RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 UGGT1Q9NYU2 1555 aa15.29■□□□□ 0.04
SP140-208ENST00000473711 NOS1P29475 1434 aa15.29■□□□□ 0.04
SP140-208ENST00000473711 CNTLNQ9NXG0 1405 aa15.29■□□□□ 0.04
SP140-208ENST00000473711 CLTCQ00610 1675 aaKnown RBP15.28■□□□□ 0.04
SP140-208ENST00000473711 SPATA31E1Q6ZUB1 1445 aa15.28■□□□□ 0.04
SP140-208ENST00000473711 ZMYM3Q14202 1370 aa15.28■□□□□ 0.04
SP140-208ENST00000473711 IDI1Q13907 227 aa15.26■□□□□ 0.03
SP140-208ENST00000473711 SLC52A1Q9NWF4 448 aa15.25■□□□□ 0.03
SP140-208ENST00000473711 ERVK-7P63135 1459 aa15.23■□□□□ 0.03
SP140-208ENST00000473711 UHRF1BP1Q6BDS2 1440 aa15.23■□□□□ 0.03
SP140-208ENST00000473711 SYNMO15061 1565 aa15.23■□□□□ 0.03
SP140-208ENST00000473711 CEBPAP49715 358 aaPredicted RBP15.22■□□□□ 0.03
SP140-208ENST00000473711 HIRIP3Q9BW71 556 aaPredicted RBP15.22■□□□□ 0.03
SP140-208ENST00000473711 PREX1Q8TCU6 1659 aa15.22■□□□□ 0.03
SP140-208ENST00000473711 FBXO41Q8TF61 875 aa15.21■□□□□ 0.03
SP140-208ENST00000473711 STAC3Q96MF2 364 aa15.2■□□□□ 0.02
SP140-208ENST00000473711 KIF1BO60333 1816 aa15.2■□□□□ 0.02
SP140-208ENST00000473711 PRAG1Q86YV5 1406 aa15.19■□□□□ 0.02
SP140-208ENST00000473711 POTEHQ6S545 545 aa15.19■□□□□ 0.02
SP140-208ENST00000473711 STAG3Q9UJ98 1225 aa15.19■□□□□ 0.02
SP140-208ENST00000473711 HSPA5P11021 654 aaKnown RBP15.18■□□□□ 0.02
SP140-208ENST00000473711 EIF4G2P78344 907 aaKnown RBP eCLIP15.18■□□□□ 0.02
SP140-208ENST00000473711 NEURL4Q96JN8 1562 aa15.18■□□□□ 0.02
SP140-208ENST00000473711 RPGRIP1LQ68CZ1 1315 aa15.17■□□□□ 0.02
SP140-208ENST00000473711 ADGRB3O60242 1522 aa15.17■□□□□ 0.02
SP140-208ENST00000473711 PIK3C2BO00750 1634 aa15.17■□□□□ 0.02
SP140-208ENST00000473711 SPATA31D1Q6ZQQ2 1576 aa15.17■□□□□ 0.02
SP140-208ENST00000473711 MROH2AA6NES4 1674 aa15.16■□□□□ 0.02
SP140-208ENST00000473711 TNRQ92752 1358 aa15.16■□□□□ 0.02
SP140-208ENST00000473711 NBPF1Q3BBV0 1214 aa15.16■□□□□ 0.02
SP140-208ENST00000473711 NUTM2DQ5VT03 806 aaPredicted RBP15.16■□□□□ 0.02
SP140-208ENST00000473711 CARD11Q9BXL7 1154 aa15.16■□□□□ 0.02
SP140-208ENST00000473711 ADGRF5Q8IZF2 1346 aa15.16■□□□□ 0.02
SP140-208ENST00000473711 AKT1S1Q96B36 256 aa15.15■□□□□ 0.02
SP140-208ENST00000473711 RALGAPBQ86X10 1494 aa15.14■□□□□ 0.01
SP140-208ENST00000473711 LMTK3Q96Q04 1460 aa15.14■□□□□ 0.01
SP140-208ENST00000473711 ROCK2O75116 1388 aaKnown RBP15.14■□□□□ 0.01
SP140-208ENST00000473711 FER1L4A9Z1Z3 1794 aa15.13■□□□□ 0.01
SP140-208ENST00000473711 VGFO15240 615 aaPredicted RBP15.12■□□□□ 0.01
SP140-208ENST00000473711 TMEM131LA2VDJ0 1609 aa15.11■□□□□ 0.01
SP140-208ENST00000473711 CFAP70Q5T0N1 1121 aa15.11■□□□□ 0.01
SP140-208ENST00000473711 MYOM2P54296 1465 aa15.11■□□□□ 0.01
SP140-208ENST00000473711 DIEXFQ68CQ4 756 aaKnown RBP15.1■□□□□ 0.01
SP140-208ENST00000473711 TRPM1Q7Z4N2 1603 aa15.1■□□□□ 0.01
SP140-208ENST00000473711 MADDQ8WXG6 1647 aa15.1■□□□□ 0.01
SP140-208ENST00000473711 USP47Q96K76 1375 aa15.1■□□□□ 0.01
SP140-208ENST00000473711 C3P01024 1663 aa15.09■□□□□ 0.01
SP140-208ENST00000473711 A2ML1A8K2U0 1454 aa15.08■□□□□ 0.01
SP140-208ENST00000473711 ADAMTSL3P82987 1691 aa15.08■□□□□ 0
SP140-208ENST00000473711 RIMS1Q86UR5 1692 aaKnown RBP15.08■□□□□ 0
SP140-208ENST00000473711 IFT172Q9UG01 1749 aa15.08■□□□□ 0
SP140-208ENST00000473711 GPRASP1Q5JY77 1395 aa15.08■□□□□ 0
SP140-208ENST00000473711 NEXMIFQ5QGS0 1516 aa15.07■□□□□ 0
SP140-208ENST00000473711 PPLO60437 1756 aa15.07■□□□□ 0
SP140-208ENST00000473711 C14orf93Q9H972 538 aaKnown RBP15.07■□□□□ 0
SP140-208ENST00000473711 NRXN1Q9ULB1 1477 aa15.07■□□□□ 0
SP140-208ENST00000473711 MYO5BQ9ULV0 1848 aa15.06■□□□□ 0
SP140-208ENST00000473711 ST20-MTHFSA0A0A6YYL1 179 aa15.05■□□□□ -0
SP140-208ENST00000473711 ZFYVE9O95405 1425 aa15.05■□□□□ -0
SP140-208ENST00000473711 RIMS2Q9UQ26 1411 aa15.05■□□□□ -0
SP140-208ENST00000473711 NLRP1Q9C000 1473 aa15.04■□□□□ -0
SP140-208ENST00000473711 C11orf95C9JLR9 678 aaPredicted RBP15.04■□□□□ -0
SP140-208ENST00000473711 HDGFP51858 240 aaKnown RBP15.04■□□□□ -0
SP140-208ENST00000473711 CHRDL2Q6WN34 429 aa15.04■□□□□ -0
SP140-208ENST00000473711 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.04■□□□□ -0
SP140-208ENST00000473711 PIK3C2GO75747 1445 aa15.03■□□□□ -0
SP140-208ENST00000473711 DDX10Q13206 875 aaKnown RBP15.03■□□□□ -0
SP140-208ENST00000473711 TMEM132EQ6IEE7 984 aa15.02■□□□□ -0
SP140-208ENST00000473711 ILDR2Q71H61 639 aa15.02■□□□□ -0
SP140-208ENST00000473711 MKRN4PQ13434 485 aaPredicted RBP15.01□□□□□ -0.01
SP140-208ENST00000473711 THEMISQ8N1K5 641 aaPredicted RBP15.01□□□□□ -0.01
SP140-208ENST00000473711 TMEM2Q9UHN6 1383 aa15□□□□□ -0.01
SP140-208ENST00000473711 WASHC2AQ641Q2 1341 aa15□□□□□ -0.01
SP140-208ENST00000473711 SOCS7O14512 581 aa15□□□□□ -0.01
SP140-208ENST00000473711 KIAA1210Q9ULL0 1709 aa15□□□□□ -0.01
SP140-208ENST00000473711 LAMC1P11047 1609 aa14.99□□□□□ -0.01
SP140-208ENST00000473711 SPDYE2BA6NHP3 402 aa14.99□□□□□ -0.01
SP140-208ENST00000473711 SPDYE6P0CI01 402 aa14.99□□□□□ -0.01
SP140-208ENST00000473711 SPDYE2Q495Y8 402 aa14.99□□□□□ -0.01
SP140-208ENST00000473711 TXNDC2Q86VQ3 553 aa14.99□□□□□ -0.01
SP140-208ENST00000473711 REM2Q8IYK8 340 aaPredicted RBP14.99□□□□□ -0.01
SP140-208ENST00000473711 BCANQ96GW7 911 aa14.99□□□□□ -0.01
SP140-208ENST00000473711 UBR1Q8IWV7 1749 aa14.99□□□□□ -0.01
SP140-208ENST00000473711 SCAF11Q99590 1463 aaKnown RBP14.99□□□□□ -0.01
SP140-208ENST00000473711 PTPRMP28827 1452 aa14.98□□□□□ -0.01
SP140-208ENST00000473711 LTKP29376 864 aa14.98□□□□□ -0.01
SP140-208ENST00000473711 POLR3GLQ9BT43 218 aa14.98□□□□□ -0.01
SP140-208ENST00000473711 TRAK1Q9UPV9 953 aa14.98□□□□□ -0.01
SP140-208ENST00000473711 EID1Q9Y6B2 187 aa14.97□□□□□ -0.01
SP140-208ENST00000473711 CCDC7Q96M83 1385 aa14.97□□□□□ -0.01
SP140-208ENST00000473711 KIF7Q2M1P5 1343 aa14.96□□□□□ -0.01
SP140-208ENST00000473711 KDM5AP29375 1690 aaKnown RBP14.96□□□□□ -0.01
SP140-208ENST00000473711 SETBP1Q9Y6X0 1596 aa14.95□□□□□ -0.02
SP140-208ENST00000473711 TESK2Q96S53 571 aa14.95□□□□□ -0.02
SP140-208ENST00000473711 STK26Q9P289 416 aa14.95□□□□□ -0.02
SP140-208ENST00000473711 MYO3AQ8NEV4 1616 aa14.95□□□□□ -0.02
SP140-208ENST00000473711 EIF3AQ14152 1382 aaKnown RBP14.94□□□□□ -0.02
SP140-208ENST00000473711 ADGRB1O14514 1584 aa14.94□□□□□ -0.02
SP140-208ENST00000473711 ALKQ9UM73 1620 aa14.93□□□□□ -0.02
SP140-208ENST00000473711 IQGAP1P46940 1657 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms