RNA–Protein interactions for RNA: ENST00000466489.1

PMF1-204, Transcript of polyamine modulated factor 1, humanhuman

TSL 1 (best)

Gene PMF1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-204ENST00000466489 PPP1R15AO75807 674 aaPredicted RBP14.42□□□□□ -0.1
PMF1-204ENST00000466489 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.42□□□□□ -0.1
PMF1-204ENST00000466489 ARHGAP23Q9P227 1491 aa14.42□□□□□ -0.1
PMF1-204ENST00000466489 TXNDC2Q86VQ3 553 aa14.41□□□□□ -0.1
PMF1-204ENST00000466489 IQGAP1P46940 1657 aa14.41□□□□□ -0.1
PMF1-204ENST00000466489 RIMS2Q9UQ26 1411 aa14.4□□□□□ -0.1
PMF1-204ENST00000466489 NEURL4Q96JN8 1562 aa14.39□□□□□ -0.11
PMF1-204ENST00000466489 ANKRD30BQ9BXX2 1392 aa14.39□□□□□ -0.11
PMF1-204ENST00000466489 NCKAP5LQ9HCH0 1330 aa14.39□□□□□ -0.11
PMF1-204ENST00000466489 NPHP4O75161 1426 aaPredicted RBP14.38□□□□□ -0.11
PMF1-204ENST00000466489 RPGRIP1LQ68CZ1 1315 aa14.38□□□□□ -0.11
PMF1-204ENST00000466489 MED14O60244 1454 aa14.38□□□□□ -0.11
PMF1-204ENST00000466489 BCANQ96GW7 911 aa14.37□□□□□ -0.11
PMF1-204ENST00000466489 ZFYVE9O95405 1425 aa14.36□□□□□ -0.11
PMF1-204ENST00000466489 PPLO60437 1756 aa14.36□□□□□ -0.11
PMF1-204ENST00000466489 DHX57Q6P158 1386 aaKnown RBP14.35□□□□□ -0.11
PMF1-204ENST00000466489 DIEXFQ68CQ4 756 aaKnown RBP14.35□□□□□ -0.11
PMF1-204ENST00000466489 VGFO15240 615 aaPredicted RBP14.34□□□□□ -0.11
PMF1-204ENST00000466489 NEXMIFQ5QGS0 1516 aa14.34□□□□□ -0.11
PMF1-204ENST00000466489 PLEKHG1Q9ULL1 1385 aa14.34□□□□□ -0.11
PMF1-204ENST00000466489 SPATA31E1Q6ZUB1 1445 aa14.33□□□□□ -0.11
PMF1-204ENST00000466489 LTKP29376 864 aa14.33□□□□□ -0.12
PMF1-204ENST00000466489 RGL3Q3MIN7 710 aa14.33□□□□□ -0.12
PMF1-204ENST00000466489 IFT172Q9UG01 1749 aa14.32□□□□□ -0.12
PMF1-204ENST00000466489 DIP2AQ14689 1571 aa14.32□□□□□ -0.12
PMF1-204ENST00000466489 ZNF316A6NFI3 1004 aaPredicted RBP14.32□□□□□ -0.12
PMF1-204ENST00000466489 FBXO41Q8TF61 875 aa14.32□□□□□ -0.12
PMF1-204ENST00000466489 STAC3Q96MF2 364 aa14.3□□□□□ -0.12
PMF1-204ENST00000466489 NUTM2DQ5VT03 806 aaPredicted RBP14.29□□□□□ -0.12
PMF1-204ENST00000466489 SETBP1Q9Y6X0 1596 aa14.29□□□□□ -0.12
PMF1-204ENST00000466489 MYOM2P54296 1465 aa14.27□□□□□ -0.12
PMF1-204ENST00000466489 MYT1Q01538 1121 aa14.26□□□□□ -0.13
PMF1-204ENST00000466489 LAMC1P11047 1609 aa14.26□□□□□ -0.13
PMF1-204ENST00000466489 NEUROD1Q13562 356 aa14.25□□□□□ -0.13
PMF1-204ENST00000466489 SLC26A8Q96RN1 970 aa14.25□□□□□ -0.13
PMF1-204ENST00000466489 CPS1P31327 1500 aa14.25□□□□□ -0.13
PMF1-204ENST00000466489 PIK3R4Q99570 1358 aa14.24□□□□□ -0.13
PMF1-204ENST00000466489 DCAF11Q8TEB1 546 aa14.24□□□□□ -0.13
PMF1-204ENST00000466489 TBX22Q9Y458 520 aa14.24□□□□□ -0.13
PMF1-204ENST00000466489 TONSLQ96HA7 1378 aa14.23□□□□□ -0.13
PMF1-204ENST00000466489 NRXN3Q9Y4C0 1643 aa14.23□□□□□ -0.13
PMF1-204ENST00000466489 CHD2O14647 1828 aaKnown RBP14.23□□□□□ -0.13
PMF1-204ENST00000466489 SENP3Q9H4L4 574 aaPredicted RBP14.23□□□□□ -0.13
PMF1-204ENST00000466489 SIN3AQ96ST3 1273 aa14.22□□□□□ -0.13
PMF1-204ENST00000466489 ADAMTS13Q76LX8 1427 aa14.22□□□□□ -0.13
PMF1-204ENST00000466489 ZNF335Q9H4Z2 1342 aaPredicted RBP14.21□□□□□ -0.13
PMF1-204ENST00000466489 KDM2AQ9Y2K7 1162 aa14.21□□□□□ -0.13
PMF1-204ENST00000466489 ALKQ9UM73 1620 aa14.21□□□□□ -0.13
PMF1-204ENST00000466489 PIK3C2GO75747 1445 aa14.21□□□□□ -0.13
PMF1-204ENST00000466489 ADGRF5Q8IZF2 1346 aa14.2□□□□□ -0.14
PMF1-204ENST00000466489 NKTRP30414 1462 aaKnown RBP14.2□□□□□ -0.14
PMF1-204ENST00000466489 NWD1Q149M9 1564 aa14.2□□□□□ -0.14
PMF1-204ENST00000466489 NRXN1Q9ULB1 1477 aa14.19□□□□□ -0.14
PMF1-204ENST00000466489 KCNA6P17658 529 aa14.19□□□□□ -0.14
PMF1-204ENST00000466489 LTBP4Q8N2S1 1624 aa14.19□□□□□ -0.14
PMF1-204ENST00000466489 SETD1AO15047 1707 aaKnown RBP14.18□□□□□ -0.14
PMF1-204ENST00000466489 STRCP1A6NGW2 1772 aa14.17□□□□□ -0.14
PMF1-204ENST00000466489 KIAA1210Q9ULL0 1709 aa14.17□□□□□ -0.14
PMF1-204ENST00000466489 IQSEC2Q5JU85 1478 aa14.17□□□□□ -0.14
PMF1-204ENST00000466489 L3MBTL2Q969R5 705 aa14.16□□□□□ -0.14
PMF1-204ENST00000466489 XRN1Q8IZH2 1706 aaKnown RBP14.15□□□□□ -0.14
PMF1-204ENST00000466489 CERKQ8TCT0 537 aa14.15□□□□□ -0.14
PMF1-204ENST00000466489 C14orf93Q9H972 538 aaKnown RBP14.15□□□□□ -0.14
PMF1-204ENST00000466489 TIMELESSQ9UNS1 1208 aa14.15□□□□□ -0.14
PMF1-204ENST00000466489 METP08581 1390 aa14.14□□□□□ -0.15
PMF1-204ENST00000466489 PROSER2Q86WR7 435 aaPredicted RBP14.14□□□□□ -0.15
PMF1-204ENST00000466489 AMOTL2Q9Y2J4 779 aa14.14□□□□□ -0.15
PMF1-204ENST00000466489 PRAG1Q86YV5 1406 aa14.14□□□□□ -0.15
PMF1-204ENST00000466489 KNDC1Q76NI1 1749 aa14.13□□□□□ -0.15
PMF1-204ENST00000466489 LRRC7Q96NW7 1537 aa14.12□□□□□ -0.15
PMF1-204ENST00000466489 CFAP70Q5T0N1 1121 aa14.12□□□□□ -0.15
PMF1-204ENST00000466489 C14orf37Q86TY3 774 aa14.12□□□□□ -0.15
PMF1-204ENST00000466489 PTCH1Q13635 1447 aa14.11□□□□□ -0.15
PMF1-204ENST00000466489 LRPPRCP42704 1394 aaKnown RBP14.1□□□□□ -0.15
PMF1-204ENST00000466489 YTHDC2Q9H6S0 1430 aaKnown RBP14.1□□□□□ -0.15
PMF1-204ENST00000466489 NCOA3Q9Y6Q9 1424 aa14.1□□□□□ -0.15
PMF1-204ENST00000466489 MSH6P52701 1360 aa14.09□□□□□ -0.15
PMF1-204ENST00000466489 TMEM94Q12767 1356 aa14.09□□□□□ -0.15
PMF1-204ENST00000466489 PTPRUQ92729 1446 aa14.09□□□□□ -0.15
PMF1-204ENST00000466489 TRPM1Q7Z4N2 1603 aa14.09□□□□□ -0.15
PMF1-204ENST00000466489 XIRP1Q702N8 1843 aaKnown RBP14.09□□□□□ -0.15
PMF1-204ENST00000466489 TMEM132EQ6IEE7 984 aa14.09□□□□□ -0.15
PMF1-204ENST00000466489 STK26Q9P289 416 aa14.09□□□□□ -0.15
PMF1-204ENST00000466489 ASXL1Q8IXJ9 1541 aa14.09□□□□□ -0.15
PMF1-204ENST00000466489 ABCC11Q96J66 1382 aa14.09□□□□□ -0.15
PMF1-204ENST00000466489 TECPR2O15040 1411 aa14.08□□□□□ -0.15
PMF1-204ENST00000466489 ADGRB1O14514 1584 aa14.07□□□□□ -0.16
PMF1-204ENST00000466489 SCAF1Q9H7N4 1312 aaKnown RBP14.07□□□□□ -0.16
PMF1-204ENST00000466489 ROCK2O75116 1388 aaKnown RBP14.07□□□□□ -0.16
PMF1-204ENST00000466489 DLC1Q96QB1 1528 aa14.06□□□□□ -0.16
PMF1-204ENST00000466489 TOM1O60784 492 aa14.06□□□□□ -0.16
PMF1-204ENST00000466489 POGKQ9P215 609 aa14.05□□□□□ -0.16
PMF1-204ENST00000466489 FAM135BQ49AJ0 1406 aa14.05□□□□□ -0.16
PMF1-204ENST00000466489 ATF3P18847 181 aa14.04□□□□□ -0.16
PMF1-204ENST00000466489 SIRT1Q96EB6 747 aa14.04□□□□□ -0.16
PMF1-204ENST00000466489 C19orf44Q9H6X5 657 aa14.04□□□□□ -0.16
PMF1-204ENST00000466489 EIF3AQ14152 1382 aaKnown RBP14.04□□□□□ -0.16
PMF1-204ENST00000466489 ROBO2Q9HCK4 1378 aa14.04□□□□□ -0.16
PMF1-204ENST00000466489 ADGRL3Q9HAR2 1447 aa14.04□□□□□ -0.16
PMF1-204ENST00000466489 RALGAPBQ86X10 1494 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms