RNA–Protein interactions for RNA: ENST00000466861.1

SUMO3-205, Transcript of small ubiquitin-like modifier 3, humanhuman

TSL 2

Gene SUMO3, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3-205ENST00000466861 RIMS2Q9UQ26 1411 aa34.42■■■■□ 3.1
SUMO3-205ENST00000466861 CCDC144AA2RUR9 1427 aa34.39■■■■□ 3.1
SUMO3-205ENST00000466861 FOXD1Q16676 465 aa34.39■■■■□ 3.1
SUMO3-205ENST00000466861 PLEKHG1Q9ULL1 1385 aa34.34■■■■□ 3.09
SUMO3-205ENST00000466861 LTBP4Q8N2S1 1624 aa34.32■■■■□ 3.08
SUMO3-205ENST00000466861 PPP1R15AO75807 674 aaPredicted RBP34.3■■■■□ 3.08
SUMO3-205ENST00000466861 RPGRIP1LQ68CZ1 1315 aa34.3■■■■□ 3.08
SUMO3-205ENST00000466861 ZNF326Q5BKZ1 582 aaKnown RBP34.29■■■■□ 3.08
SUMO3-205ENST00000466861 ANKRD30BQ9BXX2 1392 aa34.28■■■■□ 3.08
SUMO3-205ENST00000466861 ZNF335Q9H4Z2 1342 aaPredicted RBP34.28■■■■□ 3.08
SUMO3-205ENST00000466861 NEXMIFQ5QGS0 1516 aa34.26■■■■□ 3.08
SUMO3-205ENST00000466861 CERKQ8TCT0 537 aa34.24■■■■□ 3.07
SUMO3-205ENST00000466861 CPS1P31327 1500 aa34.24■■■■□ 3.07
SUMO3-205ENST00000466861 SPATA31E1Q6ZUB1 1445 aa34.23■■■■□ 3.07
SUMO3-205ENST00000466861 IQSEC2Q5JU85 1478 aa34.22■■■■□ 3.07
SUMO3-205ENST00000466861 DIP2AQ14689 1571 aa34.21■■■■□ 3.07
SUMO3-205ENST00000466861 TBX22Q9Y458 520 aa34.19■■■■□ 3.06
SUMO3-205ENST00000466861 VGFO15240 615 aaPredicted RBP34.18■■■■□ 3.06
SUMO3-205ENST00000466861 PPLO60437 1756 aa34.17■■■■□ 3.06
SUMO3-205ENST00000466861 BCANQ96GW7 911 aa34.17■■■■□ 3.06
SUMO3-205ENST00000466861 SETBP1Q9Y6X0 1596 aa34.16■■■■□ 3.06
SUMO3-205ENST00000466861 SLC26A8Q96RN1 970 aa34.15■■■■□ 3.06
SUMO3-205ENST00000466861 ADAMTS13Q76LX8 1427 aa34.14■■■■□ 3.06
SUMO3-205ENST00000466861 NUTM2DQ5VT03 806 aaPredicted RBP34.14■■■■□ 3.06
SUMO3-205ENST00000466861 PIK3R4Q99570 1358 aa34.13■■■■□ 3.05
SUMO3-205ENST00000466861 STRCP1A6NGW2 1772 aa34.11■■■■□ 3.05
SUMO3-205ENST00000466861 IFT172Q9UG01 1749 aa34.1■■■■□ 3.05
SUMO3-205ENST00000466861 KCNA6P17658 529 aa34.1■■■■□ 3.05
SUMO3-205ENST00000466861 NRXN3Q9Y4C0 1643 aa34.09■■■■□ 3.05
SUMO3-205ENST00000466861 NWD1Q149M9 1564 aa34.07■■■■□ 3.05
SUMO3-205ENST00000466861 CHD2O14647 1828 aaKnown RBP34.07■■■■□ 3.04
SUMO3-205ENST00000466861 RGL3Q3MIN7 710 aa34.06■■■■□ 3.04
SUMO3-205ENST00000466861 NKTRP30414 1462 aaKnown RBP34.03■■■■□ 3.04
SUMO3-205ENST00000466861 STAC3Q96MF2 364 aa34.02■■■■□ 3.04
SUMO3-205ENST00000466861 LRRC7Q96NW7 1537 aa34.01■■■■□ 3.04
SUMO3-205ENST00000466861 FBXO41Q8TF61 875 aa34.01■■■■□ 3.03
SUMO3-205ENST00000466861 DHX57Q6P158 1386 aaKnown RBP34■■■■□ 3.03
SUMO3-205ENST00000466861 MYOM2P54296 1465 aa33.99■■■■□ 3.03
SUMO3-205ENST00000466861 ALKQ9UM73 1620 aa33.94■■■■□ 3.02
SUMO3-205ENST00000466861 SENP3Q9H4L4 574 aaPredicted RBP33.94■■■■□ 3.02
SUMO3-205ENST00000466861 ADGRF5Q8IZF2 1346 aa33.94■■■■□ 3.02
SUMO3-205ENST00000466861 NRXN1Q9ULB1 1477 aa33.94■■■■□ 3.02
SUMO3-205ENST00000466861 SETD1AO15047 1707 aaKnown RBP33.93■■■■□ 3.02
SUMO3-205ENST00000466861 PIK3C2GO75747 1445 aa33.91■■■■□ 3.02
SUMO3-205ENST00000466861 NCOA3Q9Y6Q9 1424 aa33.89■■■■□ 3.02
SUMO3-205ENST00000466861 METP08581 1390 aa33.89■■■■□ 3.02
SUMO3-205ENST00000466861 PTPRUQ92729 1446 aa33.88■■■■□ 3.01
SUMO3-205ENST00000466861 XIRP1Q702N8 1843 aaKnown RBP33.88■■■■□ 3.01
SUMO3-205ENST00000466861 XRN1Q8IZH2 1706 aaKnown RBP33.88■■■■□ 3.01
SUMO3-205ENST00000466861 PROSER2Q86WR7 435 aaPredicted RBP33.88■■■■□ 3.01
SUMO3-205ENST00000466861 PCGF6Q9BYE7 350 aa33.87■■■■□ 3.01
SUMO3-205ENST00000466861 AMOTL2Q9Y2J4 779 aa33.87■■■■□ 3.01
SUMO3-205ENST00000466861 PRAG1Q86YV5 1406 aa33.86■■■■□ 3.01
SUMO3-205ENST00000466861 LAMC1P11047 1609 aa33.85■■■■□ 3.01
SUMO3-205ENST00000466861 TMEM94Q12767 1356 aa33.85■■■■□ 3.01
SUMO3-205ENST00000466861 DCAF11Q8TEB1 546 aa33.82■■■■□ 3
SUMO3-205ENST00000466861 TOM1O60784 492 aa33.81■■■■□ 3
SUMO3-205ENST00000466861 C14orf93Q9H972 538 aaKnown RBP33.81■■■■□ 3
SUMO3-205ENST00000466861 ILDR1Q86SU0 546 aaPredicted RBP33.79■■■■□ 3
SUMO3-205ENST00000466861 UBAP1LF5GYI3 381 aa33.77■■■■□ 3
SUMO3-205ENST00000466861 PTCH1Q13635 1447 aa33.76■■■□□ 2.99
SUMO3-205ENST00000466861 KDM2AQ9Y2K7 1162 aa33.73■■■□□ 2.99
SUMO3-205ENST00000466861 MSH6P52701 1360 aa33.72■■■□□ 2.99
SUMO3-205ENST00000466861 SIN3AQ96ST3 1273 aa33.72■■■□□ 2.99
SUMO3-205ENST00000466861 LRPPRCP42704 1394 aaKnown RBP33.72■■■□□ 2.99
SUMO3-205ENST00000466861 TECPR2O15040 1411 aa33.7■■■□□ 2.99
SUMO3-205ENST00000466861 ASXL1Q8IXJ9 1541 aa33.7■■■□□ 2.99
SUMO3-205ENST00000466861 ABCC11Q96J66 1382 aa33.7■■■□□ 2.98
SUMO3-205ENST00000466861 CFAP70Q5T0N1 1121 aa33.69■■■□□ 2.98
SUMO3-205ENST00000466861 KNDC1Q76NI1 1749 aa33.69■■■□□ 2.98
SUMO3-205ENST00000466861 C19orf44Q9H6X5 657 aa33.67■■■□□ 2.98
SUMO3-205ENST00000466861 KIAA1210Q9ULL0 1709 aa33.65■■■□□ 2.98
SUMO3-205ENST00000466861 YTHDC2Q9H6S0 1430 aaKnown RBP33.65■■■□□ 2.98
SUMO3-205ENST00000466861 CLSPNQ9HAW4 1339 aa33.65■■■□□ 2.98
SUMO3-205ENST00000466861 NEUROD1Q13562 356 aa33.65■■■□□ 2.98
SUMO3-205ENST00000466861 SIRT1Q96EB6 747 aa33.65■■■□□ 2.98
SUMO3-205ENST00000466861 DCCP43146 1447 aa33.64■■■□□ 2.98
SUMO3-205ENST00000466861 L3MBTL2Q969R5 705 aa33.64■■■□□ 2.98
SUMO3-205ENST00000466861 RBM33Q96EV2 1170 aaKnown RBP33.64■■■□□ 2.98
SUMO3-205ENST00000466861 ROBO2Q9HCK4 1378 aa33.63■■■□□ 2.97
SUMO3-205ENST00000466861 TMEM132EQ6IEE7 984 aa33.62■■■□□ 2.97
SUMO3-205ENST00000466861 C14orf37Q86TY3 774 aa33.62■■■□□ 2.97
SUMO3-205ENST00000466861 ADGRB1O14514 1584 aa33.61■■■□□ 2.97
SUMO3-205ENST00000466861 SIPA1L2Q9P2F8 1722 aaPredicted RBP33.61■■■□□ 2.97
SUMO3-205ENST00000466861 CADPS2Q86UW7 1296 aa33.6■■■□□ 2.97
SUMO3-205ENST00000466861 ADGRL3Q9HAR2 1447 aa33.6■■■□□ 2.97
SUMO3-205ENST00000466861 FAM135BQ49AJ0 1406 aa33.59■■■□□ 2.97
SUMO3-205ENST00000466861 DLC1Q96QB1 1528 aa33.56■■■□□ 2.96
SUMO3-205ENST00000466861 ATF3P18847 181 aa33.55■■■□□ 2.96
SUMO3-205ENST00000466861 STK26Q9P289 416 aa33.55■■■□□ 2.96
SUMO3-205ENST00000466861 NALCNQ8IZF0 1738 aa33.53■■■□□ 2.96
SUMO3-205ENST00000466861 TONSLQ96HA7 1378 aa33.52■■■□□ 2.96
SUMO3-205ENST00000466861 PIP4K2BP78356 416 aa33.52■■■□□ 2.96
SUMO3-205ENST00000466861 SLAIN2Q9P270 581 aa33.51■■■□□ 2.95
SUMO3-205ENST00000466861 SCAF1Q9H7N4 1312 aaKnown RBP33.48■■■□□ 2.95
SUMO3-205ENST00000466861 CDC42BPGQ6DT37 1551 aa33.44■■■□□ 2.94
SUMO3-205ENST00000466861 WAPLQ7Z5K2 1190 aa33.44■■■□□ 2.94
SUMO3-205ENST00000466861 TIMELESSQ9UNS1 1208 aa33.44■■■□□ 2.94
SUMO3-205ENST00000466861 TRPM1Q7Z4N2 1603 aa33.42■■■□□ 2.94
SUMO3-205ENST00000466861 ROBO1Q9Y6N7 1651 aa33.41■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms