RNA–Protein interactions for RNA: ENST00000465864.1

KDM1A-203, Transcript of lysine demethylase 1A, humanhuman

TSL 5

Gene KDM1A, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-203ENST00000465864 IQGAP1P46940 1657 aa12.23□□□□□ -0.45
KDM1A-203ENST00000465864 SCAF11Q99590 1463 aaKnown RBP12.23□□□□□ -0.45
KDM1A-203ENST00000465864 NPHP4O75161 1426 aaPredicted RBP12.23□□□□□ -0.45
KDM1A-203ENST00000465864 ZNF335Q9H4Z2 1342 aaPredicted RBP12.22□□□□□ -0.45
KDM1A-203ENST00000465864 NEXMIFQ5QGS0 1516 aa12.21□□□□□ -0.45
KDM1A-203ENST00000465864 ACIN1Q9UKV3 1341 aaKnown RBP12.21□□□□□ -0.45
KDM1A-203ENST00000465864 RGL3Q3MIN7 710 aa12.21□□□□□ -0.45
KDM1A-203ENST00000465864 SLC26A8Q96RN1 970 aa12.21□□□□□ -0.45
KDM1A-203ENST00000465864 DMRT2Q9Y5R5 561 aa12.21□□□□□ -0.45
KDM1A-203ENST00000465864 SPATA31E1Q6ZUB1 1445 aa12.2□□□□□ -0.46
KDM1A-203ENST00000465864 DHX57Q6P158 1386 aaKnown RBP12.2□□□□□ -0.46
KDM1A-203ENST00000465864 LTBP4Q8N2S1 1624 aa12.2□□□□□ -0.46
KDM1A-203ENST00000465864 ZNF326Q5BKZ1 582 aaKnown RBP12.2□□□□□ -0.46
KDM1A-203ENST00000465864 EID1Q9Y6B2 187 aa12.2□□□□□ -0.46
KDM1A-203ENST00000465864 PPLO60437 1756 aa12.2□□□□□ -0.46
KDM1A-203ENST00000465864 SIN3AQ96ST3 1273 aa12.19□□□□□ -0.46
KDM1A-203ENST00000465864 IFT172Q9UG01 1749 aa12.19□□□□□ -0.46
KDM1A-203ENST00000465864 CCDC144AA2RUR9 1427 aa12.19□□□□□ -0.46
KDM1A-203ENST00000465864 NRXN3Q9Y4C0 1643 aa12.19□□□□□ -0.46
KDM1A-203ENST00000465864 ADAMTS13Q76LX8 1427 aa12.17□□□□□ -0.46
KDM1A-203ENST00000465864 PLEKHG1Q9ULL1 1385 aa12.17□□□□□ -0.46
KDM1A-203ENST00000465864 ADGRF5Q8IZF2 1346 aa12.16□□□□□ -0.46
KDM1A-203ENST00000465864 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.15□□□□□ -0.46
KDM1A-203ENST00000465864 CHD2O14647 1828 aaKnown RBP12.15□□□□□ -0.46
KDM1A-203ENST00000465864 XIRP1Q702N8 1843 aaKnown RBP12.14□□□□□ -0.47
KDM1A-203ENST00000465864 PPP1R15AO75807 674 aaPredicted RBP12.14□□□□□ -0.47
KDM1A-203ENST00000465864 BCANQ96GW7 911 aa12.14□□□□□ -0.47
KDM1A-203ENST00000465864 SETD1AO15047 1707 aaKnown RBP12.14□□□□□ -0.47
KDM1A-203ENST00000465864 PTPRUQ92729 1446 aa12.13□□□□□ -0.47
KDM1A-203ENST00000465864 CERKQ8TCT0 537 aa12.13□□□□□ -0.47
KDM1A-203ENST00000465864 TBX22Q9Y458 520 aa12.13□□□□□ -0.47
KDM1A-203ENST00000465864 RPGRIP1LQ68CZ1 1315 aa12.12□□□□□ -0.47
KDM1A-203ENST00000465864 HDGFP51858 240 aaKnown RBP12.12□□□□□ -0.47
KDM1A-203ENST00000465864 RBM33Q96EV2 1170 aaKnown RBP12.12□□□□□ -0.47
KDM1A-203ENST00000465864 SETBP1Q9Y6X0 1596 aa12.12□□□□□ -0.47
KDM1A-203ENST00000465864 METP08581 1390 aa12.11□□□□□ -0.47
KDM1A-203ENST00000465864 NEUROD1Q13562 356 aa12.11□□□□□ -0.47
KDM1A-203ENST00000465864 KDM2AQ9Y2K7 1162 aa12.11□□□□□ -0.47
KDM1A-203ENST00000465864 ALKQ9UM73 1620 aa12.11□□□□□ -0.47
KDM1A-203ENST00000465864 VGFO15240 615 aaPredicted RBP12.1□□□□□ -0.47
KDM1A-203ENST00000465864 KCNA6P17658 529 aa12.09□□□□□ -0.47
KDM1A-203ENST00000465864 DCAF11Q8TEB1 546 aa12.09□□□□□ -0.47
KDM1A-203ENST00000465864 LRRC7Q96NW7 1537 aa12.08□□□□□ -0.48
KDM1A-203ENST00000465864 NWD1Q149M9 1564 aa12.07□□□□□ -0.48
KDM1A-203ENST00000465864 CFAP70Q5T0N1 1121 aa12.07□□□□□ -0.48
KDM1A-203ENST00000465864 TMEM132EQ6IEE7 984 aa12.07□□□□□ -0.48
KDM1A-203ENST00000465864 L3MBTL2Q969R5 705 aa12.07□□□□□ -0.48
KDM1A-203ENST00000465864 AMOTL2Q9Y2J4 779 aa12.07□□□□□ -0.48
KDM1A-203ENST00000465864 NRXN1Q9ULB1 1477 aa12.07□□□□□ -0.48
KDM1A-203ENST00000465864 ASXL1Q8IXJ9 1541 aa12.06□□□□□ -0.48
KDM1A-203ENST00000465864 DIP2AQ14689 1571 aa12.06□□□□□ -0.48
KDM1A-203ENST00000465864 PIK3C2GO75747 1445 aa12.05□□□□□ -0.48
KDM1A-203ENST00000465864 XRN1Q8IZH2 1706 aaKnown RBP12.05□□□□□ -0.48
KDM1A-203ENST00000465864 CPS1P31327 1500 aa12.05□□□□□ -0.48
KDM1A-203ENST00000465864 MYOM2P54296 1465 aa12.04□□□□□ -0.48
KDM1A-203ENST00000465864 PROSER2Q86WR7 435 aaPredicted RBP12.04□□□□□ -0.48
KDM1A-203ENST00000465864 C14orf93Q9H972 538 aaKnown RBP12.04□□□□□ -0.48
KDM1A-203ENST00000465864 PIK3R4Q99570 1358 aa12.03□□□□□ -0.48
KDM1A-203ENST00000465864 NBPF8Q3BBV2 869 aa12.02□□□□□ -0.49
KDM1A-203ENST00000465864 TMEM94Q12767 1356 aa12.02□□□□□ -0.49
KDM1A-203ENST00000465864 NBPF1Q3BBV0 1214 aa12.01□□□□□ -0.49
KDM1A-203ENST00000465864 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
KDM1A-203ENST00000465864 STK26Q9P289 416 aa12.01□□□□□ -0.49
KDM1A-203ENST00000465864 ROBO2Q9HCK4 1378 aa12.01□□□□□ -0.49
KDM1A-203ENST00000465864 WAPLQ7Z5K2 1190 aa12□□□□□ -0.49
KDM1A-203ENST00000465864 NKTRP30414 1462 aaKnown RBP11.99□□□□□ -0.49
KDM1A-203ENST00000465864 ADGRB1O14514 1584 aa11.99□□□□□ -0.49
KDM1A-203ENST00000465864 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.98□□□□□ -0.49
KDM1A-203ENST00000465864 IQSEC2Q5JU85 1478 aa11.98□□□□□ -0.49
KDM1A-203ENST00000465864 PRAG1Q86YV5 1406 aa11.98□□□□□ -0.49
KDM1A-203ENST00000465864 PLEKHH1Q9ULM0 1364 aa11.98□□□□□ -0.49
KDM1A-203ENST00000465864 FBXO41Q8TF61 875 aa11.98□□□□□ -0.49
KDM1A-203ENST00000465864 YTHDC2Q9H6S0 1430 aaKnown RBP11.97□□□□□ -0.49
KDM1A-203ENST00000465864 UBAP1LF5GYI3 381 aa11.97□□□□□ -0.49
KDM1A-203ENST00000465864 NALCNQ8IZF0 1738 aa11.97□□□□□ -0.49
KDM1A-203ENST00000465864 LRPPRCP42704 1394 aaKnown RBP11.96□□□□□ -0.49
KDM1A-203ENST00000465864 CCER1Q8TC90 406 aaPredicted RBP11.96□□□□□ -0.49
KDM1A-203ENST00000465864 STAC3Q96MF2 364 aa11.96□□□□□ -0.49
KDM1A-203ENST00000465864 KNDC1Q76NI1 1749 aa11.96□□□□□ -0.49
KDM1A-203ENST00000465864 LAMC1P11047 1609 aa11.96□□□□□ -0.5
KDM1A-203ENST00000465864 TRPM1Q7Z4N2 1603 aa11.96□□□□□ -0.5
KDM1A-203ENST00000465864 ABCC11Q96J66 1382 aa11.95□□□□□ -0.5
KDM1A-203ENST00000465864 KIAA1210Q9ULL0 1709 aa11.95□□□□□ -0.5
KDM1A-203ENST00000465864 TRAK1Q9UPV9 953 aa11.95□□□□□ -0.5
KDM1A-203ENST00000465864 PIP4K2BP78356 416 aa11.94□□□□□ -0.5
KDM1A-203ENST00000465864 TECPR2O15040 1411 aa11.94□□□□□ -0.5
KDM1A-203ENST00000465864 PTCH1Q13635 1447 aa11.93□□□□□ -0.5
KDM1A-203ENST00000465864 ARHGEF28Q8N1W1 1705 aaKnown RBP11.92□□□□□ -0.5
KDM1A-203ENST00000465864 SAFB2Q14151 953 aaKnown RBP eCLIP11.92□□□□□ -0.5
KDM1A-203ENST00000465864 C19orf44Q9H6X5 657 aa11.92□□□□□ -0.5
KDM1A-203ENST00000465864 NCOA3Q9Y6Q9 1424 aa11.92□□□□□ -0.5
KDM1A-203ENST00000465864 TONSLQ96HA7 1378 aa11.92□□□□□ -0.5
KDM1A-203ENST00000465864 TOM1O60784 492 aa11.91□□□□□ -0.5
KDM1A-203ENST00000465864 PRAM1Q96QH2 718 aa11.91□□□□□ -0.5
KDM1A-203ENST00000465864 RGPD8O14715 1765 aaPredicted RBP11.91□□□□□ -0.5
KDM1A-203ENST00000465864 MSH6P52701 1360 aa11.91□□□□□ -0.5
KDM1A-203ENST00000465864 CLSPNQ9HAW4 1339 aa11.9□□□□□ -0.5
KDM1A-203ENST00000465864 C14orf37Q86TY3 774 aa11.9□□□□□ -0.5
KDM1A-203ENST00000465864 SIRT1Q96EB6 747 aa11.9□□□□□ -0.5
KDM1A-203ENST00000465864 SLAIN2Q9P270 581 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms