RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 FBXO3Q9UK99 471 aa13.88□□□□□ -0.19
DDX39B-217ENST00000474961 MADDQ8WXG6 1647 aa13.88□□□□□ -0.19
DDX39B-217ENST00000474961 SIN3AQ96ST3 1273 aa13.87□□□□□ -0.19
DDX39B-217ENST00000474961 PLA2R1Q13018 1463 aa13.87□□□□□ -0.19
DDX39B-217ENST00000474961 ZMYM3Q14202 1370 aa13.86□□□□□ -0.19
DDX39B-217ENST00000474961 RIMS1Q86UR5 1692 aaKnown RBP13.86□□□□□ -0.19
DDX39B-217ENST00000474961 PREX1Q8TCU6 1659 aa13.86□□□□□ -0.19
DDX39B-217ENST00000474961 C3P01024 1663 aa13.85□□□□□ -0.19
DDX39B-217ENST00000474961 PTPRTO14522 1441 aa13.85□□□□□ -0.19
DDX39B-217ENST00000474961 NEUROD1Q13562 356 aa13.84□□□□□ -0.19
DDX39B-217ENST00000474961 TRPM2O94759 1503 aa13.84□□□□□ -0.19
DDX39B-217ENST00000474961 NOS1P29475 1434 aa13.83□□□□□ -0.2
DDX39B-217ENST00000474961 FBXO31Q5XUX0 539 aaPredicted RBP13.83□□□□□ -0.2
DDX39B-217ENST00000474961 ERVK-7P63135 1459 aa13.82□□□□□ -0.2
DDX39B-217ENST00000474961 SYNMO15061 1565 aa13.82□□□□□ -0.2
DDX39B-217ENST00000474961 CLTCL1P53675 1640 aa13.82□□□□□ -0.2
DDX39B-217ENST00000474961 CCDC144AA2RUR9 1427 aa13.81□□□□□ -0.2
DDX39B-217ENST00000474961 KIF1BO60333 1816 aa13.8□□□□□ -0.2
DDX39B-217ENST00000474961 SPATA31D1Q6ZQQ2 1576 aa13.8□□□□□ -0.2
DDX39B-217ENST00000474961 KDM4FA0A1W2PPD8 638 aa13.8□□□□□ -0.2
DDX39B-217ENST00000474961 CEBPAP49715 358 aaPredicted RBP13.8□□□□□ -0.2
DDX39B-217ENST00000474961 UGGT1Q9NYU2 1555 aa13.79□□□□□ -0.2
DDX39B-217ENST00000474961 PIK3C2BO00750 1634 aa13.79□□□□□ -0.2
DDX39B-217ENST00000474961 FXR2P51116 673 aaKnown RBP eCLIP13.77□□□□□ -0.21
DDX39B-217ENST00000474961 TNRQ92752 1358 aa13.76□□□□□ -0.21
DDX39B-217ENST00000474961 ZEB1P37275 1124 aaPredicted RBP13.76□□□□□ -0.21
DDX39B-217ENST00000474961 SLC52A1Q9NWF4 448 aa13.76□□□□□ -0.21
DDX39B-217ENST00000474961 MYO5BQ9ULV0 1848 aa13.76□□□□□ -0.21
DDX39B-217ENST00000474961 PTPRMP28827 1452 aa13.75□□□□□ -0.21
DDX39B-217ENST00000474961 SETD1BQ9UPS6 1966 aaKnown RBP13.75□□□□□ -0.21
DDX39B-217ENST00000474961 IDI1Q13907 227 aa13.75□□□□□ -0.21
DDX39B-217ENST00000474961 TONSLQ96HA7 1378 aa13.74□□□□□ -0.21
DDX39B-217ENST00000474961 PLEKHG5O94827 1062 aa13.74□□□□□ -0.21
DDX39B-217ENST00000474961 PIP4P2Q8N4L2 257 aa13.74□□□□□ -0.21
DDX39B-217ENST00000474961 TIMELESSQ9UNS1 1208 aa13.73□□□□□ -0.21
DDX39B-217ENST00000474961 SPATA31E1Q6ZUB1 1445 aa13.73□□□□□ -0.21
DDX39B-217ENST00000474961 NEURL4Q96JN8 1562 aa13.72□□□□□ -0.21
DDX39B-217ENST00000474961 CHGAP10645 457 aaKnown RBP13.72□□□□□ -0.21
DDX39B-217ENST00000474961 RGL3Q3MIN7 710 aa13.72□□□□□ -0.21
DDX39B-217ENST00000474961 L3MBTL2Q969R5 705 aa13.72□□□□□ -0.21
DDX39B-217ENST00000474961 TMEM131LA2VDJ0 1609 aa13.72□□□□□ -0.21
DDX39B-217ENST00000474961 ADGRB3O60242 1522 aa13.71□□□□□ -0.21
DDX39B-217ENST00000474961 PRKAR2AP13861 404 aaKnown RBP13.7□□□□□ -0.22
DDX39B-217ENST00000474961 MYO3AQ8NEV4 1616 aa13.7□□□□□ -0.22
DDX39B-217ENST00000474961 NLRP1Q9C000 1473 aa13.69□□□□□ -0.22
DDX39B-217ENST00000474961 MIER1Q8N108 512 aa13.69□□□□□ -0.22
DDX39B-217ENST00000474961 KDM5AP29375 1690 aaKnown RBP13.69□□□□□ -0.22
DDX39B-217ENST00000474961 UBR1Q8IWV7 1749 aa13.68□□□□□ -0.22
DDX39B-217ENST00000474961 IFT172Q9UG01 1749 aa13.68□□□□□ -0.22
DDX39B-217ENST00000474961 PPP1R15AO75807 674 aaPredicted RBP13.67□□□□□ -0.22
DDX39B-217ENST00000474961 ZNF326Q5BKZ1 582 aaKnown RBP13.67□□□□□ -0.22
DDX39B-217ENST00000474961 PPLO60437 1756 aa13.67□□□□□ -0.22
DDX39B-217ENST00000474961 A2ML1A8K2U0 1454 aa13.67□□□□□ -0.22
DDX39B-217ENST00000474961 PLCD3Q8N3E9 789 aa13.66□□□□□ -0.22
DDX39B-217ENST00000474961 DCAF11Q8TEB1 546 aa13.66□□□□□ -0.22
DDX39B-217ENST00000474961 KDM2AQ9Y2K7 1162 aa13.66□□□□□ -0.22
DDX39B-217ENST00000474961 ZNF142P52746 1687 aaPredicted RBP13.65□□□□□ -0.22
DDX39B-217ENST00000474961 RPGRIP1LQ68CZ1 1315 aa13.64□□□□□ -0.23
DDX39B-217ENST00000474961 CEP170BQ9Y4F5 1589 aaPredicted RBP13.64□□□□□ -0.23
DDX39B-217ENST00000474961 POTEHQ6S545 545 aa13.64□□□□□ -0.23
DDX39B-217ENST00000474961 NEXMIFQ5QGS0 1516 aa13.64□□□□□ -0.23
DDX39B-217ENST00000474961 UHRF1BP1Q6BDS2 1440 aa13.62□□□□□ -0.23
DDX39B-217ENST00000474961 NBPF8Q3BBV2 869 aa13.61□□□□□ -0.23
DDX39B-217ENST00000474961 CHADLQ6NUI6 762 aa13.61□□□□□ -0.23
DDX39B-217ENST00000474961 STAC3Q96MF2 364 aa13.61□□□□□ -0.23
DDX39B-217ENST00000474961 RIMS2Q9UQ26 1411 aa13.61□□□□□ -0.23
DDX39B-217ENST00000474961 MYOM2P54296 1465 aa13.61□□□□□ -0.23
DDX39B-217ENST00000474961 THEMISQ8N1K5 641 aaPredicted RBP13.6□□□□□ -0.23
DDX39B-217ENST00000474961 CREBZFQ9NS37 354 aa13.6□□□□□ -0.23
DDX39B-217ENST00000474961 PRAG1Q86YV5 1406 aa13.59□□□□□ -0.23
DDX39B-217ENST00000474961 NUTM2DQ5VT03 806 aaPredicted RBP13.59□□□□□ -0.23
DDX39B-217ENST00000474961 ADGRF5Q8IZF2 1346 aa13.59□□□□□ -0.23
DDX39B-217ENST00000474961 TMEM2Q9UHN6 1383 aa13.58□□□□□ -0.23
DDX39B-217ENST00000474961 ZFYVE9O95405 1425 aa13.58□□□□□ -0.24
DDX39B-217ENST00000474961 VGFO15240 615 aaPredicted RBP13.58□□□□□ -0.24
DDX39B-217ENST00000474961 VASPP50552 380 aaPredicted RBP13.58□□□□□ -0.24
DDX39B-217ENST00000474961 ARHGAP23Q9P227 1491 aa13.58□□□□□ -0.24
DDX39B-217ENST00000474961 SLIT1O75093 1534 aa13.58□□□□□ -0.24
DDX39B-217ENST00000474961 NRXN1Q9ULB1 1477 aa13.57□□□□□ -0.24
DDX39B-217ENST00000474961 HDGFP51858 240 aaKnown RBP13.57□□□□□ -0.24
DDX39B-217ENST00000474961 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.57□□□□□ -0.24
DDX39B-217ENST00000474961 ZBTB47Q9UFB7 747 aaPredicted RBP13.57□□□□□ -0.24
DDX39B-217ENST00000474961 TRPM1Q7Z4N2 1603 aa13.57□□□□□ -0.24
DDX39B-217ENST00000474961 KIAA1210Q9ULL0 1709 aa13.56□□□□□ -0.24
DDX39B-217ENST00000474961 LTKP29376 864 aa13.54□□□□□ -0.24
DDX39B-217ENST00000474961 TXNDC2Q86VQ3 553 aa13.54□□□□□ -0.24
DDX39B-217ENST00000474961 EID1Q9Y6B2 187 aa13.54□□□□□ -0.24
DDX39B-217ENST00000474961 PIK3C2GO75747 1445 aa13.54□□□□□ -0.24
DDX39B-217ENST00000474961 FARP1Q9Y4F1 1045 aaPredicted RBP13.53□□□□□ -0.24
DDX39B-217ENST00000474961 RALGAPBQ86X10 1494 aa13.53□□□□□ -0.24
DDX39B-217ENST00000474961 SCAF11Q99590 1463 aaKnown RBP13.52□□□□□ -0.25
DDX39B-217ENST00000474961 POLR1AO95602 1720 aaPredicted RBP13.52□□□□□ -0.25
DDX39B-217ENST00000474961 IQGAP1P46940 1657 aa13.51□□□□□ -0.25
DDX39B-217ENST00000474961 LAMC1P11047 1609 aa13.51□□□□□ -0.25
DDX39B-217ENST00000474961 NRXN3Q9Y4C0 1643 aa13.51□□□□□ -0.25
DDX39B-217ENST00000474961 LMTK3Q96Q04 1460 aa13.51□□□□□ -0.25
DDX39B-217ENST00000474961 NBPF1Q3BBV0 1214 aa13.51□□□□□ -0.25
DDX39B-217ENST00000474961 CFAP70Q5T0N1 1121 aa13.51□□□□□ -0.25
DDX39B-217ENST00000474961 ANKLE2Q86XL3 938 aa13.51□□□□□ -0.25
DDX39B-217ENST00000474961 C14orf93Q9H972 538 aaKnown RBP13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms