RNA–Protein interactions for RNA: ENST00000469223.5

HDAC6-217, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 796 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-217ENST00000469223 TSPY10P0CW01 314 aa20.5■□□□□ 0.87
HDAC6-217ENST00000469223 STAG3Q9UJ98 1225 aa20.5■□□□□ 0.87
HDAC6-217ENST00000469223 MYO5BQ9ULV0 1848 aa20.5■□□□□ 0.87
HDAC6-217ENST00000469223 AFF2P51816 1311 aa20.5■□□□□ 0.87
HDAC6-217ENST00000469223 DUOX2Q9NRD8 1548 aa20.48■□□□□ 0.87
HDAC6-217ENST00000469223 NUTM2BA6NNL0 878 aaPredicted RBP20.46■□□□□ 0.87
HDAC6-217ENST00000469223 NUTM2EB1AL46 878 aaPredicted RBP20.46■□□□□ 0.87
HDAC6-217ENST00000469223 NUTM2AQ8IVF1 878 aaPredicted RBP20.46■□□□□ 0.87
HDAC6-217ENST00000469223 NHSL1Q5SYE7 1610 aa20.43■□□□□ 0.86
HDAC6-217ENST00000469223 CROCC2H7BZ55 1655 aa20.43■□□□□ 0.86
HDAC6-217ENST00000469223 NUTM2DQ5VT03 806 aaPredicted RBP20.43■□□□□ 0.86
HDAC6-217ENST00000469223 GCC2Q8IWJ2 1684 aa20.42■□□□□ 0.86
HDAC6-217ENST00000469223 BCANQ96GW7 911 aa20.41■□□□□ 0.86
HDAC6-217ENST00000469223 ATAD2Q6PL18 1390 aa20.4■□□□□ 0.86
HDAC6-217ENST00000469223 C14orf37Q86TY3 774 aa20.39■□□□□ 0.85
HDAC6-217ENST00000469223 ZRANB1Q9UGI0 708 aa20.39■□□□□ 0.85
HDAC6-217ENST00000469223 ASXL1Q8IXJ9 1541 aa20.38■□□□□ 0.85
HDAC6-217ENST00000469223 IDI1Q13907 227 aa20.38■□□□□ 0.85
HDAC6-217ENST00000469223 ERBINQ96RT1 1412 aa20.37■□□□□ 0.85
HDAC6-217ENST00000469223 RBM6P78332 1123 aaKnown RBP20.37■□□□□ 0.85
HDAC6-217ENST00000469223 NCOA3Q9Y6Q9 1424 aa20.36■□□□□ 0.85
HDAC6-217ENST00000469223 C8orf37Q96NL8 207 aa20.35■□□□□ 0.85
HDAC6-217ENST00000469223 LMTK2Q8IWU2 1503 aa20.35■□□□□ 0.85
HDAC6-217ENST00000469223 ZFYVE9O95405 1425 aa20.35■□□□□ 0.85
HDAC6-217ENST00000469223 KIF15Q9NS87 1388 aa20.34■□□□□ 0.85
HDAC6-217ENST00000469223 PLEKHG1Q9ULL1 1385 aa20.34■□□□□ 0.85
HDAC6-217ENST00000469223 QTRT2Q9H974 415 aaKnown RBP20.34■□□□□ 0.85
HDAC6-217ENST00000469223 CADPS2Q86UW7 1296 aa20.33■□□□□ 0.85
HDAC6-217ENST00000469223 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.33■□□□□ 0.852e-7■■□□□ 13.8
HDAC6-217ENST00000469223 SETD5Q9C0A6 1442 aa20.33■□□□□ 0.84
HDAC6-217ENST00000469223 ATF3P18847 181 aa20.32■□□□□ 0.84
HDAC6-217ENST00000469223 FOXD1Q16676 465 aa20.32■□□□□ 0.84
HDAC6-217ENST00000469223 BRINP3Q76B58 766 aa20.32■□□□□ 0.84
HDAC6-217ENST00000469223 NOS1P29475 1434 aa20.32■□□□□ 0.84
HDAC6-217ENST00000469223 KANK1Q14678 1352 aa20.31■□□□□ 0.84
HDAC6-217ENST00000469223 LRP5O75197 1615 aa20.31■□□□□ 0.84
HDAC6-217ENST00000469223 RIMS2Q9UQ26 1411 aa20.28■□□□□ 0.84
HDAC6-217ENST00000469223 TMEM131LA2VDJ0 1609 aa20.28■□□□□ 0.84
HDAC6-217ENST00000469223 PPP1R15AO75807 674 aaPredicted RBP20.27■□□□□ 0.84
HDAC6-217ENST00000469223 C19orf44Q9H6X5 657 aa20.27■□□□□ 0.84
HDAC6-217ENST00000469223 PNPLA6Q8IY17 1366 aa20.26■□□□□ 0.83
HDAC6-217ENST00000469223 NGLY1Q96IV0 654 aa20.25■□□□□ 0.83
HDAC6-217ENST00000469223 DCCP43146 1447 aa20.25■□□□□ 0.83
HDAC6-217ENST00000469223 MYOM3Q5VTT5 1437 aa20.25■□□□□ 0.83
HDAC6-217ENST00000469223 ADAMTS13Q76LX8 1427 aa20.25■□□□□ 0.83
HDAC6-217ENST00000469223 TRPM2O94759 1503 aa20.23■□□□□ 0.83
HDAC6-217ENST00000469223 MST1RQ04912 1400 aa20.23■□□□□ 0.83
HDAC6-217ENST00000469223 XRN1Q8IZH2 1706 aaKnown RBP20.22■□□□□ 0.83
HDAC6-217ENST00000469223 ADAMTS2O95450 1211 aa20.2■□□□□ 0.82
HDAC6-217ENST00000469223 RRP7BPQ9NSQ0 103 aa20.2■□□□□ 0.82
HDAC6-217ENST00000469223 TBX22Q9Y458 520 aa20.2■□□□□ 0.82
HDAC6-217ENST00000469223 SLC52A1Q9NWF4 448 aa20.19■□□□□ 0.82
HDAC6-217ENST00000469223 NALCNQ8IZF0 1738 aa20.19■□□□□ 0.82
HDAC6-217ENST00000469223 UNC13BO14795 1591 aa20.18■□□□□ 0.82
HDAC6-217ENST00000469223 LRRC59Q96AG4 307 aaKnown RBP20.18■□□□□ 0.82
HDAC6-217ENST00000469223 PIK3R4Q99570 1358 aa20.18■□□□□ 0.82
HDAC6-217ENST00000469223 DDX17Q92841 729 aaKnown RBP20.17■□□□□ 0.82
HDAC6-217ENST00000469223 ABCC5O15440 1437 aa20.17■□□□□ 0.82
HDAC6-217ENST00000469223 ATRNO75882 1429 aa20.17■□□□□ 0.82
HDAC6-217ENST00000469223 PTPRUQ92729 1446 aa20.17■□□□□ 0.82
HDAC6-217ENST00000469223 RPRD2Q5VT52 1461 aaKnown RBP20.16■□□□□ 0.82
HDAC6-217ENST00000469223 MARF1Q9Y4F3 1742 aaKnown RBP20.16■□□□□ 0.82
HDAC6-217ENST00000469223 USP21Q9UK80 565 aa20.15■□□□□ 0.82
HDAC6-217ENST00000469223 LAMC1P11047 1609 aa20.15■□□□□ 0.82
HDAC6-217ENST00000469223 PTPN23Q9H3S7 1636 aa20.15■□□□□ 0.82
HDAC6-217ENST00000469223 TRPC5Q9UL62 973 aaPredicted RBP20.14■□□□□ 0.81
HDAC6-217ENST00000469223 NRXN3Q9Y4C0 1643 aa20.13■□□□□ 0.81
HDAC6-217ENST00000469223 BRWD3Q6RI45 1802 aa20.12■□□□□ 0.81
HDAC6-217ENST00000469223 COL22A1Q8NFW1 1626 aaPredicted RBP20.12■□□□□ 0.81
HDAC6-217ENST00000469223 DAPK1P53355 1430 aa20.11■□□□□ 0.81
HDAC6-217ENST00000469223 HDGFP51858 240 aaKnown RBP20.11■□□□□ 0.81
HDAC6-217ENST00000469223 CCDC125Q86Z20 511 aa20.11■□□□□ 0.81
HDAC6-217ENST00000469223 AMOTL2Q9Y2J4 779 aa20.1■□□□□ 0.81
HDAC6-217ENST00000469223 PTCH1Q13635 1447 aa20.1■□□□□ 0.81
HDAC6-217ENST00000469223 BLMP54132 1417 aaPredicted RBP20.09■□□□□ 0.81
HDAC6-217ENST00000469223 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.08■□□□□ 0.81
HDAC6-217ENST00000469223 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.08■□□□□ 0.81
HDAC6-217ENST00000469223 ADGRL3Q9HAR2 1447 aa20.08■□□□□ 0.8
HDAC6-217ENST00000469223 CHGAP10645 457 aaKnown RBP20.06■□□□□ 0.8
HDAC6-217ENST00000469223 SPHKAPQ2M3C7 1700 aa20.06■□□□□ 0.8
HDAC6-217ENST00000469223 E9PCH4 1651 aa20.06■□□□□ 0.8
HDAC6-217ENST00000469223 FNBP4Q8N3X1 1017 aaPredicted RBP20.05■□□□□ 0.8
HDAC6-217ENST00000469223 ANKRD30AQ9BXX3 1397 aa20.04■□□□□ 0.8
HDAC6-217ENST00000469223 GLI3P10071 1580 aa20.04■□□□□ 0.8
HDAC6-217ENST00000469223 DEFB132Q7Z7B7 95 aa20.03■□□□□ 0.8
HDAC6-217ENST00000469223 BCL9LQ86UU0 1499 aa20.03■□□□□ 0.8
HDAC6-217ENST00000469223 C1orf167Q5SNV9 1468 aa20.02■□□□□ 0.8
HDAC6-217ENST00000469223 MYOM2P54296 1465 aa20.01■□□□□ 0.79
HDAC6-217ENST00000469223 IQGAP3Q86VI3 1631 aa20.01■□□□□ 0.79
HDAC6-217ENST00000469223 KANK4Q5T7N3 995 aaPredicted RBP20■□□□□ 0.79
HDAC6-217ENST00000469223 CHIC2Q9UKJ5 165 aa20■□□□□ 0.79
HDAC6-217ENST00000469223 VPS8Q8N3P4 1428 aa19.97■□□□□ 0.79
HDAC6-217ENST00000469223 PSDA5PKW4 1024 aaPredicted RBP19.97■□□□□ 0.79
HDAC6-217ENST00000469223 SOS2Q07890 1332 aaPredicted RBP19.97■□□□□ 0.79
HDAC6-217ENST00000469223 RALGAPBQ86X10 1494 aa19.96■□□□□ 0.79
HDAC6-217ENST00000469223 ADGRL2O95490 1459 aa19.95■□□□□ 0.78
HDAC6-217ENST00000469223 GJD4Q96KN9 370 aaPredicted RBP19.94■□□□□ 0.78
HDAC6-217ENST00000469223 METP08581 1390 aa19.94■□□□□ 0.78
HDAC6-217ENST00000469223 SF3B2Q13435 895 aaKnown RBP19.93■□□□□ 0.78
HDAC6-217ENST00000469223 HRCP23327 699 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms