RNA–Protein interactions for RNA: ENST00000465864.1

KDM1A-203, Transcript of lysine demethylase 1A, humanhuman

TSL 5

Gene KDM1A, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-203ENST00000465864 NISCHQ9Y2I1 1504 aa20.08■□□□□ 0.81
KDM1A-203ENST00000465864 CCDC180Q9P1Z9 1646 aa17.75■□□□□ 0.43
KDM1A-203ENST00000465864 ABCC9O60706 1549 aa17.38■□□□□ 0.37
KDM1A-203ENST00000465864 DCAF8L2P0C7V8 631 aa16.78■□□□□ 0.28
KDM1A-203ENST00000465864 ZCCHC6Q5VYS8 1495 aaKnown RBP16.73■□□□□ 0.27
KDM1A-203ENST00000465864 NACADO15069 1562 aa16.66■□□□□ 0.26
KDM1A-203ENST00000465864 RB1CC1Q8TDY2 1594 aa16.66■□□□□ 0.26
KDM1A-203ENST00000465864 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
KDM1A-203ENST00000465864 DCAF1Q9Y4B6 1507 aa16.55■□□□□ 0.24
KDM1A-203ENST00000465864 UNC13AQ9UPW8 1703 aa16.45■□□□□ 0.22
KDM1A-203ENST00000465864 PABPN1Q86U42 306 aaKnown RBP eCLIP16.3■□□□□ 0.2
KDM1A-203ENST00000465864 BICRAQ9NZM4 1560 aa16.29■□□□□ 0.2
KDM1A-203ENST00000465864 SCRIBQ14160 1630 aa16.28■□□□□ 0.2
KDM1A-203ENST00000465864 DNAJC5BQ9UF47 199 aa16.01■□□□□ 0.15
KDM1A-203ENST00000465864 SHROOM4Q9ULL8 1493 aa15.99■□□□□ 0.15
KDM1A-203ENST00000465864 EIF4G1Q04637 1599 aaKnown RBP15.77■□□□□ 0.11
KDM1A-203ENST00000465864 CECR2Q9BXF3 1484 aa15.71■□□□□ 0.11
KDM1A-203ENST00000465864 CC2D2AQ9P2K1 1620 aa15.71■□□□□ 0.11
KDM1A-203ENST00000465864 AEBP2Q6ZN18 517 aaPredicted RBP15.7■□□□□ 0.1
KDM1A-203ENST00000465864 SMARCA4P51532 1647 aa15.56■□□□□ 0.08
KDM1A-203ENST00000465864 MROH2BQ7Z745 1585 aa15.53■□□□□ 0.08
KDM1A-203ENST00000465864 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
KDM1A-203ENST00000465864 ATAD2BQ9ULI0 1458 aa15.46■□□□□ 0.06
KDM1A-203ENST00000465864 NCAPD3P42695 1498 aa15.41■□□□□ 0.06
KDM1A-203ENST00000465864 WIZO95785 1651 aa15.39■□□□□ 0.05
KDM1A-203ENST00000465864 PEG3Q9GZU2 1588 aa15.37■□□□□ 0.05
KDM1A-203ENST00000465864 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
KDM1A-203ENST00000465864 RSF1Q96T23 1441 aaPredicted RBP15.36■□□□□ 0.05
KDM1A-203ENST00000465864 HMGXB3Q12766 1538 aa15.3■□□□□ 0.04
KDM1A-203ENST00000465864 BAZ1BQ9UIG0 1483 aaKnown RBP15.28■□□□□ 0.04
KDM1A-203ENST00000465864 TOP2AP11388 1531 aaKnown RBP15.12■□□□□ 0.01
KDM1A-203ENST00000465864 NESP48681 1621 aa15.12■□□□□ 0.01
KDM1A-203ENST00000465864 SUPT5HO00267 1087 aaKnown RBP15.06■□□□□ 0
KDM1A-203ENST00000465864 CCDC88BA6NC98 1476 aa15.01□□□□□ -0.01
KDM1A-203ENST00000465864 LAMC3Q9Y6N6 1575 aa14.96□□□□□ -0.01
KDM1A-203ENST00000465864 CADPSQ9ULU8 1353 aa14.96□□□□□ -0.02
KDM1A-203ENST00000465864 KIF21AQ7Z4S6 1674 aa14.92□□□□□ -0.02
KDM1A-203ENST00000465864 CFTRP13569 1480 aa14.9□□□□□ -0.02
KDM1A-203ENST00000465864 ERCC6Q03468 1493 aa14.88□□□□□ -0.03
KDM1A-203ENST00000465864 PDS5BQ9NTI5 1447 aa14.83□□□□□ -0.04
KDM1A-203ENST00000465864 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
KDM1A-203ENST00000465864 FANCD2Q9BXW9 1451 aa14.8□□□□□ -0.04
KDM1A-203ENST00000465864 THOC2Q8NI27 1593 aaKnown RBP14.8□□□□□ -0.04
KDM1A-203ENST00000465864 CEP164Q9UPV0 1460 aa14.74□□□□□ -0.05
KDM1A-203ENST00000465864 MRC2Q9UBG0 1479 aa14.7□□□□□ -0.06
KDM1A-203ENST00000465864 URB2Q14146 1524 aaKnown RBP14.7□□□□□ -0.06
KDM1A-203ENST00000465864 CUX2O14529 1486 aa14.68□□□□□ -0.06
KDM1A-203ENST00000465864 WDR62O43379 1518 aa14.66□□□□□ -0.06
KDM1A-203ENST00000465864 CHIC1Q5VXU3 224 aa14.66□□□□□ -0.06
KDM1A-203ENST00000465864 TOPBP1Q92547 1522 aa14.59□□□□□ -0.07
KDM1A-203ENST00000465864 CUX1P39880 1505 aa14.55□□□□□ -0.08
KDM1A-203ENST00000465864 DNMBPQ6XZF7 1577 aa14.55□□□□□ -0.08
KDM1A-203ENST00000465864 ABCC8Q09428 1581 aa14.52□□□□□ -0.08
KDM1A-203ENST00000465864 POLA1P09884 1462 aaPredicted RBP14.47□□□□□ -0.09
KDM1A-203ENST00000465864 RAD54L2Q9Y4B4 1467 aa14.46□□□□□ -0.09
KDM1A-203ENST00000465864 ZNF608Q9ULD9 1512 aaPredicted RBP14.46□□□□□ -0.1
KDM1A-203ENST00000465864 TARBP1Q13395 1621 aaKnown RBP14.45□□□□□ -0.1
KDM1A-203ENST00000465864 SYNJ1O43426 1573 aa14.45□□□□□ -0.1
KDM1A-203ENST00000465864 FGD5Q6ZNL6 1462 aa14.44□□□□□ -0.1
KDM1A-203ENST00000465864 WRNQ14191 1432 aaPredicted RBP eCLIP14.42□□□□□ -0.1
KDM1A-203ENST00000465864 IFT140Q96RY7 1462 aa14.42□□□□□ -0.1
KDM1A-203ENST00000465864 BIVM-ERCC5R4GMW8 1640 aa14.41□□□□□ -0.1
KDM1A-203ENST00000465864 SOGA1O94964 1423 aa14.41□□□□□ -0.1
KDM1A-203ENST00000465864 TOP2BQ02880 1626 aa14.4□□□□□ -0.1
KDM1A-203ENST00000465864 AQRO60306 1485 aaKnown RBP eCLIP14.38□□□□□ -0.112e-7■■■■□ 21.9
KDM1A-203ENST00000465864 TDRD9Q8NDG6 1382 aaKnown RBP14.35□□□□□ -0.11
KDM1A-203ENST00000465864 WDR97A6NE52 1622 aa14.35□□□□□ -0.11
KDM1A-203ENST00000465864 EIF4G3O43432 1585 aaKnown RBP14.34□□□□□ -0.11
KDM1A-203ENST00000465864 ABCA10Q8WWZ4 1543 aa14.28□□□□□ -0.12
KDM1A-203ENST00000465864 ABCA5Q8WWZ7 1642 aa14.24□□□□□ -0.13
KDM1A-203ENST00000465864 GAPVD1Q14C86 1478 aa14.23□□□□□ -0.13
KDM1A-203ENST00000465864 PBRM1Q86U86 1689 aa14.23□□□□□ -0.13
KDM1A-203ENST00000465864 DNAJC5Q9H3Z4 198 aa14.22□□□□□ -0.13
KDM1A-203ENST00000465864 CHD1O14646 1710 aa14.2□□□□□ -0.14
KDM1A-203ENST00000465864 SNAPC4Q5SXM2 1469 aa14.19□□□□□ -0.14
KDM1A-203ENST00000465864 GRIN2BQ13224 1484 aa14.18□□□□□ -0.14
KDM1A-203ENST00000465864 RUSC2Q8N2Y8 1516 aa14.16□□□□□ -0.14
KDM1A-203ENST00000465864 TRIM41Q8WV44 630 aa14.15□□□□□ -0.14
KDM1A-203ENST00000465864 FBLN2P98095 1184 aa14.14□□□□□ -0.15
KDM1A-203ENST00000465864 OSCARQ8IYS5 282 aa14.13□□□□□ -0.15
KDM1A-203ENST00000465864 MAGI1Q96QZ7 1491 aaPredicted RBP14.12□□□□□ -0.15
KDM1A-203ENST00000465864 IGF1RP08069 1367 aa14.1□□□□□ -0.15
KDM1A-203ENST00000465864 ERICH3Q5RHP9 1530 aa14.1□□□□□ -0.15
KDM1A-203ENST00000465864 SYNJ2O15056 1496 aa14.08□□□□□ -0.16
KDM1A-203ENST00000465864 CHMP7Q8WUX9 453 aaPredicted RBP14.08□□□□□ -0.16
KDM1A-203ENST00000465864 ADAMTS12P58397 1594 aa14.08□□□□□ -0.16
KDM1A-203ENST00000465864 KIF27Q86VH2 1401 aa14.07□□□□□ -0.16
KDM1A-203ENST00000465864 FHAD1B1AJZ9 1412 aa14.04□□□□□ -0.16
KDM1A-203ENST00000465864 GRIN2AQ12879 1464 aa14.03□□□□□ -0.16
KDM1A-203ENST00000465864 CEP170Q5SW79 1584 aa14□□□□□ -0.17
KDM1A-203ENST00000465864 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
KDM1A-203ENST00000465864 CARMIL1Q5VZK9 1371 aa13.98□□□□□ -0.17
KDM1A-203ENST00000465864 CUL7Q14999 1698 aa13.97□□□□□ -0.17
KDM1A-203ENST00000465864 NUP160Q12769 1436 aa13.97□□□□□ -0.17
KDM1A-203ENST00000465864 RIMBP3CA6NJZ7 1639 aa13.95□□□□□ -0.18
KDM1A-203ENST00000465864 RIMBP3BA6NNM3 1639 aa13.95□□□□□ -0.18
KDM1A-203ENST00000465864 RIMBP3Q9UFD9 1639 aa13.95□□□□□ -0.18
KDM1A-203ENST00000465864 FAM9AQ8IZU1 332 aaPredicted RBP13.95□□□□□ -0.18
KDM1A-203ENST00000465864 ARHGEF11O15085 1522 aa13.92□□□□□ -0.18
KDM1A-203ENST00000465864 CSRNP3Q8WYN3 585 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms