RNA–Protein interactions for RNA: ENST00000465903.5

SMC4-206, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-206ENST00000465903 KIF1BO60333 1816 aa38.53■■■■□ 3.76
SMC4-206ENST00000465903 HRCP23327 699 aa38.51■■■■□ 3.76
SMC4-206ENST00000465903 STRCP1A6NGW2 1772 aa38.45■■■■□ 3.75
SMC4-206ENST00000465903 HDGFP51858 240 aaKnown RBP38.45■■■■□ 3.75
SMC4-206ENST00000465903 NUTM2DQ5VT03 806 aaPredicted RBP38.42■■■■□ 3.74
SMC4-206ENST00000465903 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.42■■■■□ 3.74
SMC4-206ENST00000465903 PLEKHG1Q9ULL1 1385 aa38.41■■■■□ 3.74
SMC4-206ENST00000465903 ILDR1Q86SU0 546 aaPredicted RBP38.4■■■■□ 3.74
SMC4-206ENST00000465903 PPP1R15AO75807 674 aaPredicted RBP38.37■■■■□ 3.73
SMC4-206ENST00000465903 ZNF326Q5BKZ1 582 aaKnown RBP38.37■■■■□ 3.73
SMC4-206ENST00000465903 FBXO41Q8TF61 875 aa38.37■■■■□ 3.73
SMC4-206ENST00000465903 SLC26A8Q96RN1 970 aa38.37■■■■□ 3.73
SMC4-206ENST00000465903 SENP3Q9H4L4 574 aaPredicted RBP38.36■■■■□ 3.73
SMC4-206ENST00000465903 CPS1P31327 1500 aa38.36■■■■□ 3.73
SMC4-206ENST00000465903 IQSEC2Q5JU85 1478 aa38.34■■■■□ 3.73
SMC4-206ENST00000465903 NEXMIFQ5QGS0 1516 aa38.33■■■■□ 3.73
SMC4-206ENST00000465903 CCDC144AA2RUR9 1427 aa38.31■■■■□ 3.72
SMC4-206ENST00000465903 BCANQ96GW7 911 aa38.31■■■■□ 3.72
SMC4-206ENST00000465903 ADAMTS13Q76LX8 1427 aa38.27■■■■□ 3.72
SMC4-206ENST00000465903 TBX22Q9Y458 520 aa38.24■■■■□ 3.71
SMC4-206ENST00000465903 CHD2O14647 1828 aaKnown RBP38.23■■■■□ 3.71
SMC4-206ENST00000465903 PPLO60437 1756 aa38.23■■■■□ 3.71
SMC4-206ENST00000465903 NRXN3Q9Y4C0 1643 aa38.23■■■■□ 3.71
SMC4-206ENST00000465903 SPATA31E1Q6ZUB1 1445 aa38.22■■■■□ 3.71
SMC4-206ENST00000465903 KCNA6P17658 529 aa38.21■■■■□ 3.71
SMC4-206ENST00000465903 LRRC7Q96NW7 1537 aa38.21■■■■□ 3.71
SMC4-206ENST00000465903 ANKRD30BQ9BXX2 1392 aa38.2■■■■□ 3.71
SMC4-206ENST00000465903 RPGRIP1LQ68CZ1 1315 aa38.2■■■■□ 3.71
SMC4-206ENST00000465903 TRIM26Q12899 539 aaPredicted RBP38.2■■■■□ 3.71
SMC4-206ENST00000465903 DIP2AQ14689 1571 aa38.19■■■■□ 3.7
SMC4-206ENST00000465903 SETBP1Q9Y6X0 1596 aa38.19■■■■□ 3.7
SMC4-206ENST00000465903 XIRP1Q702N8 1843 aaKnown RBP38.17■■■■□ 3.7
SMC4-206ENST00000465903 NWD1Q149M9 1564 aa38.17■■■■□ 3.7
SMC4-206ENST00000465903 RGL3Q3MIN7 710 aa38.15■■■■□ 3.7
SMC4-206ENST00000465903 IFT172Q9UG01 1749 aa38.13■■■■□ 3.69
SMC4-206ENST00000465903 VGFO15240 615 aaPredicted RBP38.12■■■■□ 3.69
SMC4-206ENST00000465903 PIK3R4Q99570 1358 aa38.08■■■■□ 3.69
SMC4-206ENST00000465903 PTPRUQ92729 1446 aa38.05■■■■□ 3.68
SMC4-206ENST00000465903 NKTRP30414 1462 aaKnown RBP38.05■■■■□ 3.68
SMC4-206ENST00000465903 UBAP1LF5GYI3 381 aa38.04■■■■□ 3.68
SMC4-206ENST00000465903 SETD1AO15047 1707 aaKnown RBP38.04■■■■□ 3.68
SMC4-206ENST00000465903 PROSER2Q86WR7 435 aaPredicted RBP38.02■■■■□ 3.68
SMC4-206ENST00000465903 ADGRF5Q8IZF2 1346 aa38.02■■■■□ 3.68
SMC4-206ENST00000465903 METP08581 1390 aa38.01■■■■□ 3.68
SMC4-206ENST00000465903 TMEM94Q12767 1356 aa38■■■■□ 3.67
SMC4-206ENST00000465903 ALKQ9UM73 1620 aa37.99■■■■□ 3.67
SMC4-206ENST00000465903 RBM33Q96EV2 1170 aaKnown RBP37.98■■■■□ 3.67
SMC4-206ENST00000465903 AMOTL2Q9Y2J4 779 aa37.97■■■■□ 3.67
SMC4-206ENST00000465903 XRN1Q8IZH2 1706 aaKnown RBP37.95■■■■□ 3.67
SMC4-206ENST00000465903 TOM1O60784 492 aa37.93■■■■□ 3.66
SMC4-206ENST00000465903 PIK3C2GO75747 1445 aa37.87■■■■□ 3.65
SMC4-206ENST00000465903 MYOM2P54296 1465 aa37.86■■■■□ 3.65
SMC4-206ENST00000465903 NRXN1Q9ULB1 1477 aa37.85■■■■□ 3.65
SMC4-206ENST00000465903 NCOA3Q9Y6Q9 1424 aa37.83■■■■□ 3.65
SMC4-206ENST00000465903 DHX57Q6P158 1386 aaKnown RBP37.82■■■■□ 3.65
SMC4-206ENST00000465903 PIP4K2BP78356 416 aa37.81■■■■□ 3.64
SMC4-206ENST00000465903 DCAF11Q8TEB1 546 aa37.77■■■■□ 3.64
SMC4-206ENST00000465903 C14orf93Q9H972 538 aaKnown RBP37.76■■■■□ 3.64
SMC4-206ENST00000465903 MSH6P52701 1360 aa37.76■■■■□ 3.64
SMC4-206ENST00000465903 ASXL1Q8IXJ9 1541 aa37.76■■■■□ 3.63
SMC4-206ENST00000465903 SCAF1Q9H7N4 1312 aaKnown RBP37.75■■■■□ 3.63
SMC4-206ENST00000465903 SIPA1L2Q9P2F8 1722 aaPredicted RBP37.75■■■■□ 3.63
SMC4-206ENST00000465903 KDM2AQ9Y2K7 1162 aa37.74■■■■□ 3.63
SMC4-206ENST00000465903 PRAG1Q86YV5 1406 aa37.72■■■■□ 3.63
SMC4-206ENST00000465903 SIN3AQ96ST3 1273 aa37.72■■■■□ 3.63
SMC4-206ENST00000465903 CFAP70Q5T0N1 1121 aa37.71■■■■□ 3.63
SMC4-206ENST00000465903 TMEM132EQ6IEE7 984 aa37.71■■■■□ 3.63
SMC4-206ENST00000465903 STAC3Q96MF2 364 aa37.7■■■■□ 3.63
SMC4-206ENST00000465903 PTCH1Q13635 1447 aa37.7■■■■□ 3.62
SMC4-206ENST00000465903 ROBO2Q9HCK4 1378 aa37.69■■■■□ 3.62
SMC4-206ENST00000465903 LAMC1P11047 1609 aa37.69■■■■□ 3.62
SMC4-206ENST00000465903 C14orf37Q86TY3 774 aa37.69■■■■□ 3.62
SMC4-206ENST00000465903 C19orf44Q9H6X5 657 aa37.69■■■■□ 3.62
SMC4-206ENST00000465903 LRPPRCP42704 1394 aaKnown RBP37.66■■■■□ 3.62
SMC4-206ENST00000465903 KNDC1Q76NI1 1749 aa37.64■■■■□ 3.62
SMC4-206ENST00000465903 NALCNQ8IZF0 1738 aa37.64■■■■□ 3.62
SMC4-206ENST00000465903 STK26Q9P289 416 aa37.63■■■■□ 3.61
SMC4-206ENST00000465903 ABCC11Q96J66 1382 aa37.62■■■■□ 3.61
SMC4-206ENST00000465903 TECPR2O15040 1411 aa37.61■■■■□ 3.61
SMC4-206ENST00000465903 YTHDC2Q9H6S0 1430 aaKnown RBP37.61■■■■□ 3.61
SMC4-206ENST00000465903 HSPA1LP34931 641 aa37.61■■■■□ 3.61
SMC4-206ENST00000465903 FAM135BQ49AJ0 1406 aa37.61■■■■□ 3.61
SMC4-206ENST00000465903 PCGF6Q9BYE7 350 aa37.6■■■■□ 3.61
SMC4-206ENST00000465903 SLAIN2Q9P270 581 aa37.6■■■■□ 3.61
SMC4-206ENST00000465903 ADGRL3Q9HAR2 1447 aa37.6■■■■□ 3.61
SMC4-206ENST00000465903 CADPS2Q86UW7 1296 aa37.58■■■■□ 3.61
SMC4-206ENST00000465903 ROBO1Q9Y6N7 1651 aa37.57■■■■□ 3.61
SMC4-206ENST00000465903 ATF3P18847 181 aa37.57■■■■□ 3.6
SMC4-206ENST00000465903 NEUROD1Q13562 356 aa37.57■■■■□ 3.6
SMC4-206ENST00000465903 ADGRB1O14514 1584 aa37.56■■■■□ 3.6
SMC4-206ENST00000465903 DCCP43146 1447 aa37.56■■■■□ 3.6
SMC4-206ENST00000465903 WAPLQ7Z5K2 1190 aa37.53■■■■□ 3.6
SMC4-206ENST00000465903 L3MBTL2Q969R5 705 aa37.53■■■■□ 3.6
SMC4-206ENST00000465903 SIRT1Q96EB6 747 aa37.51■■■■□ 3.6
SMC4-206ENST00000465903 PLEKHH1Q9ULM0 1364 aa37.5■■■■□ 3.59
SMC4-206ENST00000465903 KIAA1210Q9ULL0 1709 aa37.47■■■■□ 3.59
SMC4-206ENST00000465903 MST1RQ04912 1400 aa37.46■■■■□ 3.59
SMC4-206ENST00000465903 DLC1Q96QB1 1528 aa37.43■■■■□ 3.58
SMC4-206ENST00000465903 TRAK1Q9UPV9 953 aa37.39■■■■□ 3.58
SMC4-206ENST00000465903 BRINP3Q76B58 766 aa37.37■■■■□ 3.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms