RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.79□□□□□ -0.68
LSAMP-203ENST00000474851 SLC4A1APQ9BWU0 796 aaKnown RBP10.79□□□□□ -0.68
LSAMP-203ENST00000474851 RIMS2Q9UQ26 1411 aa10.78□□□□□ -0.68
LSAMP-203ENST00000474851 NUTM2DQ5VT03 806 aaPredicted RBP10.78□□□□□ -0.68
LSAMP-203ENST00000474851 TBX22Q9Y458 520 aa10.78□□□□□ -0.68
LSAMP-203ENST00000474851 PIK3C2BO00750 1634 aa10.77□□□□□ -0.68
LSAMP-203ENST00000474851 C1QBPQ07021 282 aaKnown RBP10.77□□□□□ -0.69
LSAMP-203ENST00000474851 UBR1Q8IWV7 1749 aa10.77□□□□□ -0.69
LSAMP-203ENST00000474851 CPS1P31327 1500 aa10.77□□□□□ -0.69
LSAMP-203ENST00000474851 PLEKHG1Q9ULL1 1385 aa10.77□□□□□ -0.69
LSAMP-203ENST00000474851 TET3O43151 1660 aa10.76□□□□□ -0.69
LSAMP-203ENST00000474851 ADGRB3O60242 1522 aa10.76□□□□□ -0.69
LSAMP-203ENST00000474851 LRRC7Q96NW7 1537 aa10.76□□□□□ -0.69
LSAMP-203ENST00000474851 TOM1O60784 492 aa10.76□□□□□ -0.69
LSAMP-203ENST00000474851 NPM3O75607 178 aaKnown RBP10.76□□□□□ -0.69
LSAMP-203ENST00000474851 PPP1R15AO75807 674 aaPredicted RBP10.76□□□□□ -0.69
LSAMP-203ENST00000474851 CNKSR2Q8WXI2 1034 aa10.76□□□□□ -0.69
LSAMP-203ENST00000474851 BCANQ96GW7 911 aa10.76□□□□□ -0.69
LSAMP-203ENST00000474851 MPHOSPH9Q99550 1183 aa10.76□□□□□ -0.69
LSAMP-203ENST00000474851 IQGAP3Q86VI3 1631 aa10.76□□□□□ -0.69
LSAMP-203ENST00000474851 RBM33Q96EV2 1170 aaKnown RBP10.74□□□□□ -0.69
LSAMP-203ENST00000474851 PIP4K2BP78356 416 aa10.73□□□□□ -0.69
LSAMP-203ENST00000474851 PROSER2Q86WR7 435 aaPredicted RBP10.73□□□□□ -0.69
LSAMP-203ENST00000474851 ADAMTS13Q76LX8 1427 aa10.73□□□□□ -0.69
LSAMP-203ENST00000474851 ZNF326Q5BKZ1 582 aaKnown RBP10.72□□□□□ -0.69
LSAMP-203ENST00000474851 TMEM94Q12767 1356 aa10.72□□□□□ -0.69
LSAMP-203ENST00000474851 SETD5Q9C0A6 1442 aa10.72□□□□□ -0.69
LSAMP-203ENST00000474851 TMEM131LA2VDJ0 1609 aa10.72□□□□□ -0.69
LSAMP-203ENST00000474851 E9PCH4 1651 aa10.72□□□□□ -0.69
LSAMP-203ENST00000474851 KDM5AP29375 1690 aaKnown RBP10.71□□□□□ -0.69
LSAMP-203ENST00000474851 HSPA1LP34931 641 aa10.71□□□□□ -0.69
LSAMP-203ENST00000474851 IQGAP1P46940 1657 aa10.71□□□□□ -0.69
LSAMP-203ENST00000474851 CFAP65Q6ZU64 1925 aaKnown RBP10.7□□□□□ -0.7
LSAMP-203ENST00000474851 RPGRIP1LQ68CZ1 1315 aa10.69□□□□□ -0.7
LSAMP-203ENST00000474851 ACIN1Q9UKV3 1341 aaKnown RBP10.69□□□□□ -0.7
LSAMP-203ENST00000474851 HRCP23327 699 aa10.69□□□□□ -0.7
LSAMP-203ENST00000474851 RNF216Q9NWF9 866 aaPredicted RBP10.69□□□□□ -0.7
LSAMP-203ENST00000474851 AMOTL2Q9Y2J4 779 aa10.69□□□□□ -0.7
LSAMP-203ENST00000474851 POLR1AO95602 1720 aaPredicted RBP10.69□□□□□ -0.7
LSAMP-203ENST00000474851 ALKQ9UM73 1620 aa10.69□□□□□ -0.7
LSAMP-203ENST00000474851 PIK3R4Q99570 1358 aa10.68□□□□□ -0.7
LSAMP-203ENST00000474851 RAB3GAP2Q9H2M9 1393 aa10.68□□□□□ -0.7
LSAMP-203ENST00000474851 VGFO15240 615 aaPredicted RBP10.68□□□□□ -0.7
LSAMP-203ENST00000474851 GCC2Q8IWJ2 1684 aa10.68□□□□□ -0.7
LSAMP-203ENST00000474851 PTPRUQ92729 1446 aa10.67□□□□□ -0.7
LSAMP-203ENST00000474851 METP08581 1390 aa10.67□□□□□ -0.7
LSAMP-203ENST00000474851 TRPM2O94759 1503 aa10.67□□□□□ -0.7
LSAMP-203ENST00000474851 RGL3Q3MIN7 710 aa10.66□□□□□ -0.7
LSAMP-203ENST00000474851 C19orf44Q9H6X5 657 aa10.65□□□□□ -0.7
LSAMP-203ENST00000474851 SLAIN2Q9P270 581 aa10.65□□□□□ -0.7
LSAMP-203ENST00000474851 FAM135BQ49AJ0 1406 aa10.65□□□□□ -0.7
LSAMP-203ENST00000474851 NCOA3Q9Y6Q9 1424 aa10.65□□□□□ -0.7
LSAMP-203ENST00000474851 STRCP1A6NGW2 1772 aa10.65□□□□□ -0.71
LSAMP-203ENST00000474851 NKTRP30414 1462 aaKnown RBP10.64□□□□□ -0.71
LSAMP-203ENST00000474851 SPATA31E1Q6ZUB1 1445 aa10.64□□□□□ -0.71
LSAMP-203ENST00000474851 ADGRF5Q8IZF2 1346 aa10.63□□□□□ -0.71
LSAMP-203ENST00000474851 CCDC144AA2RUR9 1427 aa10.63□□□□□ -0.71
LSAMP-203ENST00000474851 MSH6P52701 1360 aa10.63□□□□□ -0.71
LSAMP-203ENST00000474851 CLTCL1P53675 1640 aa10.62□□□□□ -0.71
LSAMP-203ENST00000474851 ANKRD30BQ9BXX2 1392 aa10.62□□□□□ -0.71
LSAMP-203ENST00000474851 NWD1Q149M9 1564 aa10.61□□□□□ -0.71
LSAMP-203ENST00000474851 NEXMIFQ5QGS0 1516 aa10.61□□□□□ -0.71
LSAMP-203ENST00000474851 SETBP1Q9Y6X0 1596 aa10.6□□□□□ -0.71
LSAMP-203ENST00000474851 C14orf37Q86TY3 774 aa10.6□□□□□ -0.71
LSAMP-203ENST00000474851 CADPS2Q86UW7 1296 aa10.6□□□□□ -0.71
LSAMP-203ENST00000474851 DISP3Q9P2K9 1392 aa10.6□□□□□ -0.71
LSAMP-203ENST00000474851 ATF3P18847 181 aa10.59□□□□□ -0.71
LSAMP-203ENST00000474851 ILDR2Q71H61 639 aa10.59□□□□□ -0.71
LSAMP-203ENST00000474851 PELP1Q8IZL8 1130 aaKnown RBP10.59□□□□□ -0.71
LSAMP-203ENST00000474851 DIP2AQ14689 1571 aa10.58□□□□□ -0.72
LSAMP-203ENST00000474851 ROBO2Q9HCK4 1378 aa10.58□□□□□ -0.72
LSAMP-203ENST00000474851 C14orf93Q9H972 538 aaKnown RBP10.58□□□□□ -0.72
LSAMP-203ENST00000474851 SPHKAPQ2M3C7 1700 aa10.58□□□□□ -0.72
LSAMP-203ENST00000474851 TMEM132EQ6IEE7 984 aa10.57□□□□□ -0.72
LSAMP-203ENST00000474851 NRXN3Q9Y4C0 1643 aa10.57□□□□□ -0.72
LSAMP-203ENST00000474851 BRINP3Q76B58 766 aa10.56□□□□□ -0.72
LSAMP-203ENST00000474851 CFAP70Q5T0N1 1121 aa10.55□□□□□ -0.72
LSAMP-203ENST00000474851 ABCC11Q96J66 1382 aa10.54□□□□□ -0.72
LSAMP-203ENST00000474851 WAPLQ7Z5K2 1190 aa10.54□□□□□ -0.72
LSAMP-203ENST00000474851 PRAG1Q86YV5 1406 aa10.54□□□□□ -0.72
LSAMP-203ENST00000474851 SIRT1Q96EB6 747 aa10.54□□□□□ -0.72
LSAMP-203ENST00000474851 STK26Q9P289 416 aa10.54□□□□□ -0.72
LSAMP-203ENST00000474851 MYO5BQ9ULV0 1848 aa10.54□□□□□ -0.72
LSAMP-203ENST00000474851 LRPPRCP42704 1394 aaKnown RBP10.53□□□□□ -0.72
LSAMP-203ENST00000474851 PIK3C2GO75747 1445 aa10.53□□□□□ -0.72
LSAMP-203ENST00000474851 PTCH1Q13635 1447 aa10.53□□□□□ -0.72
LSAMP-203ENST00000474851 DCCP43146 1447 aa10.52□□□□□ -0.73
LSAMP-203ENST00000474851 ADGRL3Q9HAR2 1447 aa10.52□□□□□ -0.73
LSAMP-203ENST00000474851 CHD2O14647 1828 aaKnown RBP10.52□□□□□ -0.73
LSAMP-203ENST00000474851 DCAF11Q8TEB1 546 aa10.52□□□□□ -0.73
LSAMP-203ENST00000474851 STAC3Q96MF2 364 aa10.52□□□□□ -0.73
LSAMP-203ENST00000474851 RGS17Q9UGC6 210 aaPredicted RBP10.52□□□□□ -0.73
LSAMP-203ENST00000474851 KDM2AQ9Y2K7 1162 aa10.52□□□□□ -0.73
LSAMP-203ENST00000474851 NRXN1Q9ULB1 1477 aa10.52□□□□□ -0.73
LSAMP-203ENST00000474851 DHX57Q6P158 1386 aaKnown RBP10.52□□□□□ -0.73
LSAMP-203ENST00000474851 MST1RQ04912 1400 aa10.51□□□□□ -0.73
LSAMP-203ENST00000474851 XIRP1Q702N8 1843 aaKnown RBP10.51□□□□□ -0.73
LSAMP-203ENST00000474851 PLEKHH1Q9ULM0 1364 aa10.51□□□□□ -0.73
LSAMP-203ENST00000474851 TECPR2O15040 1411 aa10.5□□□□□ -0.73
LSAMP-203ENST00000474851 DDX17Q92841 729 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms