RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 NCKAP5LQ9HCH0 1330 aa27.76■■■□□ 2.03
CTDSP1-207ENST00000473420 HDGFP51858 240 aaKnown RBP27.76■■■□□ 2.03
CTDSP1-207ENST00000473420 PPLO60437 1756 aa27.76■■■□□ 2.03
CTDSP1-207ENST00000473420 IQGAP1P46940 1657 aa27.75■■■□□ 2.03
CTDSP1-207ENST00000473420 DMRT2Q9Y5R5 561 aa27.75■■■□□ 2.03
CTDSP1-207ENST00000473420 IFT172Q9UG01 1749 aa27.75■■■□□ 2.03
CTDSP1-207ENST00000473420 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.74■■■□□ 2.03
CTDSP1-207ENST00000473420 LTKP29376 864 aa27.73■■■□□ 2.03
CTDSP1-207ENST00000473420 ZNF326Q5BKZ1 582 aaKnown RBP27.73■■■□□ 2.03
CTDSP1-207ENST00000473420 TXNDC2Q86VQ3 553 aa27.73■■■□□ 2.03
CTDSP1-207ENST00000473420 RPGRIP1LQ68CZ1 1315 aa27.72■■■□□ 2.03
CTDSP1-207ENST00000473420 NPHP4O75161 1426 aaPredicted RBP27.72■■■□□ 2.03
CTDSP1-207ENST00000473420 PLEKHG1Q9ULL1 1385 aa27.67■■■□□ 2.02
CTDSP1-207ENST00000473420 PPP1R15AO75807 674 aaPredicted RBP27.65■■■□□ 2.02
CTDSP1-207ENST00000473420 RGL3Q3MIN7 710 aa27.63■■■□□ 2.01
CTDSP1-207ENST00000473420 DIP2AQ14689 1571 aa27.61■■■□□ 2.01
CTDSP1-207ENST00000473420 SETBP1Q9Y6X0 1596 aa27.61■■■□□ 2.01
CTDSP1-207ENST00000473420 VGFO15240 615 aaPredicted RBP27.61■■■□□ 2.01
CTDSP1-207ENST00000473420 MYOM2P54296 1465 aa27.6■■■□□ 2.01
CTDSP1-207ENST00000473420 CLSPNQ9HAW4 1339 aa27.6■■■□□ 2.01
CTDSP1-207ENST00000473420 NRXN3Q9Y4C0 1643 aa27.59■■■□□ 2.01
CTDSP1-207ENST00000473420 NUTM2DQ5VT03 806 aaPredicted RBP27.59■■■□□ 2.01
CTDSP1-207ENST00000473420 SIN3AQ96ST3 1273 aa27.56■■■□□ 2
CTDSP1-207ENST00000473420 STAC3Q96MF2 364 aa27.55■■■□□ 2
CTDSP1-207ENST00000473420 ADAMTS13Q76LX8 1427 aa27.54■■■□□ 2
CTDSP1-207ENST00000473420 NRXN1Q9ULB1 1477 aa27.54■■■□□ 2
CTDSP1-207ENST00000473420 SETD1AO15047 1707 aaKnown RBP27.52■■■□□ 2
CTDSP1-207ENST00000473420 BCANQ96GW7 911 aa27.51■■□□□ 1.99
CTDSP1-207ENST00000473420 NEUROD1Q13562 356 aa27.5■■□□□ 1.99
CTDSP1-207ENST00000473420 TBX22Q9Y458 520 aa27.5■■□□□ 1.99
CTDSP1-207ENST00000473420 PIK3C2GO75747 1445 aa27.5■■□□□ 1.99
CTDSP1-207ENST00000473420 LAMC1P11047 1609 aa27.49■■□□□ 1.99
CTDSP1-207ENST00000473420 ADGRF5Q8IZF2 1346 aa27.49■■□□□ 1.99
CTDSP1-207ENST00000473420 DCAF11Q8TEB1 546 aa27.48■■□□□ 1.99
CTDSP1-207ENST00000473420 SLC26A8Q96RN1 970 aa27.48■■□□□ 1.99
CTDSP1-207ENST00000473420 ALKQ9UM73 1620 aa27.48■■□□□ 1.99
CTDSP1-207ENST00000473420 CHD2O14647 1828 aaKnown RBP27.48■■□□□ 1.99
CTDSP1-207ENST00000473420 CCER1Q8TC90 406 aaPredicted RBP27.47■■□□□ 1.99
CTDSP1-207ENST00000473420 PIK3R4Q99570 1358 aa27.47■■□□□ 1.99
CTDSP1-207ENST00000473420 NWD1Q149M9 1564 aa27.46■■□□□ 1.99
CTDSP1-207ENST00000473420 STRCP1A6NGW2 1772 aa27.45■■□□□ 1.98
CTDSP1-207ENST00000473420 LTBP4Q8N2S1 1624 aa27.44■■□□□ 1.98
CTDSP1-207ENST00000473420 SENP3Q9H4L4 574 aaPredicted RBP27.43■■□□□ 1.98
CTDSP1-207ENST00000473420 ZNF335Q9H4Z2 1342 aaPredicted RBP27.42■■□□□ 1.98
CTDSP1-207ENST00000473420 TONSLQ96HA7 1378 aa27.42■■□□□ 1.98
CTDSP1-207ENST00000473420 CPS1P31327 1500 aa27.41■■□□□ 1.98
CTDSP1-207ENST00000473420 L3MBTL2Q969R5 705 aa27.41■■□□□ 1.98
CTDSP1-207ENST00000473420 KDM2AQ9Y2K7 1162 aa27.4■■□□□ 1.98
CTDSP1-207ENST00000473420 KIAA1210Q9ULL0 1709 aa27.4■■□□□ 1.98
CTDSP1-207ENST00000473420 XRN1Q8IZH2 1706 aaKnown RBP27.38■■□□□ 1.97
CTDSP1-207ENST00000473420 KCNA6P17658 529 aa27.37■■□□□ 1.97
CTDSP1-207ENST00000473420 PRAG1Q86YV5 1406 aa27.37■■□□□ 1.97
CTDSP1-207ENST00000473420 NKTRP30414 1462 aaKnown RBP27.37■■□□□ 1.97
CTDSP1-207ENST00000473420 METP08581 1390 aa27.36■■□□□ 1.97
CTDSP1-207ENST00000473420 C14orf93Q9H972 538 aaKnown RBP27.35■■□□□ 1.97
CTDSP1-207ENST00000473420 TIMELESSQ9UNS1 1208 aa27.34■■□□□ 1.97
CTDSP1-207ENST00000473420 ASXL1Q8IXJ9 1541 aa27.34■■□□□ 1.97
CTDSP1-207ENST00000473420 PTPRUQ92729 1446 aa27.33■■□□□ 1.97
CTDSP1-207ENST00000473420 KNDC1Q76NI1 1749 aa27.32■■□□□ 1.96
CTDSP1-207ENST00000473420 CFAP70Q5T0N1 1121 aa27.3■■□□□ 1.96
CTDSP1-207ENST00000473420 ADGRB1O14514 1584 aa27.3■■□□□ 1.96
CTDSP1-207ENST00000473420 IQSEC2Q5JU85 1478 aa27.29■■□□□ 1.96
CTDSP1-207ENST00000473420 TRPM1Q7Z4N2 1603 aa27.29■■□□□ 1.96
CTDSP1-207ENST00000473420 LRRC7Q96NW7 1537 aa27.28■■□□□ 1.96
CTDSP1-207ENST00000473420 AMOTL2Q9Y2J4 779 aa27.28■■□□□ 1.96
CTDSP1-207ENST00000473420 XIRP1Q702N8 1843 aaKnown RBP27.27■■□□□ 1.96
CTDSP1-207ENST00000473420 PTCH1Q13635 1447 aa27.25■■□□□ 1.95
CTDSP1-207ENST00000473420 TECPR2O15040 1411 aa27.24■■□□□ 1.95
CTDSP1-207ENST00000473420 YTHDC2Q9H6S0 1430 aaKnown RBP27.24■■□□□ 1.95
CTDSP1-207ENST00000473420 LRPPRCP42704 1394 aaKnown RBP27.24■■□□□ 1.95
CTDSP1-207ENST00000473420 ABCC11Q96J66 1382 aa27.22■■□□□ 1.95
CTDSP1-207ENST00000473420 TMEM132EQ6IEE7 984 aa27.21■■□□□ 1.95
CTDSP1-207ENST00000473420 CERKQ8TCT0 537 aa27.21■■□□□ 1.95
CTDSP1-207ENST00000473420 NCOA3Q9Y6Q9 1424 aa27.21■■□□□ 1.95
CTDSP1-207ENST00000473420 PROSER2Q86WR7 435 aaPredicted RBP27.19■■□□□ 1.94
CTDSP1-207ENST00000473420 DLC1Q96QB1 1528 aa27.19■■□□□ 1.94
CTDSP1-207ENST00000473420 TMEM94Q12767 1356 aa27.18■■□□□ 1.94
CTDSP1-207ENST00000473420 NBPF8Q3BBV2 869 aa27.17■■□□□ 1.94
CTDSP1-207ENST00000473420 RALGAPBQ86X10 1494 aa27.16■■□□□ 1.94
CTDSP1-207ENST00000473420 ROBO2Q9HCK4 1378 aa27.15■■□□□ 1.94
CTDSP1-207ENST00000473420 FAM135BQ49AJ0 1406 aa27.15■■□□□ 1.94
CTDSP1-207ENST00000473420 ARHGEF28Q8N1W1 1705 aaKnown RBP27.14■■□□□ 1.94
CTDSP1-207ENST00000473420 SIRT1Q96EB6 747 aa27.14■■□□□ 1.94
CTDSP1-207ENST00000473420 STK26Q9P289 416 aa27.13■■□□□ 1.93
CTDSP1-207ENST00000473420 GPRASP1Q5JY77 1395 aa27.12■■□□□ 1.93
CTDSP1-207ENST00000473420 NBPF1Q3BBV0 1214 aa27.12■■□□□ 1.93
CTDSP1-207ENST00000473420 ROCK2O75116 1388 aaKnown RBP27.11■■□□□ 1.93
CTDSP1-207ENST00000473420 NALCNQ8IZF0 1738 aa27.11■■□□□ 1.93
CTDSP1-207ENST00000473420 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.08■■□□□ 1.93
CTDSP1-207ENST00000473420 ADGRL3Q9HAR2 1447 aa27.07■■□□□ 1.92
CTDSP1-207ENST00000473420 MSH6P52701 1360 aa27.07■■□□□ 1.92
CTDSP1-207ENST00000473420 RBM33Q96EV2 1170 aaKnown RBP27.06■■□□□ 1.92
CTDSP1-207ENST00000473420 TRAK1Q9UPV9 953 aa27.06■■□□□ 1.92
CTDSP1-207ENST00000473420 DCCP43146 1447 aa27.06■■□□□ 1.92
CTDSP1-207ENST00000473420 PLEKHH1Q9ULM0 1364 aa27.02■■□□□ 1.92
CTDSP1-207ENST00000473420 C14orf37Q86TY3 774 aa27.02■■□□□ 1.92
CTDSP1-207ENST00000473420 C19orf44Q9H6X5 657 aa27.02■■□□□ 1.92
CTDSP1-207ENST00000473420 CDC42BPGQ6DT37 1551 aa27.01■■□□□ 1.92
CTDSP1-207ENST00000473420 WAPLQ7Z5K2 1190 aa27.01■■□□□ 1.91
CTDSP1-207ENST00000473420 PRAM1Q96QH2 718 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms