RNA–Protein interactions for RNA: ENST00000471396.1

TRIM59-204, Transcript of tripartite motif containing 59, humanhuman

TSL 4

Gene TRIM59, Length 548 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-204ENST00000471396 ZNF219Q9P2Y4 722 aaPredicted RBP11.52□□□□□ -0.57
TRIM59-204ENST00000471396 ARHGAP23Q9P227 1491 aa11.51□□□□□ -0.57
TRIM59-204ENST00000471396 SLIT1O75093 1534 aa11.51□□□□□ -0.57
TRIM59-204ENST00000471396 SLC52A1Q9NWF4 448 aa11.51□□□□□ -0.57
TRIM59-204ENST00000471396 MED14O60244 1454 aa11.51□□□□□ -0.57
TRIM59-204ENST00000471396 IDI1Q13907 227 aa11.5□□□□□ -0.57
TRIM59-204ENST00000471396 ANKLE2Q86XL3 938 aa11.5□□□□□ -0.57
TRIM59-204ENST00000471396 NPHP4O75161 1426 aaPredicted RBP11.5□□□□□ -0.57
TRIM59-204ENST00000471396 SCAF11Q99590 1463 aaKnown RBP11.5□□□□□ -0.57
TRIM59-204ENST00000471396 SPHKAPQ2M3C7 1700 aa11.49□□□□□ -0.57
TRIM59-204ENST00000471396 STAG3Q9UJ98 1225 aa11.49□□□□□ -0.57
TRIM59-204ENST00000471396 TMEM2Q9UHN6 1383 aa11.49□□□□□ -0.57
TRIM59-204ENST00000471396 IQGAP1P46940 1657 aa11.49□□□□□ -0.57
TRIM59-204ENST00000471396 TMEM131LA2VDJ0 1609 aa11.47□□□□□ -0.57
TRIM59-204ENST00000471396 LTBP4Q8N2S1 1624 aa11.47□□□□□ -0.57
TRIM59-204ENST00000471396 TRPM2O94759 1503 aa11.47□□□□□ -0.57
TRIM59-204ENST00000471396 TRIM52Q96A61 297 aa11.47□□□□□ -0.57
TRIM59-204ENST00000471396 MYO5BQ9ULV0 1848 aa11.46□□□□□ -0.57
TRIM59-204ENST00000471396 SETD5Q9C0A6 1442 aa11.46□□□□□ -0.57
TRIM59-204ENST00000471396 ZNF335Q9H4Z2 1342 aaPredicted RBP11.45□□□□□ -0.58
TRIM59-204ENST00000471396 EID1Q9Y6B2 187 aa11.45□□□□□ -0.58
TRIM59-204ENST00000471396 ACIN1Q9UKV3 1341 aaKnown RBP11.44□□□□□ -0.58
TRIM59-204ENST00000471396 LTKP29376 864 aa11.44□□□□□ -0.58
TRIM59-204ENST00000471396 TXNDC2Q86VQ3 553 aa11.44□□□□□ -0.58
TRIM59-204ENST00000471396 CERKQ8TCT0 537 aa11.44□□□□□ -0.58
TRIM59-204ENST00000471396 CLTCL1P53675 1640 aa11.44□□□□□ -0.58
TRIM59-204ENST00000471396 ZFYVE9O95405 1425 aa11.43□□□□□ -0.58
TRIM59-204ENST00000471396 RAB3GAP2Q9H2M9 1393 aa11.43□□□□□ -0.58
TRIM59-204ENST00000471396 IQSEC2Q5JU85 1478 aa11.43□□□□□ -0.58
TRIM59-204ENST00000471396 RIMS2Q9UQ26 1411 aa11.43□□□□□ -0.58
TRIM59-204ENST00000471396 CHGAP10645 457 aaKnown RBP11.42□□□□□ -0.58
TRIM59-204ENST00000471396 CPS1P31327 1500 aa11.41□□□□□ -0.58
TRIM59-204ENST00000471396 FBXO41Q8TF61 875 aa11.4□□□□□ -0.58
TRIM59-204ENST00000471396 MPHOSPH9Q99550 1183 aa11.4□□□□□ -0.58
TRIM59-204ENST00000471396 PLEKHG1Q9ULL1 1385 aa11.4□□□□□ -0.59
TRIM59-204ENST00000471396 KIF1BO60333 1816 aa11.39□□□□□ -0.59
TRIM59-204ENST00000471396 ABCB7O75027 752 aa11.39□□□□□ -0.59
TRIM59-204ENST00000471396 HDGFP51858 240 aaKnown RBP11.39□□□□□ -0.59
TRIM59-204ENST00000471396 ILDR1Q86SU0 546 aaPredicted RBP11.39□□□□□ -0.59
TRIM59-204ENST00000471396 PPP1R15AO75807 674 aaPredicted RBP11.38□□□□□ -0.59
TRIM59-204ENST00000471396 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.38□□□□□ -0.59
TRIM59-204ENST00000471396 STRCP1A6NGW2 1772 aa11.37□□□□□ -0.59
TRIM59-204ENST00000471396 CCDC144AA2RUR9 1427 aa11.36□□□□□ -0.59
TRIM59-204ENST00000471396 NEXMIFQ5QGS0 1516 aa11.36□□□□□ -0.59
TRIM59-204ENST00000471396 DIP2AQ14689 1571 aa11.36□□□□□ -0.59
TRIM59-204ENST00000471396 HRCP23327 699 aa11.35□□□□□ -0.59
TRIM59-204ENST00000471396 NWD1Q149M9 1564 aa11.35□□□□□ -0.59
TRIM59-204ENST00000471396 POLA2Q14181 598 aa11.34□□□□□ -0.59
TRIM59-204ENST00000471396 FKBP8Q14318 412 aa11.34□□□□□ -0.59
TRIM59-204ENST00000471396 ZNF326Q5BKZ1 582 aaKnown RBP11.34□□□□□ -0.59
TRIM59-204ENST00000471396 NUTM2DQ5VT03 806 aaPredicted RBP11.34□□□□□ -0.59
TRIM59-204ENST00000471396 BCANQ96GW7 911 aa11.34□□□□□ -0.59
TRIM59-204ENST00000471396 SLC26A8Q96RN1 970 aa11.34□□□□□ -0.59
TRIM59-204ENST00000471396 ADAMTS13Q76LX8 1427 aa11.34□□□□□ -0.59
TRIM59-204ENST00000471396 SETBP1Q9Y6X0 1596 aa11.33□□□□□ -0.6
TRIM59-204ENST00000471396 NRXN3Q9Y4C0 1643 aa11.33□□□□□ -0.6
TRIM59-204ENST00000471396 LRRC7Q96NW7 1537 aa11.33□□□□□ -0.6
TRIM59-204ENST00000471396 NKTRP30414 1462 aaKnown RBP11.32□□□□□ -0.6
TRIM59-204ENST00000471396 SPATA31E1Q6ZUB1 1445 aa11.32□□□□□ -0.6
TRIM59-204ENST00000471396 PPLO60437 1756 aa11.31□□□□□ -0.6
TRIM59-204ENST00000471396 KCNA6P17658 529 aa11.31□□□□□ -0.6
TRIM59-204ENST00000471396 TBX22Q9Y458 520 aa11.31□□□□□ -0.6
TRIM59-204ENST00000471396 CHD2O14647 1828 aaKnown RBP11.3□□□□□ -0.6
TRIM59-204ENST00000471396 PIK3R4Q99570 1358 aa11.3□□□□□ -0.6
TRIM59-204ENST00000471396 RPGRIP1LQ68CZ1 1315 aa11.3□□□□□ -0.6
TRIM59-204ENST00000471396 UBAP1LF5GYI3 381 aa11.29□□□□□ -0.6
TRIM59-204ENST00000471396 XIRP1Q702N8 1843 aaKnown RBP11.29□□□□□ -0.6
TRIM59-204ENST00000471396 IFT172Q9UG01 1749 aa11.29□□□□□ -0.6
TRIM59-204ENST00000471396 ANKRD30BQ9BXX2 1392 aa11.28□□□□□ -0.6
TRIM59-204ENST00000471396 TMEM94Q12767 1356 aa11.28□□□□□ -0.6
TRIM59-204ENST00000471396 VGFO15240 615 aaPredicted RBP11.27□□□□□ -0.61
TRIM59-204ENST00000471396 SETD1AO15047 1707 aaKnown RBP11.26□□□□□ -0.61
TRIM59-204ENST00000471396 XRN1Q8IZH2 1706 aaKnown RBP11.26□□□□□ -0.61
TRIM59-204ENST00000471396 ALKQ9UM73 1620 aa11.26□□□□□ -0.61
TRIM59-204ENST00000471396 PTPRUQ92729 1446 aa11.26□□□□□ -0.61
TRIM59-204ENST00000471396 TOM1O60784 492 aa11.25□□□□□ -0.61
TRIM59-204ENST00000471396 RGL3Q3MIN7 710 aa11.25□□□□□ -0.61
TRIM59-204ENST00000471396 PROSER2Q86WR7 435 aaPredicted RBP11.25□□□□□ -0.61
TRIM59-204ENST00000471396 METP08581 1390 aa11.25□□□□□ -0.61
TRIM59-204ENST00000471396 MKRN4PQ13434 485 aaPredicted RBP11.24□□□□□ -0.61
TRIM59-204ENST00000471396 MYOM2P54296 1465 aa11.24□□□□□ -0.61
TRIM59-204ENST00000471396 TRIM26Q12899 539 aaPredicted RBP11.23□□□□□ -0.61
TRIM59-204ENST00000471396 AMOTL2Q9Y2J4 779 aa11.23□□□□□ -0.61
TRIM59-204ENST00000471396 ADGRF5Q8IZF2 1346 aa11.23□□□□□ -0.61
TRIM59-204ENST00000471396 PIK3C2GO75747 1445 aa11.23□□□□□ -0.61
TRIM59-204ENST00000471396 NCOA3Q9Y6Q9 1424 aa11.23□□□□□ -0.61
TRIM59-204ENST00000471396 PRAG1Q86YV5 1406 aa11.22□□□□□ -0.61
TRIM59-204ENST00000471396 NRXN1Q9ULB1 1477 aa11.22□□□□□ -0.61
TRIM59-204ENST00000471396 PTCH1Q13635 1447 aa11.21□□□□□ -0.61
TRIM59-204ENST00000471396 MSH6P52701 1360 aa11.21□□□□□ -0.61
TRIM59-204ENST00000471396 RBM33Q96EV2 1170 aaKnown RBP11.21□□□□□ -0.61
TRIM59-204ENST00000471396 LAMC1P11047 1609 aa11.2□□□□□ -0.62
TRIM59-204ENST00000471396 PIP4K2BP78356 416 aa11.2□□□□□ -0.62
TRIM59-204ENST00000471396 ASXL1Q8IXJ9 1541 aa11.19□□□□□ -0.62
TRIM59-204ENST00000471396 C14orf37Q86TY3 774 aa11.18□□□□□ -0.62
TRIM59-204ENST00000471396 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.18□□□□□ -0.62
TRIM59-204ENST00000471396 DCCP43146 1447 aa11.18□□□□□ -0.62
TRIM59-204ENST00000471396 KNDC1Q76NI1 1749 aa11.17□□□□□ -0.62
TRIM59-204ENST00000471396 ADGRL3Q9HAR2 1447 aa11.17□□□□□ -0.62
TRIM59-204ENST00000471396 LRPPRCP42704 1394 aaKnown RBP11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms