RNA–Protein interactions for RNA: ENST00000471724.5

SSR4-207, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-207ENST00000471724 ZFYVE9O95405 1425 aa20.46■□□□□ 0.87
SSR4-207ENST00000471724 RIMS2Q9UQ26 1411 aa20.45■□□□□ 0.86
SSR4-207ENST00000471724 IQGAP1P46940 1657 aa20.45■□□□□ 0.86
SSR4-207ENST00000471724 ANKLE2Q86XL3 938 aa20.45■□□□□ 0.86
SSR4-207ENST00000471724 ZNF326Q5BKZ1 582 aaKnown RBP20.42■□□□□ 0.86
SSR4-207ENST00000471724 MED14O60244 1454 aa20.42■□□□□ 0.86
SSR4-207ENST00000471724 HDGFP51858 240 aaKnown RBP20.41■□□□□ 0.86
SSR4-207ENST00000471724 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.41■□□□□ 0.86
SSR4-207ENST00000471724 EID1Q9Y6B2 187 aa20.41■□□□□ 0.86
SSR4-207ENST00000471724 RPGRIP1LQ68CZ1 1315 aa20.41■□□□□ 0.86
SSR4-207ENST00000471724 MYOM2P54296 1465 aa20.4■□□□□ 0.86
SSR4-207ENST00000471724 CCER1Q8TC90 406 aaPredicted RBP20.4■□□□□ 0.86
SSR4-207ENST00000471724 CERKQ8TCT0 537 aa20.4■□□□□ 0.86
SSR4-207ENST00000471724 FBXO41Q8TF61 875 aa20.39■□□□□ 0.85
SSR4-207ENST00000471724 ILDR1Q86SU0 546 aaPredicted RBP20.38■□□□□ 0.85
SSR4-207ENST00000471724 DIP2AQ14689 1571 aa20.38■□□□□ 0.85
SSR4-207ENST00000471724 PPP1R15AO75807 674 aaPredicted RBP20.37■□□□□ 0.85
SSR4-207ENST00000471724 LAMC1P11047 1609 aa20.37■□□□□ 0.85
SSR4-207ENST00000471724 SETBP1Q9Y6X0 1596 aa20.37■□□□□ 0.85
SSR4-207ENST00000471724 NPHP4O75161 1426 aaPredicted RBP20.36■□□□□ 0.85
SSR4-207ENST00000471724 TXNDC2Q86VQ3 553 aa20.36■□□□□ 0.85
SSR4-207ENST00000471724 PLEKHG1Q9ULL1 1385 aa20.35■□□□□ 0.85
SSR4-207ENST00000471724 RGL3Q3MIN7 710 aa20.35■□□□□ 0.85
SSR4-207ENST00000471724 LTBP4Q8N2S1 1624 aa20.35■□□□□ 0.85
SSR4-207ENST00000471724 NRXN3Q9Y4C0 1643 aa20.35■□□□□ 0.85
SSR4-207ENST00000471724 SIN3AQ96ST3 1273 aa20.33■□□□□ 0.85
SSR4-207ENST00000471724 TONSLQ96HA7 1378 aa20.33■□□□□ 0.84
SSR4-207ENST00000471724 IQSEC2Q5JU85 1478 aa20.32■□□□□ 0.84
SSR4-207ENST00000471724 VGFO15240 615 aaPredicted RBP20.32■□□□□ 0.84
SSR4-207ENST00000471724 LTKP29376 864 aa20.32■□□□□ 0.84
SSR4-207ENST00000471724 NEUROD1Q13562 356 aa20.32■□□□□ 0.84
SSR4-207ENST00000471724 STAC3Q96MF2 364 aa20.32■□□□□ 0.84
SSR4-207ENST00000471724 NRXN1Q9ULB1 1477 aa20.31■□□□□ 0.84
SSR4-207ENST00000471724 SETD1AO15047 1707 aaKnown RBP20.31■□□□□ 0.84
SSR4-207ENST00000471724 ZNF335Q9H4Z2 1342 aaPredicted RBP20.3■□□□□ 0.84
SSR4-207ENST00000471724 PIK3C2GO75747 1445 aa20.29■□□□□ 0.84
SSR4-207ENST00000471724 KIAA1210Q9ULL0 1709 aa20.28■□□□□ 0.84
SSR4-207ENST00000471724 NUTM2DQ5VT03 806 aaPredicted RBP20.26■□□□□ 0.83
SSR4-207ENST00000471724 DCAF11Q8TEB1 546 aa20.26■□□□□ 0.83
SSR4-207ENST00000471724 ALKQ9UM73 1620 aa20.26■□□□□ 0.83
SSR4-207ENST00000471724 CPS1P31327 1500 aa20.26■□□□□ 0.83
SSR4-207ENST00000471724 ADAMTS13Q76LX8 1427 aa20.25■□□□□ 0.83
SSR4-207ENST00000471724 BCANQ96GW7 911 aa20.24■□□□□ 0.83
SSR4-207ENST00000471724 CHD2O14647 1828 aaKnown RBP20.23■□□□□ 0.83
SSR4-207ENST00000471724 NWD1Q149M9 1564 aa20.23■□□□□ 0.83
SSR4-207ENST00000471724 L3MBTL2Q969R5 705 aa20.23■□□□□ 0.83
SSR4-207ENST00000471724 TIMELESSQ9UNS1 1208 aa20.23■□□□□ 0.83
SSR4-207ENST00000471724 ADGRF5Q8IZF2 1346 aa20.23■□□□□ 0.83
SSR4-207ENST00000471724 PRAG1Q86YV5 1406 aa20.22■□□□□ 0.83
SSR4-207ENST00000471724 TRPM1Q7Z4N2 1603 aa20.21■□□□□ 0.83
SSR4-207ENST00000471724 PIK3R4Q99570 1358 aa20.21■□□□□ 0.83
SSR4-207ENST00000471724 XRN1Q8IZH2 1706 aaKnown RBP20.2■□□□□ 0.82
SSR4-207ENST00000471724 KDM2AQ9Y2K7 1162 aa20.2■□□□□ 0.82
SSR4-207ENST00000471724 KNDC1Q76NI1 1749 aa20.19■□□□□ 0.82
SSR4-207ENST00000471724 TBX22Q9Y458 520 aa20.18■□□□□ 0.82
SSR4-207ENST00000471724 ASXL1Q8IXJ9 1541 aa20.17■□□□□ 0.82
SSR4-207ENST00000471724 STRCP1A6NGW2 1772 aa20.17■□□□□ 0.82
SSR4-207ENST00000471724 SLC26A8Q96RN1 970 aa20.17■□□□□ 0.82
SSR4-207ENST00000471724 NKTRP30414 1462 aaKnown RBP20.17■□□□□ 0.82
SSR4-207ENST00000471724 ADGRB1O14514 1584 aa20.14■□□□□ 0.81
SSR4-207ENST00000471724 SENP3Q9H4L4 574 aaPredicted RBP20.14■□□□□ 0.81
SSR4-207ENST00000471724 RALGAPBQ86X10 1494 aa20.13■□□□□ 0.81
SSR4-207ENST00000471724 C14orf93Q9H972 538 aaKnown RBP20.12■□□□□ 0.81
SSR4-207ENST00000471724 METP08581 1390 aa20.11■□□□□ 0.81
SSR4-207ENST00000471724 PTCH1Q13635 1447 aa20.1■□□□□ 0.81
SSR4-207ENST00000471724 LRRC7Q96NW7 1537 aa20.09■□□□□ 0.81
SSR4-207ENST00000471724 UBAP1LF5GYI3 381 aa20.09■□□□□ 0.81
SSR4-207ENST00000471724 CFAP70Q5T0N1 1121 aa20.09■□□□□ 0.81
SSR4-207ENST00000471724 ARHGEF28Q8N1W1 1705 aaKnown RBP20.09■□□□□ 0.81
SSR4-207ENST00000471724 TECPR2O15040 1411 aa20.09■□□□□ 0.81
SSR4-207ENST00000471724 PTPRUQ92729 1446 aa20.08■□□□□ 0.8
SSR4-207ENST00000471724 YTHDC2Q9H6S0 1430 aaKnown RBP20.08■□□□□ 0.8
SSR4-207ENST00000471724 LRPPRCP42704 1394 aaKnown RBP20.08■□□□□ 0.8
SSR4-207ENST00000471724 DLC1Q96QB1 1528 aa20.07■□□□□ 0.8
SSR4-207ENST00000471724 TOM1O60784 492 aa20.07■□□□□ 0.8
SSR4-207ENST00000471724 KCNA6P17658 529 aa20.07■□□□□ 0.8
SSR4-207ENST00000471724 XIRP1Q702N8 1843 aaKnown RBP20.06■□□□□ 0.8
SSR4-207ENST00000471724 ROCK2O75116 1388 aaKnown RBP20.06■□□□□ 0.8
SSR4-207ENST00000471724 GPRASP1Q5JY77 1395 aa20.04■□□□□ 0.8
SSR4-207ENST00000471724 NBPF8Q3BBV2 869 aa20.03■□□□□ 0.8
SSR4-207ENST00000471724 ABCC11Q96J66 1382 aa20.03■□□□□ 0.8
SSR4-207ENST00000471724 AMOTL2Q9Y2J4 779 aa20.02■□□□□ 0.8
SSR4-207ENST00000471724 TMEM132EQ6IEE7 984 aa20.01■□□□□ 0.79
SSR4-207ENST00000471724 NALCNQ8IZF0 1738 aa20.01■□□□□ 0.79
SSR4-207ENST00000471724 FAM135BQ49AJ0 1406 aa20.01■□□□□ 0.79
SSR4-207ENST00000471724 PROSER2Q86WR7 435 aaPredicted RBP19.99■□□□□ 0.79
SSR4-207ENST00000471724 NCOA3Q9Y6Q9 1424 aa19.99■□□□□ 0.79
SSR4-207ENST00000471724 QRICH2Q9H0J4 1663 aa19.98■□□□□ 0.79
SSR4-207ENST00000471724 EIF3AQ14152 1382 aaKnown RBP19.97■□□□□ 0.79
SSR4-207ENST00000471724 ROBO2Q9HCK4 1378 aa19.97■□□□□ 0.79
SSR4-207ENST00000471724 NBPF1Q3BBV0 1214 aa19.97■□□□□ 0.79
SSR4-207ENST00000471724 TMEM94Q12767 1356 aa19.96■□□□□ 0.79
SSR4-207ENST00000471724 STK26Q9P289 416 aa19.96■□□□□ 0.79
SSR4-207ENST00000471724 SCAF1Q9H7N4 1312 aaKnown RBP19.96■□□□□ 0.79
SSR4-207ENST00000471724 ADGRB2O60241 1585 aa19.95■□□□□ 0.78
SSR4-207ENST00000471724 ADGRL3Q9HAR2 1447 aa19.94■□□□□ 0.78
SSR4-207ENST00000471724 PIP4K2BP78356 416 aa19.94■□□□□ 0.78
SSR4-207ENST00000471724 SIRT1Q96EB6 747 aa19.94■□□□□ 0.78
SSR4-207ENST00000471724 CARD11Q9BXL7 1154 aa19.94■□□□□ 0.78
SSR4-207ENST00000471724 CDC42BPGQ6DT37 1551 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms