RNA–Protein interactions for RNA: ENST00000466601.5

DNMT3A-208, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 2

Gene DNMT3A, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-208ENST00000466601 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.13■□□□□ 0.97
DNMT3A-208ENST00000466601 ZFYVE9O95405 1425 aa21.12■□□□□ 0.97
DNMT3A-208ENST00000466601 POLR1AO95602 1720 aaPredicted RBP21.12■□□□□ 0.97
DNMT3A-208ENST00000466601 NEURL4Q96JN8 1562 aa21.11■□□□□ 0.97
DNMT3A-208ENST00000466601 MED14O60244 1454 aa21.11■□□□□ 0.97
DNMT3A-208ENST00000466601 NPHP4O75161 1426 aaPredicted RBP21.11■□□□□ 0.97
DNMT3A-208ENST00000466601 PPP1R15AO75807 674 aaPredicted RBP21.1■□□□□ 0.97
DNMT3A-208ENST00000466601 RGL3Q3MIN7 710 aa21.1■□□□□ 0.97
DNMT3A-208ENST00000466601 NUTM2DQ5VT03 806 aaPredicted RBP21.1■□□□□ 0.97
DNMT3A-208ENST00000466601 SPATA31E1Q6ZUB1 1445 aa21.1■□□□□ 0.97
DNMT3A-208ENST00000466601 RPGRIP1LQ68CZ1 1315 aa21.09■□□□□ 0.97
DNMT3A-208ENST00000466601 NEXMIFQ5QGS0 1516 aa21.05■□□□□ 0.96
DNMT3A-208ENST00000466601 BCANQ96GW7 911 aa21.05■□□□□ 0.96
DNMT3A-208ENST00000466601 PLEKHG1Q9ULL1 1385 aa21.05■□□□□ 0.96
DNMT3A-208ENST00000466601 IQGAP1P46940 1657 aa21.04■□□□□ 0.96
DNMT3A-208ENST00000466601 VGFO15240 615 aaPredicted RBP21.03■□□□□ 0.96
DNMT3A-208ENST00000466601 SIN3AQ96ST3 1273 aa21.03■□□□□ 0.96
DNMT3A-208ENST00000466601 SENP3Q9H4L4 574 aaPredicted RBP21.03■□□□□ 0.96
DNMT3A-208ENST00000466601 NEUROD1Q13562 356 aa21■□□□□ 0.95
DNMT3A-208ENST00000466601 SLC26A8Q96RN1 970 aa21■□□□□ 0.95
DNMT3A-208ENST00000466601 PPLO60437 1756 aa20.99■□□□□ 0.95
DNMT3A-208ENST00000466601 TBX22Q9Y458 520 aa20.96■□□□□ 0.95
DNMT3A-208ENST00000466601 ADGRF5Q8IZF2 1346 aa20.96■□□□□ 0.95
DNMT3A-208ENST00000466601 DCAF11Q8TEB1 546 aa20.95■□□□□ 0.94
DNMT3A-208ENST00000466601 ZNF335Q9H4Z2 1342 aaPredicted RBP20.95■□□□□ 0.94
DNMT3A-208ENST00000466601 IFT172Q9UG01 1749 aa20.95■□□□□ 0.94
DNMT3A-208ENST00000466601 ADAMTS13Q76LX8 1427 aa20.95■□□□□ 0.94
DNMT3A-208ENST00000466601 SETBP1Q9Y6X0 1596 aa20.93■□□□□ 0.94
DNMT3A-208ENST00000466601 STAC3Q96MF2 364 aa20.93■□□□□ 0.94
DNMT3A-208ENST00000466601 KDM2AQ9Y2K7 1162 aa20.93■□□□□ 0.94
DNMT3A-208ENST00000466601 CCER1Q8TC90 406 aaPredicted RBP20.92■□□□□ 0.94
DNMT3A-208ENST00000466601 MYOM2P54296 1465 aa20.92■□□□□ 0.94
DNMT3A-208ENST00000466601 ILDR1Q86SU0 546 aaPredicted RBP20.91■□□□□ 0.94
DNMT3A-208ENST00000466601 NRXN3Q9Y4C0 1643 aa20.91■□□□□ 0.94
DNMT3A-208ENST00000466601 DIP2AQ14689 1571 aa20.9■□□□□ 0.94
DNMT3A-208ENST00000466601 CLSPNQ9HAW4 1339 aa20.9■□□□□ 0.94
DNMT3A-208ENST00000466601 L3MBTL2Q969R5 705 aa20.89■□□□□ 0.93
DNMT3A-208ENST00000466601 KCNA6P17658 529 aa20.88■□□□□ 0.93
DNMT3A-208ENST00000466601 NRXN1Q9ULB1 1477 aa20.88■□□□□ 0.93
DNMT3A-208ENST00000466601 PIK3C2GO75747 1445 aa20.87■□□□□ 0.93
DNMT3A-208ENST00000466601 LTBP4Q8N2S1 1624 aa20.87■□□□□ 0.93
DNMT3A-208ENST00000466601 PIK3R4Q99570 1358 aa20.86■□□□□ 0.93
DNMT3A-208ENST00000466601 ALKQ9UM73 1620 aa20.86■□□□□ 0.93
DNMT3A-208ENST00000466601 METP08581 1390 aa20.85■□□□□ 0.93
DNMT3A-208ENST00000466601 C14orf93Q9H972 538 aaKnown RBP20.84■□□□□ 0.93
DNMT3A-208ENST00000466601 TONSLQ96HA7 1378 aa20.84■□□□□ 0.93
DNMT3A-208ENST00000466601 CFAP70Q5T0N1 1121 aa20.83■□□□□ 0.93
DNMT3A-208ENST00000466601 CPS1P31327 1500 aa20.83■□□□□ 0.92
DNMT3A-208ENST00000466601 STRCP1A6NGW2 1772 aa20.82■□□□□ 0.92
DNMT3A-208ENST00000466601 AMOTL2Q9Y2J4 779 aa20.82■□□□□ 0.92
DNMT3A-208ENST00000466601 CHD2O14647 1828 aaKnown RBP20.81■□□□□ 0.92
DNMT3A-208ENST00000466601 PTPRUQ92729 1446 aa20.81■□□□□ 0.92
DNMT3A-208ENST00000466601 CERKQ8TCT0 537 aa20.81■□□□□ 0.92
DNMT3A-208ENST00000466601 SETD1AO15047 1707 aaKnown RBP20.81■□□□□ 0.92
DNMT3A-208ENST00000466601 NWD1Q149M9 1564 aa20.8■□□□□ 0.92
DNMT3A-208ENST00000466601 TMEM132EQ6IEE7 984 aa20.78■□□□□ 0.92
DNMT3A-208ENST00000466601 PRAG1Q86YV5 1406 aa20.78■□□□□ 0.92
DNMT3A-208ENST00000466601 PROSER2Q86WR7 435 aaPredicted RBP20.77■□□□□ 0.92
DNMT3A-208ENST00000466601 NKTRP30414 1462 aaKnown RBP20.76■□□□□ 0.91
DNMT3A-208ENST00000466601 LAMC1P11047 1609 aa20.76■□□□□ 0.91
DNMT3A-208ENST00000466601 LRRC7Q96NW7 1537 aa20.76■□□□□ 0.91
DNMT3A-208ENST00000466601 ASXL1Q8IXJ9 1541 aa20.74■□□□□ 0.91
DNMT3A-208ENST00000466601 TIMELESSQ9UNS1 1208 aa20.74■□□□□ 0.91
DNMT3A-208ENST00000466601 LRPPRCP42704 1394 aaKnown RBP20.73■□□□□ 0.91
DNMT3A-208ENST00000466601 XRN1Q8IZH2 1706 aaKnown RBP20.73■□□□□ 0.91
DNMT3A-208ENST00000466601 RBM33Q96EV2 1170 aaKnown RBP20.73■□□□□ 0.91
DNMT3A-208ENST00000466601 STK26Q9P289 416 aa20.73■□□□□ 0.91
DNMT3A-208ENST00000466601 TMEM94Q12767 1356 aa20.72■□□□□ 0.91
DNMT3A-208ENST00000466601 YTHDC2Q9H6S0 1430 aaKnown RBP20.71■□□□□ 0.91
DNMT3A-208ENST00000466601 IQSEC2Q5JU85 1478 aa20.71■□□□□ 0.91
DNMT3A-208ENST00000466601 NBPF8Q3BBV2 869 aa20.71■□□□□ 0.91
DNMT3A-208ENST00000466601 ABCC11Q96J66 1382 aa20.71■□□□□ 0.91
DNMT3A-208ENST00000466601 ADGRB1O14514 1584 aa20.7■□□□□ 0.9
DNMT3A-208ENST00000466601 NBPF1Q3BBV0 1214 aa20.69■□□□□ 0.9
DNMT3A-208ENST00000466601 KIAA1210Q9ULL0 1709 aa20.69■□□□□ 0.9
DNMT3A-208ENST00000466601 ROBO2Q9HCK4 1378 aa20.68■□□□□ 0.9
DNMT3A-208ENST00000466601 TECPR2O15040 1411 aa20.68■□□□□ 0.9
DNMT3A-208ENST00000466601 PTCH1Q13635 1447 aa20.68■□□□□ 0.9
DNMT3A-208ENST00000466601 NCOA3Q9Y6Q9 1424 aa20.67■□□□□ 0.9
DNMT3A-208ENST00000466601 C14orf37Q86TY3 774 aa20.66■□□□□ 0.9
DNMT3A-208ENST00000466601 XIRP1Q702N8 1843 aaKnown RBP20.65■□□□□ 0.9
DNMT3A-208ENST00000466601 SIRT1Q96EB6 747 aa20.65■□□□□ 0.9
DNMT3A-208ENST00000466601 TRAK1Q9UPV9 953 aa20.65■□□□□ 0.9
DNMT3A-208ENST00000466601 KNDC1Q76NI1 1749 aa20.64■□□□□ 0.89
DNMT3A-208ENST00000466601 TRPM1Q7Z4N2 1603 aa20.64■□□□□ 0.89
DNMT3A-208ENST00000466601 WAPLQ7Z5K2 1190 aa20.63■□□□□ 0.89
DNMT3A-208ENST00000466601 ROCK2O75116 1388 aaKnown RBP20.62■□□□□ 0.89
DNMT3A-208ENST00000466601 MSH6P52701 1360 aa20.62■□□□□ 0.89
DNMT3A-208ENST00000466601 FAM135BQ49AJ0 1406 aa20.61■□□□□ 0.89
DNMT3A-208ENST00000466601 C19orf44Q9H6X5 657 aa20.61■□□□□ 0.89
DNMT3A-208ENST00000466601 DLC1Q96QB1 1528 aa20.61■□□□□ 0.89
DNMT3A-208ENST00000466601 PLEKHH1Q9ULM0 1364 aa20.6■□□□□ 0.89
DNMT3A-208ENST00000466601 UBAP1LF5GYI3 381 aa20.6■□□□□ 0.89
DNMT3A-208ENST00000466601 TOM1O60784 492 aa20.6■□□□□ 0.89
DNMT3A-208ENST00000466601 PRAM1Q96QH2 718 aa20.6■□□□□ 0.89
DNMT3A-208ENST00000466601 RALGAPBQ86X10 1494 aa20.59■□□□□ 0.89
DNMT3A-208ENST00000466601 POGKQ9P215 609 aa20.59■□□□□ 0.89
DNMT3A-208ENST00000466601 ADGRL3Q9HAR2 1447 aa20.58■□□□□ 0.88
DNMT3A-208ENST00000466601 GPRASP1Q5JY77 1395 aa20.58■□□□□ 0.88
DNMT3A-208ENST00000466601 ATF3P18847 181 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms