□ 0.95
ABCF3-211ENST00000475728 PIK3C2GO75747 1445 aa20.99■□□□□ 0.95
ABCF3-211ENST00000475728 C14orf37Q86TY3 774 aa20.99■□□□□ 0.95
ABCF3-211ENST00000475728 NRXN1Q9ULB1 1477 aa20.97■□□□□ 0.95
ABCF3-211ENST00000475728 XRN1Q8IZH2 1706 aaKnown RBP20.97■□□□□ 0.95
ABCF3-211ENST00000475728 DCAF11Q8TEB1 546 aa20.96■□□□□ 0.95
ABCF3-211ENST00000475728 DHX57Q6P158 1386 aaKnown RBP20.96■□□□□ 0.95
ABCF3-211ENST00000475728 RBM33Q96EV2 1170 aaKnown RBP20.95■□□□□ 0.94
ABCF3-211ENST00000475728 PRAG1Q86YV5 1406 aa20.95■□□□□ 0.94
ABCF3-211ENST00000475728 C19orf44Q9H6X5 657 aa20.94■□□□□ 0.94
ABCF3-211ENST00000475728 C14orf93Q9H972 538 aaKnown RBP20.94■□□□□ 0.94
ABCF3-211ENST00000475728 XIRP1Q702N8 1843 aaKnown RBP20.94■□□□□ 0.94
ABCF3-211ENST00000475728 PTCH1Q13635 1447 aa20.94■□□□□ 0.94
ABCF3-211ENST00000475728 SETD1AO15047 1707 aaKnown RBP20.93■□□□□ 0.94
ABCF3-211ENST00000475728 KDM2AQ9Y2K7 1162 aa20.93■□□□□ 0.94
ABCF3-211ENST00000475728 LAMC1P11047 1609 aa20.91■□□□□ 0.94
ABCF3-211ENST00000475728 ATF3P18847 181 aa20.91■□□□□ 0.94
ABCF3-211ENST00000475728 LRPPRCP42704 1394 aaKnown RBP20.91■□□□□ 0.94
ABCF3-211ENST00000475728 CADPS2Q86UW7 1296 aa20.91■□□□□ 0.94
ABCF3-211ENST00000475728 RGS17Q9UGC6 210 aaPredicted RBP20.91■□□□□ 0.94
ABCF3-211ENST00000475728 DCCP43146 1447 aa20.89■□□□□ 0.94
ABCF3-211ENST00000475728 CFAP70Q5T0N1 1121 aa20.89■□□□□ 0.93
ABCF3-211ENST00000475728 ABCC11Q96J66 1382 aa20.88■□□□□ 0.93
ABCF3-211ENST00000475728 ROBO2Q9HCK4 1378 aa20.87■□□□□ 0.93
ABCF3-211ENST00000475728 TMEM132EQ6IEE7 984 aa20.87■□□□□ 0.93
ABCF3-211ENST00000475728 SLAIN2Q9P270 581 aa20.87■□□□□ 0.93
ABCF3-211ENST00000475728 STK26Q9P289 416 aa20.87■□□□□ 0.93
ABCF3-211ENST00000475728 TECPR2O15040 1411 aa20.87■□□□□ 0.93
ABCF3-211ENST00000475728 FAM135BQ49AJ0 1406 aa20.87■□□□□ 0.93
ABCF3-211ENST00000475728 ADGRL3Q9HAR2 1447 aa20.87■□□□□ 0.93
ABCF3-211ENST00000475728 PCGF6Q9BYE7 350 aa20.86■□□□□ 0.93
ABCF3-211ENST00000475728 YTHDC2Q9H6S0 1430 aaKnown RBP20.86■□□□□ 0.93
ABCF3-211ENST00000475728 SIRT1Q96EB6 747 aa20.85■□□□□ 0.93
ABCF3-211ENST00000475728 NEUROD1Q13562 356 aa20.84■□□□□ 0.93
ABCF3-211ENST00000475728 SIN3AQ96ST3 1273 aa20.84■□□□□ 0.93
ABCF3-211ENST00000475728 ASXL1Q8IXJ9 1541 aa20.83■□□□□ 0.93
ABCF3-211ENST00000475728 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.82■□□□□ 0.92
ABCF3-211ENST00000475728 L3MBTL2Q969R5 705 aa20.8■□□□□ 0.92
ABCF3-211ENST00000475728 KNDC1Q76NI1 1749 aa20.8■□□□□ 0.92
ABCF3-211ENST00000475728 ADGRB1O14514 1584 aa20.77■□□□□ 0.92
ABCF3-211ENST00000475728 POTEAQ6S8J7 498 aa20.77■□□□□ 0.92
ABCF3-211ENST00000475728 WAPLQ7Z5K2 1190 aa20.76■□□□□ 0.91
ABCF3-211ENST00000475728 DLC1Q96QB1 1528 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms