RNA–Protein interactions for RNA: ENST00000474823.5

COPS6-208, Transcript of COP9 signalosome subunit 6, humanhuman

TSL 2

Gene COPS6, Length 752 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6-208ENST00000474823 RIMS2Q9UQ26 1411 aa15.4■□□□□ 0.06
COPS6-208ENST00000474823 ANKRD30BQ9BXX2 1392 aa15.39■□□□□ 0.05
COPS6-208ENST00000474823 MYO5BQ9ULV0 1848 aa15.39■□□□□ 0.05
COPS6-208ENST00000474823 BCANQ96GW7 911 aa15.39■□□□□ 0.05
COPS6-208ENST00000474823 MED14O60244 1454 aa15.38■□□□□ 0.05
COPS6-208ENST00000474823 NEURL4Q96JN8 1562 aa15.37■□□□□ 0.05
COPS6-208ENST00000474823 ZFYVE9O95405 1425 aa15.36■□□□□ 0.05
COPS6-208ENST00000474823 RGL3Q3MIN7 710 aa15.36■□□□□ 0.05
COPS6-208ENST00000474823 NUTM2DQ5VT03 806 aaPredicted RBP15.36■□□□□ 0.05
COPS6-208ENST00000474823 RPGRIP1LQ68CZ1 1315 aa15.36■□□□□ 0.05
COPS6-208ENST00000474823 IQGAP1P46940 1657 aa15.35■□□□□ 0.05
COPS6-208ENST00000474823 DHX57Q6P158 1386 aaKnown RBP15.34■□□□□ 0.05
COPS6-208ENST00000474823 PLEKHG1Q9ULL1 1385 aa15.34■□□□□ 0.05
COPS6-208ENST00000474823 VGFO15240 615 aaPredicted RBP15.33■□□□□ 0.04
COPS6-208ENST00000474823 SENP3Q9H4L4 574 aaPredicted RBP15.32■□□□□ 0.04
COPS6-208ENST00000474823 SPATA31E1Q6ZUB1 1445 aa15.32■□□□□ 0.04
COPS6-208ENST00000474823 NEXMIFQ5QGS0 1516 aa15.31■□□□□ 0.04
COPS6-208ENST00000474823 SLC26A8Q96RN1 970 aa15.3■□□□□ 0.04
COPS6-208ENST00000474823 ZNF335Q9H4Z2 1342 aaPredicted RBP15.28■□□□□ 0.04
COPS6-208ENST00000474823 TBX22Q9Y458 520 aa15.27■□□□□ 0.04
COPS6-208ENST00000474823 PPLO60437 1756 aa15.26■□□□□ 0.03
COPS6-208ENST00000474823 NEUROD1Q13562 356 aa15.25■□□□□ 0.03
COPS6-208ENST00000474823 DCAF11Q8TEB1 546 aa15.24■□□□□ 0.03
COPS6-208ENST00000474823 STAC3Q96MF2 364 aa15.24■□□□□ 0.03
COPS6-208ENST00000474823 SIN3AQ96ST3 1273 aa15.24■□□□□ 0.03
COPS6-208ENST00000474823 ADAMTS13Q76LX8 1427 aa15.24■□□□□ 0.03
COPS6-208ENST00000474823 DIP2AQ14689 1571 aa15.24■□□□□ 0.03
COPS6-208ENST00000474823 SETBP1Q9Y6X0 1596 aa15.24■□□□□ 0.03
COPS6-208ENST00000474823 ADGRF5Q8IZF2 1346 aa15.23■□□□□ 0.03
COPS6-208ENST00000474823 KDM2AQ9Y2K7 1162 aa15.23■□□□□ 0.03
COPS6-208ENST00000474823 KCNA6P17658 529 aa15.22■□□□□ 0.03
COPS6-208ENST00000474823 PIK3R4Q99570 1358 aa15.22■□□□□ 0.03
COPS6-208ENST00000474823 LTBP4Q8N2S1 1624 aa15.21■□□□□ 0.03
COPS6-208ENST00000474823 IFT172Q9UG01 1749 aa15.21■□□□□ 0.03
COPS6-208ENST00000474823 CERKQ8TCT0 537 aa15.21■□□□□ 0.03
COPS6-208ENST00000474823 CPS1P31327 1500 aa15.21■□□□□ 0.03
COPS6-208ENST00000474823 MYOM2P54296 1465 aa15.2■□□□□ 0.02
COPS6-208ENST00000474823 NRXN3Q9Y4C0 1643 aa15.19■□□□□ 0.02
COPS6-208ENST00000474823 CCER1Q8TC90 406 aaPredicted RBP15.19■□□□□ 0.02
COPS6-208ENST00000474823 PIK3C2GO75747 1445 aa15.17■□□□□ 0.02
COPS6-208ENST00000474823 ALKQ9UM73 1620 aa15.17■□□□□ 0.02
COPS6-208ENST00000474823 METP08581 1390 aa15.17■□□□□ 0.02
COPS6-208ENST00000474823 AMOTL2Q9Y2J4 779 aa15.17■□□□□ 0.02
COPS6-208ENST00000474823 CLSPNQ9HAW4 1339 aa15.17■□□□□ 0.02
COPS6-208ENST00000474823 NRXN1Q9ULB1 1477 aa15.16■□□□□ 0.02
COPS6-208ENST00000474823 TONSLQ96HA7 1378 aa15.16■□□□□ 0.02
COPS6-208ENST00000474823 PROSER2Q86WR7 435 aaPredicted RBP15.16■□□□□ 0.02
COPS6-208ENST00000474823 L3MBTL2Q969R5 705 aa15.16■□□□□ 0.02
COPS6-208ENST00000474823 NKTRP30414 1462 aaKnown RBP15.15■□□□□ 0.02
COPS6-208ENST00000474823 C14orf93Q9H972 538 aaKnown RBP15.15■□□□□ 0.02
COPS6-208ENST00000474823 STRCP1A6NGW2 1772 aa15.15■□□□□ 0.02
COPS6-208ENST00000474823 CHD2O14647 1828 aaKnown RBP15.15■□□□□ 0.02
COPS6-208ENST00000474823 NWD1Q149M9 1564 aa15.15■□□□□ 0.02
COPS6-208ENST00000474823 CFAP70Q5T0N1 1121 aa15.14■□□□□ 0.01
COPS6-208ENST00000474823 IQSEC2Q5JU85 1478 aa15.14■□□□□ 0.01
COPS6-208ENST00000474823 LRRC7Q96NW7 1537 aa15.13■□□□□ 0.01
COPS6-208ENST00000474823 PTPRUQ92729 1446 aa15.13■□□□□ 0.01
COPS6-208ENST00000474823 TMEM94Q12767 1356 aa15.11■□□□□ 0.01
COPS6-208ENST00000474823 LAMC1P11047 1609 aa15.11■□□□□ 0.01
COPS6-208ENST00000474823 TMEM132EQ6IEE7 984 aa15.11■□□□□ 0.01
COPS6-208ENST00000474823 C14orf37Q86TY3 774 aa15.11■□□□□ 0.01
COPS6-208ENST00000474823 SETD1AO15047 1707 aaKnown RBP15.11■□□□□ 0.01
COPS6-208ENST00000474823 RBM33Q96EV2 1170 aaKnown RBP15.1■□□□□ 0.01
COPS6-208ENST00000474823 STK26Q9P289 416 aa15.1■□□□□ 0.01
COPS6-208ENST00000474823 LRPPRCP42704 1394 aaKnown RBP15.09■□□□□ 0.01
COPS6-208ENST00000474823 XRN1Q8IZH2 1706 aaKnown RBP15.09■□□□□ 0.01
COPS6-208ENST00000474823 PRAG1Q86YV5 1406 aa15.09■□□□□ 0.01
COPS6-208ENST00000474823 YTHDC2Q9H6S0 1430 aaKnown RBP15.08■□□□□ 0
COPS6-208ENST00000474823 NCOA3Q9Y6Q9 1424 aa15.08■□□□□ 0
COPS6-208ENST00000474823 UBAP1LF5GYI3 381 aa15.07■□□□□ 0
COPS6-208ENST00000474823 TOM1O60784 492 aa15.07■□□□□ 0
COPS6-208ENST00000474823 MSH6P52701 1360 aa15.07■□□□□ 0
COPS6-208ENST00000474823 ABCC11Q96J66 1382 aa15.07■□□□□ 0
COPS6-208ENST00000474823 PTCH1Q13635 1447 aa15.07■□□□□ 0
COPS6-208ENST00000474823 FBXO41Q8TF61 875 aa15.06■□□□□ 0
COPS6-208ENST00000474823 TIMELESSQ9UNS1 1208 aa15.06■□□□□ 0
COPS6-208ENST00000474823 ASXL1Q8IXJ9 1541 aa15.06■□□□□ 0
COPS6-208ENST00000474823 ROBO2Q9HCK4 1378 aa15.05■□□□□ -0
COPS6-208ENST00000474823 TECPR2O15040 1411 aa15.04■□□□□ -0
COPS6-208ENST00000474823 C19orf44Q9H6X5 657 aa15.04■□□□□ -0
COPS6-208ENST00000474823 KIAA1210Q9ULL0 1709 aa15.03■□□□□ -0
COPS6-208ENST00000474823 SIRT1Q96EB6 747 aa15.03■□□□□ -0
COPS6-208ENST00000474823 TRAK1Q9UPV9 953 aa15.03■□□□□ -0
COPS6-208ENST00000474823 XIRP1Q702N8 1843 aaKnown RBP15.03■□□□□ -0
COPS6-208ENST00000474823 ADGRB1O14514 1584 aa15.02■□□□□ -0
COPS6-208ENST00000474823 ATF3P18847 181 aa15.02■□□□□ -0
COPS6-208ENST00000474823 NBPF1Q3BBV0 1214 aa15.02■□□□□ -0
COPS6-208ENST00000474823 POGKQ9P215 609 aa15.02■□□□□ -0
COPS6-208ENST00000474823 ROCK2O75116 1388 aaKnown RBP15.01□□□□□ -0.01
COPS6-208ENST00000474823 KNDC1Q76NI1 1749 aa15.01□□□□□ -0.01
COPS6-208ENST00000474823 SCAF1Q9H7N4 1312 aaKnown RBP15.01□□□□□ -0.01
COPS6-208ENST00000474823 NBPF8Q3BBV2 869 aa15.01□□□□□ -0.01
COPS6-208ENST00000474823 WAPLQ7Z5K2 1190 aa15.01□□□□□ -0.01
COPS6-208ENST00000474823 CADPS2Q86UW7 1296 aa15.01□□□□□ -0.01
COPS6-208ENST00000474823 FAM135BQ49AJ0 1406 aa15□□□□□ -0.01
COPS6-208ENST00000474823 PIP4K2BP78356 416 aa15□□□□□ -0.01
COPS6-208ENST00000474823 PRAM1Q96QH2 718 aa15□□□□□ -0.01
COPS6-208ENST00000474823 ADGRL3Q9HAR2 1447 aa15□□□□□ -0.01
COPS6-208ENST00000474823 DLC1Q96QB1 1528 aa14.99□□□□□ -0.01
COPS6-208ENST00000474823 SAFB2Q14151 953 aaKnown RBP eCLIP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms